; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014891 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014891
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationchr12:5605235..5607276
RNA-Seq ExpressionLag0014891
SyntenyLag0014891
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144523.1 uncharacterized protein At4g28440 [Cucumis sativus]1.1e-6995.17Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFE KEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_008455497.1 PREDICTED: uncharacterized protein At4g28440 [Cucumis melo]2.1e-7096.55Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_022136009.1 uncharacterized protein At4g28440-like [Momordica charantia]4.3e-7198.62Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATAAVNAPAKRKPVFIKVEELKPGTSGHTL VKVVSSKNVK+VNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_022988994.1 uncharacterized protein At4g28440-like [Cucurbita maxima]4.1e-6995.86Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT AVNAPAKRKPVFIKVE+LKPG+SGHTLTVKVVSSKNVKVVNKGGRSAM TARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRIEVAEPA+FEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_038887250.1 uncharacterized protein At4g28440-like [Benincasa hispida]7.4e-7197.24Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT AVNAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

TrEMBL top hitse value%identityAlignment
A0A0A0K1C6 Uncharacterized protein5.2e-7095.17Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFE KEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A1S3C119 uncharacterized protein At4g284401.0e-7096.55Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A5A7UWS4 Uncharacterized protein1.0e-7096.55Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A6J1C327 uncharacterized protein At4g28440-like2.1e-7198.62Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATAAVNAPAKRKPVFIKVEELKPGTSGHTL VKVVSSKNVK+VNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A6J1JN47 uncharacterized protein At4g28440-like2.0e-6995.86Show/hide
Query:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT AVNAPAKRKPVFIKVE+LKPG+SGHTLTVKVVSSKNVKVVNKGGRSAM TARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRIEVAEPA+FEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284402.0e-4766.9Show/hide
Query:  ATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID
        A A   +  KRKPVF+KVE+LKPGT+GHTLTVKV+ +  V  V +  R A   +RP Q +RI ECL+GDETG I+FTARNDQVD+MKPG TV LRN++ID
Subjt:  ATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID

Query:  MFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNV
        MFKG+MRL VDKWGRIE    A+F VKEDNNLSLVEYEL+NV
Subjt:  MFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNV

Q97W73 Single-stranded DNA binding protein Ssb8.1e-0429.36Show/hide
Query:  KVEELKPGTSGHTLTVKVVSSKNVK-VVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGR
        KV  LKP      +TV+V+ +   + +  K G           +  ISE +VGDETG +  T        +K G  V + NA    FKG ++L      +
Subjt:  KVEELKPGTSGHTLTVKVVSSKNVK-VVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGR

Query:  IEVAEPANF
        I  A    F
Subjt:  IEVAEPANF

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein1.8e-4367.65Show/hide
Query:  AKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL
        A RKPVF KV EL+PGT+GH+L VKVV++K   V+ +GG   M     Q   RI+ECLVGDETG I+FTARNDQVD+MK G+ VTLRNAKIDM+KGSMRL
Subjt:  AKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL

Query:  AVDKWGRIEVA-EPANFEVKEDNNLSLVEYELVNVE
        AVD+WGR+EVA EP +  VK+DNNLSL+EYELV+VE
Subjt:  AVDKWGRIEVA-EPANFEVKEDNNLSLVEYELVNVE

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein1.8e-4367.65Show/hide
Query:  AKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL
        A RKPVF KV EL+PGT+GH+L VKVV++K   V+ +GG   M     Q   RI+ECLVGDETG I+FTARNDQVD+MK G+ VTLRNAKIDM+KGSMRL
Subjt:  AKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL

Query:  AVDKWGRIEVA-EPANFEVKEDNNLSLVEYELVNVE
        AVD+WGR+EVA EP +  VK+DNNLSL+EYELV+VE
Subjt:  AVDKWGRIEVA-EPANFEVKEDNNLSLVEYELVNVE

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein4.4e-4568.66Show/hide
Query:  RKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAV
        +KP F KV++L+PGTSGH + VK+VS+   K+V + GR+    AR     RISEC+VGDETG IVFTARNDQVD+MK G+TVTLRNAKIDM+KGSMRLAV
Subjt:  RKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAV

Query:  DKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        DKWGR+EV EPA+F+VKED N+SL+EYELVNV E
Subjt:  DKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein2.1e-4772.59Show/hide
Query:  KRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLA
        K+KPVF+KV++LKPGTSGHTLTVKVV   +V    K G ++    RP    RISECLVGDET  I+FTARNDQV++MKPG TV LRNAKIDMFKGSMRLA
Subjt:  KRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLA

Query:  VDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE
        VDKWGRIE  EPA+  VKEDNNLSLVEYELVNV E
Subjt:  VDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE

AT4G28440.1 Nucleic acid-binding, OB-fold-like protein1.4e-4866.9Show/hide
Query:  ATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID
        A A   +  KRKPVF+KVE+LKPGT+GHTLTVKV+ +  V  V +  R A   +RP Q +RI ECL+GDETG I+FTARNDQVD+MKPG TV LRN++ID
Subjt:  ATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID

Query:  MFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNV
        MFKG+MRL VDKWGRIE    A+F VKEDNNLSLVEYEL+NV
Subjt:  MFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCAGCAGTGAATGCCCCTGCAAAGAGGAAGCCTGTCTTCATTAAAGTAGAAGAGCTAAAGCCTGGTACGAGTGGCCACACTCTCACGGTCAAGGTTGTGAG
CTCCAAAAATGTCAAGGTGGTCAATAAAGGTGGACGATCCGCCATGCTTACGGCTCGCCCTCAGCAATTAACTCGTATCTCTGAATGTCTTGTTGGTGATGAGACTGGTT
CCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTGCGGAATGCAAAGATTGACATGTTTAAAGGTTCTATGAGGTTAGCA
GTAGATAAATGGGGACGAATTGAAGTTGCTGAACCAGCTAACTTTGAAGTTAAAGAAGACAACAATCTCTCTCTGGTTGAATATGAATTAGTTAACGTCGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGGCAGCAGTGAATGCCCCTGCAAAGAGGAAGCCTGTCTTCATTAAAGTAGAAGAGCTAAAGCCTGGTACGAGTGGCCACACTCTCACGGTCAAGGTTGTGAG
CTCCAAAAATGTCAAGGTGGTCAATAAAGGTGGACGATCCGCCATGCTTACGGCTCGCCCTCAGCAATTAACTCGTATCTCTGAATGTCTTGTTGGTGATGAGACTGGTT
CCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTGCGGAATGCAAAGATTGACATGTTTAAAGGTTCTATGAGGTTAGCA
GTAGATAAATGGGGACGAATTGAAGTTGCTGAACCAGCTAACTTTGAAGTTAAAGAAGACAACAATCTCTCTCTGGTTGAATATGAATTAGTTAACGTCGAAGAGTGA
Protein sequenceShow/hide protein sequence
MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLA
VDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE