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Lag0014904 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014904
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranslation initiation factor IF-2 isoform X1
Genome locationchr12:5720731..5721786
RNA-Seq ExpressionLag0014904
SyntenyLag0014904
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645729.1 hypothetical protein Csa_020239 [Cucumis sativus]2.3e-2987.01Show/hide
Query:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        +PP V LHKPEKFVPPHLRAGFVGKEERPVNVG+RSREGNQRQYGNYGS   YGEDGRPKSGGGYERM+  GEADLG
Subjt:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

KAG7011894.1 hypothetical protein SDJN02_26801, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2886.84Show/hide
Query:  PPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        PP V LHKPEKFVPPHLRAGFVGKEERPV+VG+RSRE NQRQYGNYGSP  YGEDGRPKSGG YERM GAGEAD G
Subjt:  PPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

XP_004144518.1 uncharacterized protein LOC101206223 [Cucumis sativus]2.3e-2987.01Show/hide
Query:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        +PP V LHKPEKFVPPHLRAGFVGKEERPVNVG+RSREGNQRQYGNYGS   YGEDGRPKSGGGYERM+  GEADLG
Subjt:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

XP_008455486.1 PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo]2.0e-3088.31Show/hide
Query:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        +PP V LHKPEKFVPPHLRAGFVGKEERPVNVG+RSREGNQRQYGNYGS   YGEDGRPKSGGGYERM+G GEADLG
Subjt:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

XP_023531071.1 uncharacterized protein LOC111793433 [Cucurbita pepo subsp. pepo]5.9e-3055.42Show/hide
Query:  TPKSQKLQRSIVPWPHARPDPSYPQTHHLAAGSFPSKPLSTPIRRSSSSSGSDPFAIRFRFDLSSSSRSHWFGRDRSVSDSELGEGQGDSPPAVALHKPE
        TPK   L   + P P +RP  +    H       P +P      RS S SGSD  ++R         R+       S   S   E +   PPAVALHKPE
Subjt:  TPKSQKLQRSIVPWPHARPDPSYPQTHHLAAGSFPSKPLSTPIRRSSSSSGSDPFAIRFRFDLSSSSRSHWFGRDRSVSDSELGEGQGDSPPAVALHKPE

Query:  KFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        KFVPPHLRAGFVGKEERPVNVG+R RE NQRQYGNYGSP+ Y EDGRPKSGGGYERMRGAGEA LG
Subjt:  KFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

TrEMBL top hitse value%identityAlignment
A0A0A0K3D7 Uncharacterized protein1.1e-2987.01Show/hide
Query:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        +PP V LHKPEKFVPPHLRAGFVGKEERPVNVG+RSREGNQRQYGNYGS   YGEDGRPKSGGGYERM+  GEADLG
Subjt:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

A0A1S3C160 translation initiation factor IF-2 isoform X19.9e-3188.31Show/hide
Query:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        +PP V LHKPEKFVPPHLRAGFVGKEERPVNVG+RSREGNQRQYGNYGS   YGEDGRPKSGGGYERM+G GEADLG
Subjt:  SPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

A0A6J1GJZ3 uncharacterized protein LOC111455051 isoform X15.4e-2986.84Show/hide
Query:  PPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        PP V LHKPEKFVPPHLRAGFVGKEERPV+VG+RSRE NQRQYGNYGSP  YGEDGRPKSGG YERM GAGEAD G
Subjt:  PPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

A0A6J1GK55 uncharacterized protein LOC111455051 isoform X25.4e-2986.84Show/hide
Query:  PPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        PP V LHKPEKFVPPHLRAGFVGKEERPV+VG+RSRE NQRQYGNYGSP  YGEDGRPKSGG YERM GAGEAD G
Subjt:  PPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

A0A6J1I0F0 uncharacterized protein LOC111468300 isoform X21.6e-2886.84Show/hide
Query:  PPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG
        PP V LHKPEKFVPPHLRAGFVGKEERPVNVG+RSRE NQRQYGNYGSP  YGEDGRPKSGG  ERM GAGEAD G
Subjt:  PPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYERMRGAGEADLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54680.1 proteophosphoglycan-related9.8e-0736.84Show/hide
Query:  PLSTPIRRSSSSSGSDP----FAIRFRFDLSSSSRSHWFGRDRSVSDSELGEGQGDSPPAVALH-KPEKFVPPHLRAGFVGKEERPVNVGVRSREGN---
        P+ST  R  S+ + SDP     ++R      SSS   +  R   ++ +     + ++P  V+L  KP++FVPPHLR GFV K+E+P     R R+ N   
Subjt:  PLSTPIRRSSSSSGSDP----FAIRFRFDLSSSSRSHWFGRDRSVSDSELGEGQGDSPPAVALH-KPEKFVPPHLRAGFVGKEERPVNVGVRSREGN---

