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Lag0014875 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014875
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlycine rich protein
Genome locationchr12:5447478..5448111
RNA-Seq ExpressionLag0014875
SyntenyLag0014875
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CEG62450.1 Glycine rich protein [Cucumis sativus]2.3e-1146.56Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-
        MSSKAF FLGL  A V+L+S E      ARDLA T  K +NE T++TNGVEDAKYGR  +  G+G        GG   Y        G Y G     GR 
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-

Query:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP
        CRYG CG+        +CC+  GEVV+ AKP
Subjt:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP

KGN43456.1 hypothetical protein Csa_020456 [Cucumis sativus]8.0e-1247.33Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-
        MSSKAF FLGLL A V+L+S E      ARDLA T  K +NE T++TNGVEDAKYGR  +  G+G        GG   Y        G Y G     GR 
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-

Query:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP
        CRYG CG+        +CC+  GEVV+ AKP
Subjt:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP

NP_001267708.1 glycine-rich protein-like precursor [Cucumis sativus]8.0e-1247.33Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-
        MSSKAF FLGLL A V+L+S E      ARDLA T  K +NE T++TNGVEDAKYGR  +  G+G        GG   Y        G Y G     GR 
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-

Query:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP
        CRYG CG+        +CC+  GEVV+ AKP
Subjt:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP

XP_021890154.1 glycine-rich protein-like [Carica papaya]1.4e-1145.45Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLA--PTPKNNNEVTMKTNGVEDAKYGREYFFPGFGNDGGSSDYDGDYSGP----EARIGRCRYGCCGNN
        M+SK F  LGL  A+++LIS E      ARDLA   T + + EV  +TNGVE+AKY      PG+G   G   Y+G Y+G       R G CRYGCC   
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLA--PTPKNNNEVTMKTNGVEDAKYGREYFFPGFGNDGGSSDYDGDYSGP----EARIGRCRYGCCGNN

Query:  -DDRGRCTRCCNPFGEVVDAK
           RG C RCC+  GE VDA+
Subjt:  -DDRGRCTRCCNPFGEVVDAK

XP_022952571.1 glycine-rich protein-like isoform X2 [Cucurbita moschata]1.4e-1151.67Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKY-GREYFFPGFGNDGGSSDYD--GDYSGPEARIGRCRYGCCGNNDD
        MSSKAF FLGLLFA+V+LIS E      ARDLA T  K  NE T +TNGVEDAKY G +  + G G  GG   Y   G Y G       CRYG CG    
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKY-GREYFFPGFGNDGGSSDYD--GDYSGPEARIGRCRYGCCGNNDD

Query:  RGRCTRCCNPFGEVVD-AKP
             RCC+  GEVV+ AKP
Subjt:  RGRCTRCCNPFGEVVD-AKP

TrEMBL top hitse value%identityAlignment
A0A0A0K6L7 Uncharacterized protein3.9e-1247.33Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-
        MSSKAF FLGLL A V+L+S E      ARDLA T  K +NE T++TNGVEDAKYGR  +  G+G        GG   Y        G Y G     GR 
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-

Query:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP
        CRYG CG+        +CC+  GEVV+ AKP
Subjt:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP

A0A0A1IXP4 Glycine rich protein1.1e-1146.56Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-
        MSSKAF FLGL  A V+L+S E      ARDLA T  K +NE T++TNGVEDAKYGR  +  G+G        GG   Y        G Y G     GR 
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-

Query:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP
        CRYG CG+        +CC+  GEVV+ AKP
Subjt:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP

A0A5D3DE59 Cold and drought-regulated protein CORA-like1.5e-1149.23Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYG----REYFFPGFGNDG------GSSDYD--GDYSGPEARIGR-C
        MSSKAF FLGLL A V+L+S E      ARDLA T  K +NE T++TNGVEDAKYG    R Y   G+G  G      G   Y   G Y G     GR C
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYG----REYFFPGFGNDG------GSSDYD--GDYSGPEARIGR-C

