; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014771 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014771
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpentatricopeptide repeat-containing protein At2g15690, mitochondrial-like
Genome locationchr12:4492523..4497415
RNA-Seq ExpressionLag0014771
SyntenyLag0014771
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588655.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8584.08Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNF PPPQQHSSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER
        DYV QGS NNQM+YR +N +SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQGYPQFG PGQ NPQVE   R
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER

Query:  V
        +
Subjt:  V

KAG7013281.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-8583.58Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDF NF PPPQQHSSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER
        DYV QGS NNQM+YR +N +SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQGYPQFG PGQ NPQVE   R
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER

Query:  V
        +
Subjt:  V

XP_022927876.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita moschata]5.8e-8786.22Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRRARTPILIS F KVRS LPSRF FSC NQTETLIKAL TSA PNDFSNFPPPPQQHSSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVE
        DYVQQGS NNQMNYR +N +SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQGYPQFG PGQ NPQVE
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVE

XP_022988718.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X2 [Cucurbita maxima]1.9e-8283.16Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNFPPPPQQHSSSDPR+ Q QWGSPSQVH  SGNFNNQSFSEF NR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVE
        DYV QGS NNQ+NYR +N +SHPNPG SRQGQ Y+  GNPNSW+P N+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQGYPQFG PGQ  PQVE
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVE

XP_023530084.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita pepo subsp. pepo]8.4e-8682.04Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNFPPPPQQ SSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER
        DYV QGS NNQMNYR +N +SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQR PNQWNNQNQGYPQFG PGQ NPQVE   +
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER

Query:  VGEGRG
        +    G
Subjt:  VGEGRG

TrEMBL top hitse value%identityAlignment
A0A6J1EIR6 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like2.8e-8786.22Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRRARTPILIS F KVRS LPSRF FSC NQTETLIKAL TSA PNDFSNFPPPPQQHSSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVE
        DYVQQGS NNQMNYR +N +SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQGYPQFG PGQ NPQVE
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVE

A0A6J1GL94 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like3.6e-8280.58Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRR RTPI ISSF KVRSPLPS FTFSC N+TETLIKALSTSA P+DFSNFP PPQQ SSSDPRY QGQWGSPSQVH  SGNFNNQSFSEFQNR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER
        DYVQQGSP+NQMNYR QN +S+PNPGF RQGQSYTQ GNPNSWNPPN+SYPQYQNP Q N QNFNY QQR PNQW+NQNQG PQFG PGQRN Q E   +
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER

Query:  VGEGRG
        +    G
Subjt:  VGEGRG

A0A6J1I4R8 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like2.4e-7879.13Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRR RTPI ISSF KVRSPLPS FTFSC NQTETLIKALSTSA P+DFSNFP PPQQ SSS PRY QGQ GSPSQVH  SGNFNNQSFSEFQNR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER
        DYVQ GSP+NQMN R QN +S+PNPGF RQGQSYTQ GNPNSWNPPN+SYPQYQNP Q N QNFNY QQR PNQW+NQNQG PQFG PGQRN Q E   +
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER

Query:  VGEGRG
        +    G
Subjt:  VGEGRG

A0A6J1JDU2 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X11.6e-8279.61Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNFPPPPQQHSSSDPR+ Q QWGSPSQVH  SGNFNNQSFSEF NR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER
        DYV QGS NNQ+NYR +N +SHPNPG SRQGQ Y+  GNPNSW+P N+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQGYPQFG PGQ  PQVE   +
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDER

Query:  VGEGRG
        +    G
Subjt:  VGEGRG

A0A6J1JN43 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X29.4e-8383.16Show/hide
Query:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR
        MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNFPPPPQQHSSSDPR+ Q QWGSPSQVH  SGNFNNQSFSEF NR
Subjt:  MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNR

Query:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVE
        DYV QGS NNQ+NYR +N +SHPNPG SRQGQ Y+  GNPNSW+P N+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQGYPQFG PGQ  PQVE
Subjt:  DYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCTTATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTCCTTCTTCAAGGTACGGTCTCCTCTCCCTTCTCGTTTCACCTTCTCTTGCGAAAACCA
GACAGAGACTCTAATCAAAGCCCTAAGCACCTCCGCAATCCCTAATGATTTCTCAAATTTTCCTCCTCCGCCGCAACAACATTCTTCATCCGACCCTCGATATCATCAGG
GCCAGTGGGGCTCGCCGAGCCAGGTTCATCCTTCGAGTGGAAATTTTAATAACCAGTCGTTCTCGGAGTTTCAGAATCGCGACTATGTTCAACAGGGAAGCCCTAATAAT
CAAATGAATTATCGGGGTCAGAACCACAACTCTCACCCGAATCCTGGATTTTCCCGGCAGGGTCAGAGCTATACTCAAACCGGTAACCCAAATTCGTGGAATCCTCCGAA
TCGGAGCTACCCGCAGTATCAAAATCCTCCGCAGCAGAACAGTCAAAATTTCAATTATCCGCAACAAAGAGGGCCAAACCAATGGAACAATCAAAATCAGGGATACCCTC
AATTTGGAATGCCTGGACAGCGGAACCCACAAGTTGAAGAAGATGAAAGGGTGGGTGAAGGCCGAGGCGCTGTCGAGGCCGGAGGTGGGTTCGTCGAGGAGCAGAACGAC
GGGGTCGTGGAGGAGGCTGAGGCCGATGGAGACGCTCCGGAGAGGCCGGAGATGAGACGGGTGTTGGCGAAGTGGGAAAGGCAGAGGTCGGCGAGCAGGGAGTCGACGGT
GGTCGGGATTTGGGATTTTTGGGGAGGAGGAGGCGGGCGGCGAAGGCGAAGCAGAAGGACCAAAAGTTTGCCAAGTTCATCCATCCCCCCTAGAAGAAAGACAGAATCAG
CTCTGACTCAGAGCCATTACTACACAGCAGAGACTGCAGTTGATACTGCTATCTCCATTCCTCTTACTGCCTCAGATAGTGATGTTTCAGACCATAAACCTGAAAGAGAT
GGCATCACTCTGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTCTTATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTCCTTCTTCAAGGTACGGTCTCCTCTCCCTTCTCGTTTCACCTTCTCTTGCGAAAACCA
GACAGAGACTCTAATCAAAGCCCTAAGCACCTCCGCAATCCCTAATGATTTCTCAAATTTTCCTCCTCCGCCGCAACAACATTCTTCATCCGACCCTCGATATCATCAGG
GCCAGTGGGGCTCGCCGAGCCAGGTTCATCCTTCGAGTGGAAATTTTAATAACCAGTCGTTCTCGGAGTTTCAGAATCGCGACTATGTTCAACAGGGAAGCCCTAATAAT
CAAATGAATTATCGGGGTCAGAACCACAACTCTCACCCGAATCCTGGATTTTCCCGGCAGGGTCAGAGCTATACTCAAACCGGTAACCCAAATTCGTGGAATCCTCCGAA
TCGGAGCTACCCGCAGTATCAAAATCCTCCGCAGCAGAACAGTCAAAATTTCAATTATCCGCAACAAAGAGGGCCAAACCAATGGAACAATCAAAATCAGGGATACCCTC
AATTTGGAATGCCTGGACAGCGGAACCCACAAGTTGAAGAAGATGAAAGGGTGGGTGAAGGCCGAGGCGCTGTCGAGGCCGGAGGTGGGTTCGTCGAGGAGCAGAACGAC
GGGGTCGTGGAGGAGGCTGAGGCCGATGGAGACGCTCCGGAGAGGCCGGAGATGAGACGGGTGTTGGCGAAGTGGGAAAGGCAGAGGTCGGCGAGCAGGGAGTCGACGGT
GGTCGGGATTTGGGATTTTTGGGGAGGAGGAGGCGGGCGGCGAAGGCGAAGCAGAAGGACCAAAAGTTTGCCAAGTTCATCCATCCCCCCTAGAAGAAAGACAGAATCAG
CTCTGACTCAGAGCCATTACTACACAGCAGAGACTGCAGTTGATACTGCTATCTCCATTCCTCTTACTGCCTCAGATAGTGATGTTTCAGACCATAAACCTGAAAGAGAT
GGCATCACTCTGGCTTAA
Protein sequenceShow/hide protein sequence
MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNN
QMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDERVGEGRGAVEAGGGFVEEQND
GVVEEAEADGDAPERPEMRRVLAKWERQRSASRESTVVGIWDFWGGGGGRRRRSRRTKSLPSSSIPPRRKTESALTQSHYYTAETAVDTAISIPLTASDSDVSDHKPERD
GITLA