; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014843 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014843
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSingle-stranded DNA-binding protein, mitochondrial
Genome locationchr12:5161529..5164133
RNA-Seq ExpressionLag0014843
SyntenyLag0014843
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAR42478.1 putative papain-like cysteine prorease [Plasmodium vivax]1.5e-0435.38Show/hide
Query:  RSTSQPTDQ-----EDQQVSRPIIQEINKPTDPKITSTADQEINKSQPIIQE-DQQANKPIQQITSQQAD-PRDQQVNRPIIRDQQANTDQQINKPTADP
        +ST +P DQ      DQ    P+ Q  ++P D  +T + DQ     +P+ Q  DQ A +P+ Q T Q AD P DQ  ++P+ +     T+Q  ++PT  P
Subjt:  RSTSQPTDQ-----EDQQVSRPIIQEINKPTDPKITSTADQEINKSQPIIQE-DQQANKPIQQITSQQAD-PRDQQVNRPIIRDQQANTDQQINKPTADP

Query:  RDQQVTTDHPEDQQANKPIQEIISQQADHP
         DQ  TTD P +Q   +P  E ++Q  D P
Subjt:  RDQQVTTDHPEDQQANKPIQEIISQQADHP

RUS92128.1 hypothetical protein EGW08_000152 [Elysia chlorotica]6.1e-0636.76Show/hide
Query:  PSRRIQSPENQDEIKIKPIQRSQANSRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTDPKITSTADQEINK---SQPIIQEDQQANKPIQQITSQQA
        P+  I+ P N   +        + N  + + T++PTDQ+      QQ +RP  Q+ N+P D +    ADQ+ N+    Q     DQQAN+P  Q T++  
Subjt:  PSRRIQSPENQDEIKIKPIQRSQANSRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTDPKITSTADQEINK---SQPIIQEDQQANKPIQQITSQQA

Query:  D-----PRDQQVNRPIIRDQQAN--TDQQINKP----TADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRSTIPIGRSRRSS
        D     P DQQ +RP   DQQ N  TDQQ N+P    T  P DQQ  T+ P DQQ N+P   ++   +D   R T  + RSRR S
Subjt:  D-----PRDQQVNRPIIRDQQAN--TDQQINKP----TADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRSTIPIGRSRRSS

XP_027035273.1 neurofilament heavy polypeptide-like isoform X6 [Tachysurus fulvidraco]3.0e-0531.35Show/hide
Query:  SHQRNYSHQSDWSRQVVKSLQVKLMTTMVTTPAGNYSHQSDWSRQVVKSLQVKLMTIVVTTPAGNYSHQSDWSRQSRDRVQS-ILQDPSRRIQSPENQDE
        S Q N   +S  S+Q VKS   + M + V +P    S Q +   +   S QVK      T+   N   +S  S+Q   +V+S   Q  + +++SP +Q  
Subjt:  SHQRNYSHQSDWSRQVVKSLQVKLMTTMVTTPAGNYSHQSDWSRQVVKSLQVKLMTIVVTTPAGNYSHQSDWSRQSRDRVQS-ILQDPSRRIQSPENQDE

Query:  IKIKPIQRSQANSRSKRSTSQ----PT-DQEDQQVSRPIIQEINKPTDPKITSTADQEINKSQPIIQEDQQANKPIQQITSQQAD-----PRDQQVNRPI
         ++K     Q NS+ K  TSQ    PT  QE+ QV  P  Q++  PT  ++ S   Q++N SQ      QQ N  ++  TSQQ +     P  QQV RP 
Subjt:  IKIKPIQRSQANSRSKRSTSQ----PT-DQEDQQVSRPIIQEINKPTDPKITSTADQEINKSQPIIQEDQQANKPIQQITSQQAD-----PRDQQVNRPI

Query:  IRDQQANTDQQINKPTADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRS
         +  ++ T QQ+  PT+   + Q+ +  P  QQ N  ++   SQQ +   +S
Subjt:  IRDQQANTDQQINKPTADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRS

XP_027035285.1 serine/arginine repetitive matrix protein 5-like isoform X17 [Tachysurus fulvidraco]2.0e-0429.97Show/hide
Query:  DDHGGEITASEKLMTTVVTTPAGN------YSHQRNYSHQSDWSRQVVK--SLQVKLMTTMVTTPAGNYSHQSDWSRQVVKSLQVKLMTIVVTTPAG---
        ++   + ++SEKL     T+   N       S Q N   +S  S+QV    S QV       T+   N   +S  S+Q VKS   + M   V +P     
Subjt:  DDHGGEITASEKLMTTVVTTPAGN------YSHQRNYSHQSDWSRQVVK--SLQVKLMTTMVTTPAGNYSHQSDWSRQVVKSLQVKLMTIVVTTPAG---

