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Lag0014874 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014874
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionglycine-rich protein-like
Genome locationchr12:5437845..5439895
RNA-Seq ExpressionLag0014874
SyntenyLag0014874
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589124.1 hypothetical protein SDJN03_17689, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1761.46Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        M+SKAF++LGLLF +V+LLS EE  ATAR LKSV+EA+MET NGDG+ED KRRFGGGHHGHRH    HH    H   GCS       E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

XP_022930749.1 glycine-rich protein DC7.1-like [Cucurbita moschata]8.2e-1863.54Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        M+SKAF++LGLLFTIV+LLS EE  ATAR LKSV+EA+MET NGDG+ED KRRFGGGHHGHRH    HH    H   GCS       E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

XP_022989495.1 glycine-rich protein DC7.1-like [Cucurbita maxima]1.4e-1761.46Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        M+SKAF++LGLLF +V+LLS EE  ATAR LKSV+EA+MET NGDG+ED KRRFGGGHHGH+H    HH  C H   GCS       E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

XP_023529828.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]1.2e-1660.42Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        M+SKAF++LGLLF +V+LLS EE  ATAR LKSV+E +MET NGDG+ED KRRFGGGHHGHRH    HH    H   GCS       E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

XP_038888674.1 glycine-rich protein-like [Benincasa hispida]7.9e-2978.95Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHH-GGCSRCCSFAGEAVDAEP
        MSSKAF+ LG LF +VVLLS EEV A A DLKSV++AMMETN G G EDVKRRF  GHHGH   RHCHHGCCGHHH GGCSRCCSFAGEAVDAEP
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHH-GGCSRCCSFAGEAVDAEP

TrEMBL top hitse value%identityAlignment
A0A0A0K5A1 Uncharacterized protein3.2e-0750Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHR--RHCHHGCCGHHHGGCSRCCSFAGEA--VD----A
        MSSK+F++LGLLF  VVL S E +  TARD K + EA MET   D VE  +  +GG H  +       C+ GCC    G C RCCSFAGEA  VD    A
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHR--RHCHHGCCGHHHGGCSRCCSFAGEA--VD----A

Query:  EPNN
        +PNN
Subjt:  EPNN

A0A6J1C3E0 glycine-rich protein DC7.1-like4.1e-1560.19Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFA--GEAVDAE-----
        MSSK  + LGLLF +VVLLS EEV ATARDLKSV+E M ETNN  G+ED KR   G HH HR RRHCH     HHH      CSFA   EAVD E     
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFA--GEAVDAE-----

Query:  PNN
        PNN
Subjt:  PNN

A0A6J1C3T3 glycine-rich protein 3 short isoform-like3.5e-1449.61Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVK-------------------RRFGGGHHGH----------RHR----RHC
        M+SKAF++LGLLF +VVLLS +    TARDLK   E +MET   DGVED K                    R+GGG+ GH          R R    RHC
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVK-------------------RRFGGGHHGH----------RHR----RHC

Query:  HHGCCGHHHGGCSRCCSFAGEAVDAEP
        HHGCCG +HG C RCCS+AGEAVD EP
Subjt:  HHGCCGHHHGGCSRCCSFAGEAVDAEP

A0A6J1ESD5 glycine-rich protein DC7.1-like4.0e-1863.54Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        M+SKAF++LGLLFTIV+LLS EE  ATAR LKSV+EA+MET NGDG+ED KRRFGGGHHGHRH    HH    H   GCS       E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

A0A6J1JMI7 glycine-rich protein DC7.1-like6.8e-1861.46Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        M+SKAF++LGLLF +V+LLS EE  ATAR LKSV+EA+MET NGDG+ED KRRFGGGHHGH+H    HH  C H   GCS       E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein1.5e-0639.45Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPE----EVMATARDLKSVDEAMMETNNGDGVEDV--KRRFGGGH---HGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVD
        M SKAFL LGL      L+S E    E+  T+  +K   E  ++ +   G  DV     +GGG     G   RR C +GCC   + GC RCCS+AGEA+D
Subjt:  MSSKAFLVLGLLFTIVVLLSPE----EVMATARDLKSVDEAMMETNNGDGVEDV--KRRFGGGH---HGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVD

