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Lag0014910 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014910
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr12:5807803..5808171
RNA-Seq ExpressionLag0014910
SyntenyLag0014910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.4e-1751.24Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M  KKA +K + +SD+YTGP+TRSRS+GI   +D  S A+A  I K + ES K  + +K+N L+      S +     +  VM VMMADV  +  MAEME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLK
        RK+NLLMK VDERDHEIA LK
Subjt:  RKLNLLMKAVDERDHEIAYLK

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.4e-1751.24Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M  KKA +K + +SD+YTGP+TRSRS+GI   +D  S A+A  I K + ES K  + +K+N L+      S +     +  VM VMMADV  +  MAEME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLK
        RK+NLLMK VDERDHEIA LK
Subjt:  RKLNLLMKAVDERDHEIAYLK

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.4e-1751.24Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M  KKA +K + +SD+YTGP+TRSRS+GI   +D  S A+A  I K + ES K  + +K+N L+      S +     +  VM VMMADV  +  MAEME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLK
        RK+NLLMK VDERDHEIA LK
Subjt:  RKLNLLMKAVDERDHEIAYLK

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.4e-1751.24Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M  KKA +K + +SD+YTGP+TRSRS+GI   +D  S A+A  I K + ES K  + +K+N L+      S +     +  VM VMMADV  +  MAEME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLK
        RK+NLLMK VDERDHEIA LK
Subjt:  RKLNLLMKAVDERDHEIAYLK

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.4e-1751.24Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M  KKA +K + +SD+YTGP+TRSRS+GI   +D  S A+A  I K + ES K  + +K+N L+      S +     +  VM VMMADV  +  MAEME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLK
        RK+NLLMK VDERDHEIA LK
Subjt:  RKLNLLMKAVDERDHEIAYLK

TrEMBL top hitse value%identityAlignment
A0A5A7TFN2 Ty3-gypsy retrotransposon protein6.2e-1647.86Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M  KKA +  + +SD+YTGP+TRSRS+GI  ++D  S  VA RI K + ES K  + +K+N L+++    S + K   +  V  VMMAD+  +  M EME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEI
        RK+N LMKAV+ERDHEI
Subjt:  RKLNLLMKAVDERDHEI

A0A5A7ULS4 Ty3-gypsy retrotransposon protein3.3e-1746.28Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        MT KKA +  + +SD+YTGP+TR RS+GI +++D  S  VA  I K + ES K  + +K+NLL+++    S + K   + ++M VMMAD+  +  M EME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLK
        RK+N LMK V+ERDHEI  L+
Subjt:  RKLNLLMKAVDERDHEIAYLK

A0A5A7VFQ8 Ty3-gypsy retrotransposon protein8.0e-1645.08Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M  KKA +K + +SD+Y GP+TRSRS+GI  ++D  S  VA  I K + ES K  + +K+N L+++   TS + K      VM VMMAD+  +  M +ME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKN
        RK+N LMK ++ERDHEI  L++
Subjt:  RKLNLLMKAVDERDHEIAYLKN

A0A5A7VHE3 Ty3-gypsy retrotransposon protein8.0e-1645.08Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M   K  +K + +SD+YTGP+TRSRS+GI  K+D  S  +A  I K + ESSK  + +K+N L+E+    S + K   +  +MF++MAD+     MAEME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKN
        RK+NLLMK ++ER ++IA L+N
Subjt:  RKLNLLMKAVDERDHEIAYLKN

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.6e-1647.11Show/hide
Query:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME
        M  KKA +  + +S++YTGP+TRSRS+GI  ++D  S  VA  I K + ES K  + +K+N L+++   +S + K   +  VM VMMAD+  +  MAEME
Subjt:  MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLK
        RK+N LMKAV+ERDHEI  L+
Subjt:  RKLNLLMKAVDERDHEIAYLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCAAAGAAAGCTCCCGCGAAGGTTACAACATCGAGCGACTCTTATACGGGTCCTGTCACTCGTAGTCGTTCCCAAGGAATAAAGATCAAAGAGGATCACACTTC
TCCCGCTGTTGCAAGTAGGATCTCGAAATTGATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACAACCTGTTGTTCGAATCTGTCACTCCAACATCTAAGCAGC
CAAAGGATACAGTAAATCTTCATGTGATGTTCGTCATGATGGCCGACGTAGACCAAGATGAAAGGATGGCGGAGATGGAAAGAAAACTCAATCTTTTAATGAAGGCAGTT
GATGAAAGAGATCATGAGATTGCCTATTTAAAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACACCAAAGAAAGCTCCCGCGAAGGTTACAACATCGAGCGACTCTTATACGGGTCCTGTCACTCGTAGTCGTTCCCAAGGAATAAAGATCAAAGAGGATCACACTTC
TCCCGCTGTTGCAAGTAGGATCTCGAAATTGATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACAACCTGTTGTTCGAATCTGTCACTCCAACATCTAAGCAGC
CAAAGGATACAGTAAATCTTCATGTGATGTTCGTCATGATGGCCGACGTAGACCAAGATGAAAGGATGGCGGAGATGGAAAGAAAACTCAATCTTTTAATGAAGGCAGTT
GATGAAAGAGATCATGAGATTGCCTATTTAAAGAACTAG
Protein sequenceShow/hide protein sequence
MTPKKAPAKVTTSSDSYTGPVTRSRSQGIKIKEDHTSPAVASRISKLIEESSKDKVAVKDNLLFESVTPTSKQPKDTVNLHVMFVMMADVDQDERMAEMERKLNLLMKAV
DERDHEIAYLKN