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Lag0014850 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014850
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTetratricopeptide repeat-like superfamily protein
Genome locationchr12:5210648..5214034
RNA-Seq ExpressionLag0014850
SyntenyLag0014850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584024.1 hypothetical protein SDJN03_19956, partial [Cucurbita argyrosperma subsp. sororia]4.0e-0678.05Show/hide
Query:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR
        A +KS+TFKDRTN ALT VNVSAQA+KLRKE S++QDDLNR
Subjt:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR

KAG6584028.1 hypothetical protein SDJN03_19960, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0847.47Show/hide
Query:  GVGSGIELEGETTRDAREHVEGDNGRQSNVVEHAHEEVRDLGESRPSDWCLRGRV--VAGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR
        G   G+  + +      +HVEGDNGRQ  +    H +  +  E+        G V   A +KS+TFKDRTN ALT VNVSAQA+KLRKE S++QDDLNR
Subjt:  GVGSGIELEGETTRDAREHVEGDNGRQSNVVEHAHEEVRDLGESRPSDWCLRGRV--VAGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR

KAG7019641.1 hypothetical protein SDJN02_18604 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-0678.05Show/hide
Query:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR
        A +KS+TFKDRTN ALT VNVSAQA+KLRKE S++QDDLNR
Subjt:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR

XP_022927000.1 uncharacterized protein LOC111433962 isoform X1 [Cucurbita moschata]6.9e-0678.05Show/hide
Query:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR
        A +KS+TFKDRTN ALT VNVSAQA+KLRKE S++QDDLNR
Subjt:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR

XP_022927001.1 uncharacterized protein LOC111433962 isoform X2 [Cucurbita moschata]6.9e-0678.05Show/hide
Query:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR
        A +KS+TFKDRTN ALT VNVSAQA+KLRKE S++QDDLNR
Subjt:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR

TrEMBL top hitse value%identityAlignment
A0A6A2Y8W4 Tetratricopeptide repeat-like superfamily protein5.7e-0647.96Show/hide
Query:  EGETTRDAREHVEGDNGRQSNVVEHAHEEVRDLGESRPSD-----WCLRGRVVAGEKSKTFKDRTNLALTLVNVS----AQAVKLRKEASLSQDDLNR
        E +T RDA EHVE DNGR+SN +   H +  D  ES   D     W       A +K++TF+DRTN       VS    A AVKLRKE SLSQD+LNR
Subjt:  EGETTRDAREHVEGDNGRQSNVVEHAHEEVRDLGESRPSD-----WCLRGRVVAGEKSKTFKDRTNLALTLVNVS----AQAVKLRKEASLSQDDLNR

A0A6J1EGH0 uncharacterized protein LOC111433962 isoform X23.3e-0678.05Show/hide
Query:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR
        A +KS+TFKDRTN ALT VNVSAQA+KLRKE S++QDDLNR
Subjt:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR

A0A6J1EMM8 uncharacterized protein LOC111433962 isoform X13.3e-0678.05Show/hide
Query:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR
        A +KS+TFKDRTN ALT VNVSAQA+KLRKE S++QDDLNR
Subjt:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR

A0A6J1KEP4 uncharacterized protein LOC1114951494.8e-0573.17Show/hide
Query:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR
        A +KS+TFKDRTN ALT VNVS  A+KLRKE S++QDDLNR
Subjt:  AGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGGCCGAGCACATGGTCGGCCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCCCCACTGCCTCTGGATGCCCCGGTTTCGCCCGGTTTGA
CCTAAAACGCCTCCGAAACCCTAAAAAGGCTAGGAGGATGTACAGCATCGGAGCCAGTGTGGCGAGCACCACACCGGTGCGCAGGTTTACTGTCTTGCAGGCCACGTCTT
CTCCTTCATCTACAAATTTACCGTTGATGGCACGTGGAGGTCAGGCTCCTCTCCCAGAAATTGACGTCGATGGAAGCTCTGCCACGAGGATCGTTAGGCGGAAAGGCGTT
GGGAGTGGTATCGAACTCGAAGGCGAAACGACACGAGACGCTAGAGAACACGTGGAAGGCGATAACGGAAGGCAGAGCAATGTCGTTGAGCATGCACATGAAGAAGTGCG
AGACTTGGGAGAATCACGACCGTCAGATTGGTGCCTGCGAGGTCGAGTCGTCGCCGGTGAAAAATCGAAGACGTTCAAGGACAGGACGAATCTGGCATTGACGCTGGTGA
ATGTGTCGGCTCAGGCAGTGAAGCTGAGGAAAGAGGCGTCGCTGAGCCAGGACGATTTGAACCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGGCCGAGCACATGGTCGGCCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCCCCACTGCCTCTGGATGCCCCGGTTTCGCCCGGTTTGA
CCTAAAACGCCTCCGAAACCCTAAAAAGGCTAGGAGGATGTACAGCATCGGAGCCAGTGTGGCGAGCACCACACCGGTGCGCAGGTTTACTGTCTTGCAGGCCACGTCTT
CTCCTTCATCTACAAATTTACCGTTGATGGCACGTGGAGGTCAGGCTCCTCTCCCAGAAATTGACGTCGATGGAAGCTCTGCCACGAGGATCGTTAGGCGGAAAGGCGTT
GGGAGTGGTATCGAACTCGAAGGCGAAACGACACGAGACGCTAGAGAACACGTGGAAGGCGATAACGGAAGGCAGAGCAATGTCGTTGAGCATGCACATGAAGAAGTGCG
AGACTTGGGAGAATCACGACCGTCAGATTGGTGCCTGCGAGGTCGAGTCGTCGCCGGTGAAAAATCGAAGACGTTCAAGGACAGGACGAATCTGGCATTGACGCTGGTGA
ATGTGTCGGCTCAGGCAGTGAAGCTGAGGAAAGAGGCGTCGCTGAGCCAGGACGATTTGAACCGGTGA
Protein sequenceShow/hide protein sequence
MAEAEHMVGLGPLARAEPVRSRLVPTASGCPGFARFDLKRLRNPKKARRMYSIGASVASTTPVRRFTVLQATSSPSSTNLPLMARGGQAPLPEIDVDGSSATRIVRRKGV
GSGIELEGETTRDAREHVEGDNGRQSNVVEHAHEEVRDLGESRPSDWCLRGRVVAGEKSKTFKDRTNLALTLVNVSAQAVKLRKEASLSQDDLNR