CuGenDBv2

Gene ID	Lag0014839
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Genome location	chr12:5125859..5129487
RNA-Seq Expression	Lag0014839
Synteny	Lag0014839
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

9.2e-96

91.5

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALLAKQMESLQL FSSIKKTMEELGNIV+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQLVKGGSN PS+KQLQQ+VGLKPSLEDCLNGLMLLC MHRSEY+LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEEVEF+FDTILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

XP_008447827.1 PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]

7.7e-95

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQLVKGGSN PS+KQLQQRVGLKPSLEDCLNGLM+LC+MHRSEY LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEEV+F+FDTILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

XP_016900442.1 PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]

2.8e-92

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQLVKGGSN PS+KQLQQRVGLKPSLEDCLNGLM+LC+MHRS+  LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEEV+F+FDTILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

XP_022928127.1 uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]

7.0e-96

92.5

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEYHLKES+VSALPELFWK RNHSAQDLSSL QLLVDQPNIRKEEVEFIFDTILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

XP_022989465.1 uncharacterized protein At5g43822 isoform X2 [Cucurbita maxima]

3.3e-93

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMD WDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEY+LKES+VSALP+LFWK RNHSAQDLSSL QLLVDQPNIRKEEVEF+FD ILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

4.4e-96

91.5

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALLAKQMESLQL FSSIKKTMEELGNIV+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQLVKGGSN PS+KQLQQ+VGLKPSLEDCLNGLMLLC MHRSEY+LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEEVEF+FDTILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

A0A1S3BIA7 uncharacterized protein At5g43822 isoform X1

3.8e-95

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQLVKGGSN PS+KQLQQRVGLKPSLEDCLNGLM+LC+MHRSEY LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEEV+F+FDTILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

A0A1S4DWT4 uncharacterized protein At5g43822 isoform X2

1.3e-92

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQLVKGGSN PS+KQLQQRVGLKPSLEDCLNGLM+LC+MHRS+  LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEEV+F+FDTILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

A0A6J1EJ12 uncharacterized protein At5g43822 isoform X3

3.4e-96

92.5

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEYHLKES+VSALPELFWK RNHSAQDLSSL QLLVDQPNIRKEEVEFIFDTILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

A0A6J1JMF9 uncharacterized protein At5g43822 isoform X2

1.6e-93

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEAMVKKYQQRFRKFKDEMD WDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEY+LKES+VSALP+LFWK RNHSAQDLSSL QLLVDQPNIRKEEVEF+FD ILV EA
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

2.9e-44

49.25

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  +YG+L  + GI DA++ +QM  L+ +  S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSE
        G QL +  S   S +++++R+G+KP + DCL GL +L DMH+SEYHLK SI+S L  L  K    S  DL++L  L+VDQPNI K+EV+ IFD I   E
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSE

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

2.1e-45

49.25

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  +YG+L  + GI DA++ +QM  L+ +  S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSE
        G QL +  S   S +++++R+G+KP + DCL GL +L DMH+SEYHLK SI+S L  L  K    S  DL++L  L+VDQPNI K+EV+ IFD I   E
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCCATGGTGAAAAAGTACCAGCAAAGATTCAGAAAGTTCAAAGATGAAATGGATCGCTGGGACGAGCTTCAAGTTCGTTTGATTTCGCAGTTCAAGAATGCTTC
CTCCATCATTGGGAGGTTGCAGGTGCTTCAAGATCCTAAGAATTATGGCAGTCTCTCTGGCATGGATGGCATTATAGATGCGCTATTGGCAAAGCAGATGGAATCCTTGC
AACTCATTTTCTCATCTATCAAAAAAACAATGGAAGAACTTGGGAATATTGTCCATTCCATGGAGAAGATTAATCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCTAAT
CCTCCATCAATGAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGTCTTGAAGATTGCTTGAACGGGTTAATGCTTCTATGTGACATGCACCGCTCTGAGTACCATCT
TAAAGAATCTATTGTCTCAGCACTTCCAGAACTTTTCTGGAAAGCCAGGAATCATAGTGCCCAAGATCTCAGTTCCTTGCATCAACTTCTGGTTGATCAACCCAACATTC
GAAAAGAGGAAGTTGAATTCATCTTTGACACCATACTGGTCTCGGAAGCCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKINRDGKQLVKGGSN
PPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVSEA

Lag0014839 (gene) of Sponge gourd (AG-4) v1 genome