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Lag0014762 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014762
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 9
Genome locationchr12:4444669..4446454
RNA-Seq ExpressionLag0014762
SyntenyLag0014762
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574160.1 Mediator of RNA polymerase II transcription subunit 9, partial [Cucurbita argyrosperma subsp. sororia]3.1e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
XP_011652352.2 mediator of RNA polymerase II transcription subunit 9 [Cucumis sativus]2.3e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
XP_016900408.1 PREDICTED: mediator of RNA polymerase II transcription subunit 9, partial [Cucumis melo]2.3e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
XP_022944890.1 mediator of RNA polymerase II transcription subunit 9-like [Cucurbita moschata]3.1e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
XP_038903145.1 mediator of RNA polymerase II transcription subunit 9 [Benincasa hispida]3.1e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
TrEMBL top hitse value%identityAlignment
A0A0A0LDE7 Mediator of RNA polymerase II transcription subunit 91.1e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
A0A1S4DWQ6 Mediator of RNA polymerase II transcription subunit 91.1e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
A0A6J1D301 Mediator of RNA polymerase II transcription subunit 99.6e-0886.49Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTV+GQKKKLEEH+QLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
A0A6J1FZC2 mediator of RNA polymerase II transcription subunit 9-like1.5e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
A0A6J1HX54 Mediator of RNA polymerase II transcription subunit 91.5e-0891.89Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
        MTVEGQKKKLEEHEQLL HRRELIGKYKNSVEE +KG
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55080.1 MED92.2e-0460.61Show/hide
Query:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEE
        MTV+GQK+ +EE EQLL  RR+LI +Y+ S+EE
Subjt:  MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTAGAGGGACAGAAGAAAAAGCTGGAAGAACATGAGCAGTTGTTAATTCATCGAAGGGAACTGATTGGCAAGTATAAGAATTCTGTTGAAGAGCCTTTAAAGGG
TGTTACTTTTGATTGCTGCACAAATAGTTACACCGTCAACAGATTTTTTGAGCCGGTCTGGCTAGCATCATTTACCCTTGAAGGGATGCCAAAAGAGCTTTTCCCTGAGT
CGTGCAATTCCATGGAGTGGCTTTTATATCTAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTAGAGGGACAGAAGAAAAAGCTGGAAGAACATGAGCAGTTGTTAATTCATCGAAGGGAACTGATTGGCAAGTATAAGAATTCTGTTGAAGAGCCTTTAAAGGG
TGTTACTTTTGATTGCTGCACAAATAGTTACACCGTCAACAGATTTTTTGAGCCGGTCTGGCTAGCATCATTTACCCTTGAAGGGATGCCAAAAGAGCTTTTCCCTGAGT
CGTGCAATTCCATGGAGTGGCTTTTATATCTAATCTGA
Protein sequenceShow/hide protein sequence
MTVEGQKKKLEEHEQLLIHRRELIGKYKNSVEEPLKGVTFDCCTNSYTVNRFFEPVWLASFTLEGMPKELFPESCNSMEWLLYLI