Query:  NYSHQSDWSRQSRDRVQS-ILQDPSRRIQSPENQD-EIKIKPIQRSQANSRSKRSTSQ----PTDQE-DQQVSRPIIQEINKPTDPKITSTADQEINKSQ
        N   +S  S+Q +  V+S   Q  + +++SP +Q    ++K     Q NS+ K  TSQ    PT Q+ + QV  P  Q++  PT  ++ S   Q++N SQ
Subjt:  NYSHQSDWSRQSRDRVQS-ILQDPSRRIQSPENQD-EIKIKPIQRSQANSRSKRSTSQ----PTDQE-DQQVSRPIIQEINKPTDPKITSTADQEINKSQ

Query:  PIIQEDQQANKPIQQITSQQAD-PRDQQVNRPIIRDQQANTDQQINKPTADPRDQQVTTD--HPEDQQANKPIQEIISQQADHPRRS
              QQ N  ++  TSQQ   P  QQV  P  +  ++ T QQ+N     P  QQ+ +    P  QQ N  ++   SQQ +   +S
Subjt:  PIIQEDQQANKPIQQITSQQAD-PRDQQVNRPIIRDQQANTDQQINKPTADPRDQQVTTD--HPEDQQANKPIQEIISQQADHPRRS

XP_027035309.1 serine/arginine repetitive matrix protein 5-like isoform X40 [Tachysurus fulvidraco]3.3e-0428.67Show/hide
Query:  DDHGGEITASEKLMTTVVTTPAGN------YSHQRNYSHQSDWSRQVVK--SLQVKLMTTMVTTPAGNYSHQSDWSRQVVKSLQVKLMTIVVTTPAGNYS
        ++   + ++SEKL     T+   N       S Q N   +S  S+QV    S QV       T+   N   +S  S+Q VKS   + M   V +P  +  
Subjt:  DDHGGEITASEKLMTTVVTTPAGN------YSHQRNYSHQSDWSRQVVK--SLQVKLMTTMVTTPAGNYSHQSDWSRQVVKSLQVKLMTIVVTTPAGNYS

Query:  HQSDWSRQSRDRVQS-ILQDPSRRIQSPENQDEIKIKPIQRSQANSRSKRSTSQPTDQEDQQVSRPIIQEINKPTDPKITSTADQEIN---KSQPIIQED
         +S  S+Q   +V+S   Q  + +++SP +Q   ++K     Q NS+ K  TS       QQV RP  Q++  PT  ++ S   Q++N   KS    Q +
Subjt:  HQSDWSRQSRDRVQS-ILQDPSRRIQSPENQDEIKIKPIQRSQANSRSKRSTSQPTDQEDQQVSRPIIQEINKPTDPKITSTADQEIN---KSQPIIQED

Query:  QQANKP-IQQITSQQADPRDQQVNRPIIRDQQANTDQQINKPTADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRS
         Q   P  QQ+ SQ   P  QQ+N  +        + Q+  PT+   D QV +  P  QQ N  ++ + S Q +   +S
Subjt:  QQANKP-IQQITSQQADPRDQQVNRPIIRDQQANTDQQINKPTADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRS

TrEMBL top hitse value%identityAlignment
A0A0E3VL56 Putative papain-like cysteine prorease7.3e-0535.38Show/hide
Query:  RSTSQPTDQ-----EDQQVSRPIIQEINKPTDPKITSTADQEINKSQPIIQE-DQQANKPIQQITSQQAD-PRDQQVNRPIIRDQQANTDQQINKPTADP
        +ST +P DQ      DQ    P+ Q  ++P D  +T + DQ     +P+ Q  DQ A +P+ Q T Q AD P DQ  ++P+ +     T+Q  ++PT  P
Subjt:  RSTSQPTDQ-----EDQQVSRPIIQEINKPTDPKITSTADQEINKSQPIIQE-DQQANKPIQQITSQQAD-PRDQQVNRPIIRDQQANTDQQINKPTADP

Query:  RDQQVTTDHPEDQQANKPIQEIISQQADHP
         DQ  TTD P +Q   +P  E ++Q  D P
Subjt:  RDQQVTTDHPEDQQANKPIQEIISQQADHP

A0A0M8ZNX4 Single-stranded DNA-binding protein, mitochondrial (Fragment)6.2e-0430.96Show/hide
Query:  PAGNYSHQSDWSRQSRDRVQSILQDPSRRIQSPENQDEIKIKPIQRS-----QANSRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTDPKITSTADQ
        PA   + +    + SR   Q   +   ++   P +Q   +    Q S     Q +  + + TS+P DQ+     DQQ SRP  Q+ ++P D + +  ADQ
Subjt:  PAGNYSHQSDWSRQSRDRVQSILQDPSRRIQSPENQDEIKIKPIQRS-----QANSRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTDPKITSTADQ

Query:  EINK---SQPIIQEDQQANKPIQQITSQQAD-----PRDQQVNRPIIRDQQANTDQQINKP----TADPRDQQVTTDHPEDQQANKPIQEIISQQAD
        + ++    Q     DQQ ++P  Q TS+ AD     P DQQ +RP  +      DQQ ++P    T+ P DQQ  T  P DQQ ++P  +  S+ AD
Subjt:  EINK---SQPIIQEDQQANKPIQQITSQQAD-----PRDQQVNRPIIRDQQANTDQQINKP----TADPRDQQVTTDHPEDQQANKPIQEIISQQAD

A0A433UEB9 Uncharacterized protein3.0e-0636.76Show/hide
Query:  PSRRIQSPENQDEIKIKPIQRSQANSRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTDPKITSTADQEINK---SQPIIQEDQQANKPIQQITSQQA
        P+  I+ P N   +        + N  + + T++PTDQ+      QQ +RP  Q+ N+P D +    ADQ+ N+    Q     DQQAN+P  Q T++  
Subjt:  PSRRIQSPENQDEIKIKPIQRSQANSRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTDPKITSTADQEINK---SQPIIQEDQQANKPIQQITSQQA

Query:  D-----PRDQQVNRPIIRDQQAN--TDQQINKP----TADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRSTIPIGRSRRSS
        D     P DQQ +RP   DQQ N  TDQQ N+P    T  P DQQ  T+ P DQQ N+P   ++   +D   R T  + RSRR S
Subjt:  D-----PRDQQVNRPIIRDQQAN--TDQQINKP----TADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRSTIPIGRSRRSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCATGGTGGTGA
AATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGA
AATCACTGCAAGTGAAGCTGATGACGACCATGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTG
ATGACGATCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGAGCAGAGACAGAGTCCAGAGCATTCTCCAAGATCCAAGTCGCAGAAT
CCAGAGTCCAGAGAATCAAGATGAGATCAAAATCAAGCCGATCCAAAGATCTCAAGCCAACAGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAAC
AAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGATCCAAAGATCACAAGCACAGCCGATCAAGAGATCAACAAGTCACAGCCGATCATCCAAGAGGATCAA
CAAGCTAACAAGCCGATCCAACAGATCACAAGCCAACAGGCCGATCCAAGAGATCAACAAGTCAACAGACCGATCATCAGAGATCAACAAGCTAACACCGATCAACAAAT
CAACAAGCCAACAGCCGATCCAAGAGATCAACAAGTCACAACCGATCATCCAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAGCCAACAGGCCGATCATC
CAAGAAGATCAACAATCCCAATAGGTCGATCCAGGAGATCATCAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCATGGTGGTGA
AATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGA
AATCACTGCAAGTGAAGCTGATGACGACCATGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTG
ATGACGATCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGAGCAGAGACAGAGTCCAGAGCATTCTCCAAGATCCAAGTCGCAGAAT
CCAGAGTCCAGAGAATCAAGATGAGATCAAAATCAAGCCGATCCAAAGATCTCAAGCCAACAGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAAC
AAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGATCCAAAGATCACAAGCACAGCCGATCAAGAGATCAACAAGTCACAGCCGATCATCCAAGAGGATCAA
CAAGCTAACAAGCCGATCCAACAGATCACAAGCCAACAGGCCGATCCAAGAGATCAACAAGTCAACAGACCGATCATCAGAGATCAACAAGCTAACACCGATCAACAAAT
CAACAAGCCAACAGCCGATCCAAGAGATCAACAAGTCACAACCGATCATCCAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAGCCAACAGGCCGATCATC
CAAGAAGATCAACAATCCCAATAGGTCGATCCAGGAGATCATCAACCTAA
Protein sequenceShow/hide protein sequence
MTTVVTTPAGNYSHQSDWSRQVVKSLQVKADDDHGGEITASEKLMTTVVTTPAGNYSHQRNYSHQSDWSRQVVKSLQVKLMTTMVTTPAGNYSHQSDWSRQVVKSLQVKL
MTIVVTTPAGNYSHQSDWSRQSRDRVQSILQDPSRRIQSPENQDEIKIKPIQRSQANSRSKRSTSQPTDQEDQQVSRPIIQEINKPTDPKITSTADQEINKSQPIIQEDQ
QANKPIQQITSQQADPRDQQVNRPIIRDQQANTDQQINKPTADPRDQQVTTDHPEDQQANKPIQEIISQQADHPRRSTIPIGRSRRSST