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Lag0014935 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014935
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:5987053..5987619
RNA-Seq ExpressionLag0014935
SyntenyLag0014935
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU51865.1 hypothetical protein TSUD_416490 [Trifolium subterraneum]1.4e-1635.09Show/hide
Query:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK
        IKERLDR+  N     M P    THL  + SDH PIL  +   +A N   R  K  R+E+ W + +    I+ ++W+ + G    ++++KI   +  LH+
Subjt:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK

Query:  WNKTRLKGSLKSAIARKEEEIQTLYGEENEQQW-ERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNT
        W   R  G +   I   +E++Q L  +   Q   E++   E EL+D+LE EE +W+ RSR +WL+ GD+NT
Subjt:  WNKTRLKGSLKSAIARKEEEIQTLYGEENEQQW-ERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNT

KAG6683712.1 hypothetical protein I3842_12G027600 [Carya illinoinensis]1.2e-1734.86Show/hide
Query:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKAS--SGNGAQNLSYKIFRYIHKL
        IKERLDR F NH   +   + +V  L    SDH P+L    ++  +  + R  K+ R+E SW KI++ K ++ + W++S    N    +   + +   KL
Subjt:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKAS--SGNGAQNLSYKIFRYIHKL

Query:  HKWNKTRLKGSLKSAIARKEEEIQTLYGEENEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWF
          W K+ L GS K  + +K   +Q        +  E I + + E++DLLEEEE  WR RS+ +WLK GDRN+++F
Subjt:  HKWNKTRLKGSLKSAIARKEEEIQTLYGEENEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWF

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]2.9e-1943.94Show/hide
Query:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK
        I ERLDR+ +N SM      +KVTHL   SSDHRPILA W+ +    WT   ++ +RFEESWL+I   + II   W +  G G +    KI   + +L++
Subjt:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK

Query:  WNKTRLKGSLKSAIARKEEEIQTLYGEENEQQ
        WNK RL  SLK AIA KE+E++ L   + + Q
Subjt:  WNKTRLKGSLKSAIARKEEEIQTLYGEENEQQ

XP_024172304.2 uncharacterized protein LOC112178381 [Rosa chinensis]3.0e-1635.14Show/hide
Query:  QIKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGA-QNLSYKIFRYIHKL
        +IK RLDR+    S S + P  +VTHL    SDH PIL   E +S +    R K+  RFEE WL   +   ++ D W++ +GN   Q +  +I +    L
Subjt:  QIKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGA-QNLSYKIFRYIHKL

Query:  HKWNKTRLKGSLKSAIARKEEEIQTLYGEE-NEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARK
          W+  +  G LK+ I R   ++   Y +  +    E  L+ E +L DLL  E  YW+ RSR +WL  GD NT++F  +  N +K
Subjt:  HKWNKTRLKGSLKSAIARKEEEIQTLYGEE-NEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARK

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]1.2e-1734.95Show/hide
Query:  NQIKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTV-RAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHK
        N IKERLD   +N + + M P   +THL+Y+ SDHR ++   ++++  +  + R +   RFE  W K  + + II D W +SS +    ++  I R    
Subjt:  NQIKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTV-RAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHK

Query:  LHKWNKTRLKGSLKSAIARKEEEIQTLYGEENEQQWERILQA-ENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARK
        L  W++ +  GSL   I    ++I  L+  +    +   L A E +L DLL +EE YW+ RSR  WL+ GD+NTK+F QK    +K
Subjt:  LHKWNKTRLKGSLKSAIARKEEEIQTLYGEENEQQWERILQA-ENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARK

TrEMBL top hitse value%identityAlignment
A0A2Z6PLH8 Uncharacterized protein6.6e-1735.09Show/hide
Query:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK
        IKERLDR+  N     M P    THL  + SDH PIL  +   +A N   R  K  R+E+ W + +    I+ ++W+ + G    ++++KI   +  LH+
Subjt:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK

Query:  WNKTRLKGSLKSAIARKEEEIQTLYGEENEQQW-ERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNT
        W   R  G +   I   +E++Q L  +   Q   E++   E EL+D+LE EE +W+ RSR +WL+ GD+NT
Subjt:  WNKTRLKGSLKSAIARKEEEIQTLYGEENEQQW-ERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNT

A0A6J1DUG8 uncharacterized protein LOC1110241351.4e-1943.94Show/hide
Query:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK
        I ERLDR+ +N SM      +KVTHL   SSDHRPILA W+ +    WT   ++ +RFEESWL+I   + II   W +  G G +    KI   + +L++
Subjt:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK

Query:  WNKTRLKGSLKSAIARKEEEIQTLYGEENEQQ
        WNK RL  SLK AIA KE+E++ L   + + Q
Subjt:  WNKTRLKGSLKSAIARKEEEIQTLYGEENEQQ

