CuGenDBv2

Gene ID	Lag0014710
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	PAP_fibrillin domain-containing protein
Genome location	chr12:3826868..3833291
RNA-Seq Expression	Lag0014710
Synteny	Lag0014710
Gene Ontology terms	NA
InterPro domains	IPR006843 - Plastid lipid-associated protein/fibrillin conserved domain IPR019825 - Legume lectin, beta chain, Mn/Ca-binding site IPR026960 - Reverse transcriptase zinc-binding domain IPR039633 - Plastid-lipid-associated protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588812.1 putative plastid-lipid-associated protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-29

97.18

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTANLKPLNT KVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

KAG7022580.1 putative plastid-lipid-associated protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-29

97.18

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTANLKPLNT KVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

XP_022156963.1 probable plastid-lipid-associated protein 4, chloroplastic [Momordica charantia]

1.9e-29

97.18

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTANL PLNTRKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

XP_023532027.1 probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp. pepo]

3.8e-30

98.59

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

XP_038887592.1 probable plastid-lipid-associated protein 4, chloroplastic [Benincasa hispida]

1.1e-29

97.18

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTANLKPLN+RKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M3B4 PAP_fibrillin domain-containing protein

2.0e-29

95.77

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTA+LKPLN+RKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

A0A1S4DUY7 probable plastid-lipid-associated protein 4, chloroplastic isoform X2

4.5e-29

94.37

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTA+LKPLN+RKVAVQFDTFKILGLIPVKAPGRARGEL+IT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

A0A444WZC9 Uncharacterized protein

2.0e-29

66.37

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Query:  DGVIGQQEIILPDSFHLSNGEKKGTFERPTYTGMVFVKMTPMVTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLF
        D +  + E + P    L +    G +E   YT    +  T  VTANL PLN RKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELR+SRGDKGNLF
Subjt:  DGVIGQQEIILPDSFHLSNGEKKGTFERPTYTGMVFVKMTPMVTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLF

Query:  ILKMIDPSYRVPV
        ILKM+DPSYRVPV
Subjt:  ILKMIDPSYRVPV

A0A6J1DS61 probable plastid-lipid-associated protein 4, chloroplastic

9.0e-30

97.18

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTANL PLNTRKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

A0A6J1JGL8 probable plastid-lipid-associated protein 4, chloroplastic

1.2e-29

95.77

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VTANLKPLNT KVAVQFDTFKILGLIP+KAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYRVPV
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

SwissProt top hits

e value

%identity

Alignment

Q6DBN2 Probable plastid-lipid-associated protein 5, chloroplastic

8.2e-20

68.06

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAP-GRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VT +L PLN++ VAV+   FKILG IPVKAP G ARGELEIT++DEELRISRG    LFILKM DP+YR+P+
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAP-GRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

Q9LU85 Probable plastid-lipid-associated protein 4, chloroplastic

1.4e-24

71.83

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VT ++KPLN++KVAV+   FKILG IP+KAP  ARGELEIT++DEELR+SRGDKGNLFILKM DP+YR+P+
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

Arabidopsis top hits

e value

%identity

Alignment

AT3G26070.1 Plastid-lipid associated protein PAP / fibrillin family protein

1.0e-25

71.83

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VT ++KPLN++KVAV+   FKILG IP+KAP  ARGELEIT++DEELR+SRGDKGNLFILKM DP+YR+P+
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

AT3G26080.1 plastid-lipid associated protein PAP / fibrillin family protein

5.8e-21

68.06

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Query:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAP-GRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
        VT +L PLN++ VAV+   FKILG IPVKAP G ARGELEIT++DEELRISRG    LFILKM DP+YR+P+
Subjt:  VTANLKPLNTRKVAVQFDTFKILGLIPVKAP-GRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

Sequences

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CDS sequence

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ATGCCTCTCCCTCCTCCAGGGACTTCCATTTTCTCCTTTTTGTGGAAGGTCAAAATCCCCAAGAAAGTGAAGTTCTTTGCCTGGGAAGTTTTACATGGTTGGGTGAATAC
TCGGGATCAGATCCAAAGTTGTATTTTGATAGAGGCCCAAGCTGTTAAGATCAAGAACAAATTATCAAGGAATCAATGTAGATACACTCAGAGCTCAAAATATGGAATCT
TGGCCATTCTTCAACCAGATGGAGTCATAGGCCAACAGGAAATAATTCTGCCAGATAGCTTTCATCTTTCCAATGGGGAGAAAAAAGGAACTTTTGAGCGTCCAACTTAC
ACCGGCATGGTGTTTGTCAAGATGACACCAATGGTCACAGCAAACTTGAAACCTTTAAACACAAGGAAAGTTGCTGTTCAATTTGACACATTCAAAATTCTTGGTCTGAT
ACCAGTGAAAGCACCAGGAAGAGCCCGTGGTGAACTGGAAATCACATTTTTGGATGAAGAGCTACGAATATCCAGAGGTGACAAGGGGAACCTCTTTATCTTGAAGATGA
TCGATCCGTCTTATCGAGTACCCGTGTAA

mRNA sequence

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Protein sequence

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MPLPPPGTSIFSFLWKVKIPKKVKFFAWEVLHGWVNTRDQIQSCILIEAQAVKIKNKLSRNQCRYTQSSKYGILAILQPDGVIGQQEIILPDSFHLSNGEKKGTFERPTY
TGMVFVKMTPMVTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV

Lag0014710 (gene) of Sponge gourd (AG-4) v1 genome