Query:  QRQYGNYGSPHP----YGEDGRPKSGGGYERMR
         ++  N   P      YG+ GRPKS GGYER+R
Subjt:  QRQYGNYGSPHP----YGEDGRPKSGGGYERMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGTCGCCTCAATCTCTGATCTTCCTCCTCAAAACGGTGTAGTCTTCAACAATCCCTCCATTGCCAAGCAATCCATTTCTCCTTCAATTATAAAATCCCCTCTTCT
TCCTTCTTTCTTCTTCCTTCTTCTTCTTCTTCTTCCTCCTCTAGATCCTCTCAAAGTTCTTCATTCCCCTGTTTCTGATCAGACTCCCAAATCCCAGAAGCTTCAAAGAT
CGATTGTCCCATGGCCGCATGCTCGTCCTGACCCGTCCTACCCCCAAACCCATCACCTCGCCGCCGGTTCTTTCCCCTCAAAACCACTCTCGACCCCCATCCGCCGATCA
TCGTCAAGTTCCGGATCAGACCCGTTCGCAATCCGATTCCGATTCGATCTCTCTTCGTCCTCTCGGTCGCACTGGTTCGGGCGTGATCGCTCCGTCTCCGATTCCGAGCT
TGGAGAAGGACAAGGAGATTCCCCTCCGGCGGTGGCGTTGCATAAACCGGAGAAATTTGTGCCTCCGCATCTCAGGGCGGGTTTCGTCGGGAAGGAGGAGCGACCTGTGA
ACGTTGGGGTCCGATCTAGAGAGGGGAATCAGAGGCAGTATGGGAATTATGGGTCTCCGCATCCGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGG
ATGAGAGGGGCGGGTGAGGCAGATCTGGGGCGATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGTCGCCTCAATCTCTGATCTTCCTCCTCAAAACGGTGTAGTCTTCAACAATCCCTCCATTGCCAAGCAATCCATTTCTCCTTCAATTATAAAATCCCCTCTTCT
TCCTTCTTTCTTCTTCCTTCTTCTTCTTCTTCTTCCTCCTCTAGATCCTCTCAAAGTTCTTCATTCCCCTGTTTCTGATCAGACTCCCAAATCCCAGAAGCTTCAAAGAT
CGATTGTCCCATGGCCGCATGCTCGTCCTGACCCGTCCTACCCCCAAACCCATCACCTCGCCGCCGGTTCTTTCCCCTCAAAACCACTCTCGACCCCCATCCGCCGATCA
TCGTCAAGTTCCGGATCAGACCCGTTCGCAATCCGATTCCGATTCGATCTCTCTTCGTCCTCTCGGTCGCACTGGTTCGGGCGTGATCGCTCCGTCTCCGATTCCGAGCT
TGGAGAAGGACAAGGAGATTCCCCTCCGGCGGTGGCGTTGCATAAACCGGAGAAATTTGTGCCTCCGCATCTCAGGGCGGGTTTCGTCGGGAAGGAGGAGCGACCTGTGA
ACGTTGGGGTCCGATCTAGAGAGGGGAATCAGAGGCAGTATGGGAATTATGGGTCTCCGCATCCGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGG
ATGAGAGGGGCGGGTGAGGCAGATCTGGGGCGATCGTGA
Protein sequenceShow/hide protein sequence
MGVASISDLPPQNGVVFNNPSIAKQSISPSIIKSPLLPSFFFLLLLLLPPLDPLKVLHSPVSDQTPKSQKLQRSIVPWPHARPDPSYPQTHHLAAGSFPSKPLSTPIRRS
SSSSGSDPFAIRFRFDLSSSSRSHWFGRDRSVSDSELGEGQGDSPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHPYGEDGRPKSGGGYER
MRGAGEADLGRS