Query:  RYGCCGNNDDRGRCTRCCNPFGEVVD-AKP
        RYG CG         RCC+  GEVV+ AKP
Subjt:  RYGCCGNNDDRGRCTRCCNPFGEVVD-AKP

A0A6J1GKL6 glycine-rich protein-like isoform X26.6e-1251.67Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKY-GREYFFPGFGNDGGSSDYD--GDYSGPEARIGRCRYGCCGNNDD
        MSSKAF FLGLLFA+V+LIS E      ARDLA T  K  NE T +TNGVEDAKY G +  + G G  GG   Y   G Y G       CRYG CG    
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKY-GREYFFPGFGNDGGSSDYD--GDYSGPEARIGRCRYGCCGNNDD

Query:  RGRCTRCCNPFGEVVD-AKP
             RCC+  GEVV+ AKP
Subjt:  RGRCTRCCNPFGEVVD-AKP

A0P8W6 Cell wall glycine-rich protein3.9e-1247.33Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-
        MSSKAF FLGLL A V+L+S E      ARDLA T  K +NE T++TNGVEDAKYGR  +  G+G        GG   Y        G Y G     GR 
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPT-PKNNNEVTMKTNGVEDAKYGREYFFPGFGN------DGGSSDYD-------GDYSGPEARIGR-

Query:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP
        CRYG CG+        +CC+  GEVV+ AKP
Subjt:  CRYGCCGNNDDRGRCTRCCNPFGEVVD-AKP

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein4.9e-0437.29Show/hide
Query:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPTPKNNNEVTMKTNGVEDAKYGREYFFPGFGNDGGSSDYDGDYSGPEARIG------RCRYGCCGNN
        M SKAF FLGL  A   LIS E VA  +A    P   +        NGV+    G      G+ + GG    DG Y G   R G       CRYGCC   
Subjt:  MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPTPKNNNEVTMKTNGVEDAKYGREYFFPGFGNDGGSSDYDGDYSGPEARIG------RCRYGCCGNN

Query:  DDRGRCTRCCNPFGEVVD
             C RCC+  GE +D
Subjt:  DDRGRCTRCCNPFGEVVD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTAAAGCTTTTGCTTTCCTCGGCCTTCTCTTTGCCATGGTCGTTCTCATCTCACCGGAAGCGGTGGCGGTGGCAGTGGCGAGAGACCTCGCTCCGACTCCCAA
GAATAACAACGAGGTCACAATGAAGACGAATGGGGTAGAGGATGCCAAGTATGGCAGGGAGTACTTTTTCCCCGGATTTGGAAATGATGGTGGCTCCTCTGACTACGACG
GTGACTACAGTGGACCCGAAGCTCGTATAGGTCGTTGCAGGTACGGTTGCTGTGGTAACAACGACGATCGCGGCCGGTGCACCCGGTGCTGCAACCCTTTCGGAGAAGTT
GTAGATGCAAAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTAAAGCTTTTGCTTTCCTCGGCCTTCTCTTTGCCATGGTCGTTCTCATCTCACCGGAAGCGGTGGCGGTGGCAGTGGCGAGAGACCTCGCTCCGACTCCCAA
GAATAACAACGAGGTCACAATGAAGACGAATGGGGTAGAGGATGCCAAGTATGGCAGGGAGTACTTTTTCCCCGGATTTGGAAATGATGGTGGCTCCTCTGACTACGACG
GTGACTACAGTGGACCCGAAGCTCGTATAGGTCGTTGCAGGTACGGTTGCTGTGGTAACAACGACGATCGCGGCCGGTGCACCCGGTGCTGCAACCCTTTCGGAGAAGTT
GTAGATGCAAAACCCTAA
Protein sequenceShow/hide protein sequence
MSSKAFAFLGLLFAMVVLISPEAVAVAVARDLAPTPKNNNEVTMKTNGVEDAKYGREYFFPGFGNDGGSSDYDGDYSGPEARIGRCRYGCCGNNDDRGRCTRCCNPFGEV
VDAKP