A0A803PBM9 Uncharacterized protein3.5e-1837.77Show/hide
Query:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPIL-----AQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEW-KASSGNGAQNLSYKIFRY
        I ERLDR   N     + P+ KV HL+  SSDH P+L        E +  V W  R      FE +W   +    I+ + W K  S N A  L  K+   
Subjt:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPIL-----AQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEW-KASSGNGAQNLSYKIFRY

Query:  IHKLHKWNKTRLKGSLKSAIARKEEEIQTLYGEENEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARK
           L KWNK+R K  +K  +   EE+I  L    N + W+ +   E +   LL++EE++WR RSR +WLK GDRNTK+F +K  N RK
Subjt:  IHKLHKWNKTRLKGSLKSAIARKEEEIQTLYGEENEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARK

A0A803PUH4 Uncharacterized protein5.9e-1837.23Show/hide
Query:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPIL-----AQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEW-KASSGNGAQNLSYKIFRY
        I ERLDR   N     + P+ KV HL+  SSDH PIL        E ++   W  R      FE +W   +    I+ + W K  S N A  L  K+   
Subjt:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPIL-----AQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEW-KASSGNGAQNLSYKIFRY

Query:  IHKLHKWNKTRLKGSLKSAIARKEEEIQTLYGEENEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARK
           L KWNK+R K  +K  +   E++I  L    N + W+ +   E +   LL++EE++WR RSR +WLK GDRNTK+F +K  N RK
Subjt:  IHKLHKWNKTRLKGSLKSAIARKEEEIQTLYGEENEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARK

A0A803Q8J4 Uncharacterized protein4.6e-1835.96Show/hide
Query:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK
        ++ERLD  F+N           V+HL+Y+ SDHR +L+    QS  +  V+ +   RFE+ WLK  +  +II+  W  SSGN    L+  + + +  L  
Subjt:  IKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHK

Query:  WNKTRLKGSLKSAIARKEEEIQTLYGEEN--EQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQK
        W+K +  G+LKS I+  +  +  L          ++++ +AE  L+DLL  EE+YW+ R+R  WL+SGDRNTK+F  K
Subjt:  WNKTRLKGSLKSAIARKEEEIQTLYGEEN--EQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAATCAAGGAGCGTCTGGATAGGTATTTTATGAATCACTCCATGTCCATTATGGCCCCAAGGATTAAAGTCACTCATCTAAACTACCACAGCTCTGATCACAG
GCCTATATTAGCCCAGTGGGAGAAGCAGTCCGCTGTCAATTGGACAGTAAGGGCCAAGAAGCTGTTGAGATTTGAGGAAAGTTGGCTTAAGATTAAAGATACTAAGAGGA
TTATTGCGGATGAGTGGAAGGCGTCGAGCGGCAATGGAGCTCAGAATCTAAGTTACAAAATCTTTAGATATATTCACAAACTCCATAAGTGGAACAAAACCCGATTAAAA
GGCAGCCTGAAAAGTGCGATAGCTAGAAAAGAAGAAGAAATTCAGACATTATATGGGGAAGAAAATGAACAGCAATGGGAGAGAATCCTTCAAGCTGAGAATGAGCTGGA
GGATCTGCTAGAGGAAGAAGAAGAATACTGGCGGATTCGATCTAGAGATGTTTGGCTAAAAAGTGGGGATCGGAACACAAAATGGTTCATTCAAAAGCATCTCAACGCAA
GAAAAGGAACAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCAAATCAAGGAGCGTCTGGATAGGTATTTTATGAATCACTCCATGTCCATTATGGCCCCAAGGATTAAAGTCACTCATCTAAACTACCACAGCTCTGATCACAG
GCCTATATTAGCCCAGTGGGAGAAGCAGTCCGCTGTCAATTGGACAGTAAGGGCCAAGAAGCTGTTGAGATTTGAGGAAAGTTGGCTTAAGATTAAAGATACTAAGAGGA
TTATTGCGGATGAGTGGAAGGCGTCGAGCGGCAATGGAGCTCAGAATCTAAGTTACAAAATCTTTAGATATATTCACAAACTCCATAAGTGGAACAAAACCCGATTAAAA
GGCAGCCTGAAAAGTGCGATAGCTAGAAAAGAAGAAGAAATTCAGACATTATATGGGGAAGAAAATGAACAGCAATGGGAGAGAATCCTTCAAGCTGAGAATGAGCTGGA
GGATCTGCTAGAGGAAGAAGAAGAATACTGGCGGATTCGATCTAGAGATGTTTGGCTAAAAAGTGGGGATCGGAACACAAAATGGTTCATTCAAAAGCATCTCAACGCAA
GAAAAGGAACAGAATAG
Protein sequenceShow/hide protein sequence
MNQIKERLDRYFMNHSMSIMAPRIKVTHLNYHSSDHRPILAQWEKQSAVNWTVRAKKLLRFEESWLKIKDTKRIIADEWKASSGNGAQNLSYKIFRYIHKLHKWNKTRLK
GSLKSAIARKEEEIQTLYGEENEQQWERILQAENELEDLLEEEEEYWRIRSRDVWLKSGDRNTKWFIQKHLNARKGTE