Query:  ----AEPNN
            A+P+N
Subjt:  ----AEPNN

Q9SL15 Glycine-rich protein 35.4e-0451.11Show/hide
Query:  RRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        R+ GGG  G     +C HGCC   + GCSRCCS+AGEAV  +P +
Subjt:  RRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

Arabidopsis top hitse value%identityAlignment
AT2G05520.1 glycine-rich protein 33.8e-0551.11Show/hide
Query:  RRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        R+ GGG  G     +C HGCC   + GCSRCCS+AGEAV  +P +
Subjt:  RRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

AT2G05520.2 glycine-rich protein 33.8e-0551.11Show/hide
Query:  RRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        R+ GGG  G     +C HGCC   + GCSRCCS+AGEAV  +P +
Subjt:  RRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

AT2G05520.3 glycine-rich protein 33.8e-0551.11Show/hide
Query:  RRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN
        R+ GGG  G     +C HGCC   + GCSRCCS+AGEAV  +P +
Subjt:  RRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN

AT2G05520.5 glycine-rich protein 32.2e-0532.14Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHH---GHRHR-------------RHCHHGCCGHHHGGCSRCCS
        M+SKA ++LG LF +++++S     ++A       E +     G G        GGG +   G R++              +C HGCC   + GCSRCCS
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHH---GHRHR-------------RHCHHGCCGHHHGGCSRCCS

Query:  FAGEAVDAEPNN
        +AGEAV  +P +
Subjt:  FAGEAVDAEPNN

AT2G05530.1 Glycine-rich protein family2.2e-0534.45Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMET-------------NNGDGVEDVKRRFGGGH----------HGHRHRRHCHHGCCGHHHG
        M+SKA ++ GL     VLL   EV A +  +KS     ++              N G G        GGG+          HG RH  +C +GCC   + 
Subjt:  MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMET-------------NNGDGVEDVKRRFGGGH----------HGHRHRRHCHHGCCGHHHG

Query:  GCSRCCSFAGEAVDAEPNN
        GCSRCCS+AGEAV  +P +
Subjt:  GCSRCCSFAGEAVDAEPNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAAGCTTTCCTCGTCCTCGGTCTCCTTTTCACTATCGTCGTCCTCCTCTCCCCGGAGGAGGTTATGGCTACTGCGAGAGACTTGAAAAGCGTCGACGAAGC
CATGATGGAGACCAATAATGGAGATGGAGTTGAGGACGTGAAGCGTCGTTTCGGTGGAGGCCACCACGGGCACAGGCACCGTCGCCATTGCCACCACGGTTGTTGTGGTC
ACCACCACGGCGGTTGCAGTAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGCAGAGCCTAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAAGCTTTCCTCGTCCTCGGTCTCCTTTTCACTATCGTCGTCCTCCTCTCCCCGGAGGAGGTTATGGCTACTGCGAGAGACTTGAAAAGCGTCGACGAAGC
CATGATGGAGACCAATAATGGAGATGGAGTTGAGGACGTGAAGCGTCGTTTCGGTGGAGGCCACCACGGGCACAGGCACCGTCGCCATTGCCACCACGGTTGTTGTGGTC
ACCACCACGGCGGTTGCAGTAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGCAGAGCCTAACAACTGA
Protein sequenceShow/hide protein sequence
MSSKAFLVLGLLFTIVVLLSPEEVMATARDLKSVDEAMMETNNGDGVEDVKRRFGGGHHGHRHRRHCHHGCCGHHHGGCSRCCSFAGEAVDAEPNN