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Lag0014760 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014760
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:4429988..4431219
RNA-Seq ExpressionLag0014760
SyntenyLag0014760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-5066.88Show/hide
Query:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLV+L+ FEPL+DATS+L QI+KDAD +FT     +IASH+SPRFVATLQMSCR FTNYS+DH + S++SLESFHDAMLDGGS+SSM++H+LE+  QM+
Subjt:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFD-ASGHAPPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQAD
        LR++  S + PPLH EL LSP Q E  LGQV YGK+F V+SK LR+IIKELPLF  D
Subjt:  LRFD-ASGHAPPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQAD

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]3.2e-5368.99Show/hide
Query:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRLE FEPL+DATS+LAQ+AKDAD KFTP   +II S+ SP+FVATLQ+S R FTN+S+DHN  S++SL+ FHDAMLDGGS+SSMT+HLL+  NQMV
Subjt:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGH-APPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS
        LRF+   H  PPLHHEL LSP Q E+ LGQV YG +F V S+ELRRIIKELPLF  D+
Subjt:  LRFDASGH-APPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]7.3e-5064.97Show/hide
Query:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRL++F+PL DATS LAQIA++AD KFTP  F IIAS+ SPRFVA LQM+   F NY +D++H SRISLESFHDA+LDGG+  SMT+HLL NI Q++
Subjt:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGHAPPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS
        LRF++S HAP +HHEL+L+PSQEED LG+V Y K+F + SK+LRR+I+ LP+F  DS
Subjt:  LRFDASGHAPPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]4.7e-4965.43Show/hide
Query:  MFLVRLENFEPLVDATSILAQIA-KDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM
        MFLV+L NF+PL+DATS  AQI+  DAD KFTP+KF II+SH SPRF+ATLQ+S ++FT++S+DH+H S++SLESFHDA+LDGGS++SMT+HLL+  NQ+
Subjt:  MFLVRLENFEPLVDATSILAQIA-KDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM

Query:  VLRFDA-SGHAPPLHHELTLSPSQEED-ILGQ--VAYGKYFIVHSKELRRIIKELPLFQADS
        +LRFD  S    PLHHEL LSP Q ED  +GQ  +  GKYFIV SK LRRIIKELP+FQ DS
Subjt:  VLRFDA-SGHAPPLHHELTLSPSQEED-ILGQ--VAYGKYFIVHSKELRRIIKELPLFQADS

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]1.2e-4965.62Show/hide
Query:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLV+L NFEPL+DATS LAQI+  AD KFTP +F +IA + SPRFVATLQ+S + FTNYS+DH H S++ LESFHDA+LDGGS++SMT+HLLE  NQM+
Subjt:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDA-SGHAPPLHHELTLSPSQ--EEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS
        LRF   S   PPLHHELT SP Q  + +I GQ+  GK+FIV S+ LRRIIKELP+FQ DS
Subjt:  LRFDA-SGHAPPLHHELTLSPSQ--EEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein2.3e-4965.43Show/hide
Query:  MFLVRLENFEPLVDATSILAQIA-KDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM
        MFLV+L NF+PL+DATS  AQI+  DAD KFTP+KF II+SH SPRF+ATLQ+S ++FT++S+DH+H S++SLESFHDA+LDGGS++SMT+HLL+  NQ+
Subjt:  MFLVRLENFEPLVDATSILAQIA-KDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM

Query:  VLRFDA-SGHAPPLHHELTLSPSQEED-ILGQ--VAYGKYFIVHSKELRRIIKELPLFQADS
        +LRFD  S    PLHHEL LSP Q ED  +GQ  +  GKYFIV SK LRRIIKELP+FQ DS
Subjt:  VLRFDA-SGHAPPLHHELTLSPSQEED-ILGQ--VAYGKYFIVHSKELRRIIKELPLFQADS

A0A1S3C8J1 uncharacterized protein LOC1034980101.5e-5368.99Show/hide
Query:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRLE FEPL+DATS+LAQ+AKDAD KFTP   +II S+ SP+FVATLQ+S R FTN+S+DHN  S++SL+ FHDAMLDGGS+SSMT+HLL+  NQMV
Subjt:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGH-APPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS
        LRF+   H  PPLHHEL LSP Q E+ LGQV YG +F V S+ELRRIIKELPLF  D+
Subjt:  LRFDASGH-APPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS

A0A1S3CL88 uncharacterized protein LOC1035022506.7e-4966.05Show/hide
Query:  MFLVRLENFEPLVDATSILAQIAKD-ADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM
        MFLV+L+NF+PL+DATS LAQI+ D AD KFTP+KF IIASH SPRF+ATLQ+S ++FT +S+D++H S++SLESFHDA+LDGGS++SMT+HLL+  NQM
Subjt:  MFLVRLENFEPLVDATSILAQIAKD-ADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM

Query:  VLRFDA-SGHAPPLHHELTLSPSQEED-ILGQ--VAYGKYFIVHSKELRRIIKELPLFQADS
        +LRFD  S    PLHHELTLSP Q ED  +GQ  +   KYFIV SK LRRIIK+LP+FQ DS
Subjt:  VLRFDA-SGHAPPLHHELTLSPSQEED-ILGQ--VAYGKYFIVHSKELRRIIKELPLFQADS

A0A1S4E4N8 uncharacterized protein LOC1035022633.5e-5064.97Show/hide
Query:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRL++F+PL DATS LAQIA++AD KFTP  F IIAS+ SPRFVA LQM+   F NY +D++H SRISLESFHDA+LDGG+  SMT+HLL NI Q++
Subjt:  MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGHAPPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS
        LRF++S HAP +HHEL+L+PSQEED LG+V Y K+F + SK+LRR+I+ LP+F  DS
Subjt:  LRFDASGHAPPLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADS

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein6.7e-4966.05Show/hide
Query:  MFLVRLENFEPLVDATSILAQIAKD-ADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM
        MFLV+L+NF+PL+DATS LAQI+ D AD KFTP+KF IIASH SPRF+ATLQ+S ++FT +S+D++H S++SLESFHDA+LDGGS++SMT+HLL+  NQM
Subjt:  MFLVRLENFEPLVDATSILAQIAKD-ADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM

Query:  VLRFDA-SGHAPPLHHELTLSPSQEED-ILGQ--VAYGKYFIVHSKELRRIIKELPLFQADS
        +LRFD  S    PLHHELTLSP Q ED  +GQ  +   KYFIV SK LRRIIK+LP+FQ DS
Subjt:  VLRFDA-SGHAPPLHHELTLSPSQEED-ILGQ--VAYGKYFIVHSKELRRIIKELPLFQADS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCAGGCTGGAGAACTTTGAACCTCTTGTGGATGCAACCTCCATACTCGCTCAAATCGCCAAGGATGCCGACGCCAAATTCACTCCGACGAAGTTCTTGAT
CATCGCCTCGCACAGTTCCCCTCGGTTCGTCGCGACGCTGCAGATGTCGTGTCGATTCTTCACGAACTATTCGATCGATCATAATCACGTTTCGAGGATCTCCCTTGAAT
CCTTCCATGATGCTATGTTGGATGGAGGGAGTTACTCTTCAATGACAATGCATCTTCTTGAAAACATAAATCAAATGGTCCTTAGGTTTGATGCTTCAGGGCATGCGCCA
CCGTTGCATCACGAATTGACATTGTCGCCTTCGCAAGAAGAGGATATATTAGGTCAAGTTGCATATGGGAAATATTTCATAGTTCATTCTAAAGAATTAAGACGTATTAT
AAAAGAATTGCCACTCTTCCAAGCGGATTCAGGTCTGTGGCTTGAATCCGAACACCTAATACCAGAGATCGATGCAAACGTTTTCCAATTGGACAATCATTGGTGGATAG
GTGAGCATGATAAGTTCTACTTACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTCAGGCTGGAGAACTTTGAACCTCTTGTGGATGCAACCTCCATACTCGCTCAAATCGCCAAGGATGCCGACGCCAAATTCACTCCGACGAAGTTCTTGAT
CATCGCCTCGCACAGTTCCCCTCGGTTCGTCGCGACGCTGCAGATGTCGTGTCGATTCTTCACGAACTATTCGATCGATCATAATCACGTTTCGAGGATCTCCCTTGAAT
CCTTCCATGATGCTATGTTGGATGGAGGGAGTTACTCTTCAATGACAATGCATCTTCTTGAAAACATAAATCAAATGGTCCTTAGGTTTGATGCTTCAGGGCATGCGCCA
CCGTTGCATCACGAATTGACATTGTCGCCTTCGCAAGAAGAGGATATATTAGGTCAAGTTGCATATGGGAAATATTTCATAGTTCATTCTAAAGAATTAAGACGTATTAT
AAAAGAATTGCCACTCTTCCAAGCGGATTCAGGTCTGTGGCTTGAATCCGAACACCTAATACCAGAGATCGATGCAAACGTTTTCCAATTGGACAATCATTGGTGGATAG
GTGAGCATGATAAGTTCTACTTACATTGA
Protein sequenceShow/hide protein sequence
MFLVRLENFEPLVDATSILAQIAKDADAKFTPTKFLIIASHSSPRFVATLQMSCRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMVLRFDASGHAP
PLHHELTLSPSQEEDILGQVAYGKYFIVHSKELRRIIKELPLFQADSGLWLESEHLIPEIDANVFQLDNHWWIGEHDKFYLH