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Lag0014937 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014937
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:5988912..5989689
RNA-Seq ExpressionLag0014937
SyntenyLag0014937
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]2.2e-1035.71Show/hide
Query:  EEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFDEPKG
        E+E   V E+ ++ I   D+D+ +  V K+ T K VN E F+ LI +IW   G+V+++  G NT++  F N++ + +V   GPW++ K++I+ ++PKG
Subjt:  EEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFDEPKG

TXG62563.1 hypothetical protein EZV62_009557 [Acer yangbiense]8.2e-1037.08Show/hide
Query:  DIDSSDKDMKKVAVC---KIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFDEPKGT
        D+   DK  +++A+C   K+ TSK VN E F+ ++ +IW   G V+++    N + C F N + ++R++  GPW +D+A+I+F+EP GT
Subjt:  DIDSSDKDMKKVAVC---KIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFDEPKGT

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]7.4e-1130.09Show/hide
Query:  MKEDKALKEFGKMKQTEEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPW
        M ++   ++  ++K T+EEKG + ++ +++I+  DK  +   VCK+ T K +  E F+ ++P+IW     V+++  G+N ++CKFK  + K +++  GP 
Subjt:  MKEDKALKEFGKMKQTEEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPW

Query:  IYDKAVILFDEPK
         +DK++++ +EP+
Subjt:  IYDKAVILFDEPK

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]9.7e-1131.82Show/hide
Query:  KMKQTEEEK--------GGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYD
        ++K T+EEK        G + ++ +++I+  DK  +   VCK+ T K +  E F+ ++P+IW A   V+++  G+N ++CKFK  + K +++  GPW +D
Subjt:  KMKQTEEEK--------GGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYD

Query:  KAVILFDEPK
        K++++ +EP+
Subjt:  KAVILFDEPK

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]4.8e-1028.37Show/hide
Query:  KMKQTEEEK--------GGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYD
        ++K T+EEK        G + ++ +++I+  DK  +   VCK+ T K +  E F+ ++P+IW A   V+++  G+N ++CKFK  + K +++  GPW +D
Subjt:  KMKQTEEEK--------GGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYD

Query:  KAVILFDEPKGT------EKSTLWNSGHVMNECEEEDSEDE
        K++++ +EP+        E  T W +        ++  E+E
Subjt:  KAVILFDEPKGT------EKSTLWNSGHVMNECEEEDSEDE

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein1.0e-1035.71Show/hide
Query:  EEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFDEPKG
        E+E   V E+ ++ I   D+D+ +  V K+ T K VN E F+ LI +IW   G+V+++  G NT++  F N++ + +V   GPW++ K++I+ ++PKG
Subjt:  EEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFDEPKG

A0A5C7IBJ4 DUF4283 domain-containing protein2.0e-0930.37Show/hide
Query:  EEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFDEPKGTEK
        +E G V ++   +I   +  +    V KI +SK VN + F  LI ++W   G+V ++    N ++ KF N++ + R+ + GPW +DK++I+  +PKG   
Subjt:  EEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFDEPKGTEK

Query:  STLWNSGHVMNECEEEDSEDE--EEEDTQYGPWLR
              GH   +CE+ +++ E  E   T++G W+R
Subjt:  STLWNSGHVMNECEEEDSEDE--EEEDTQYGPWLR

A0A6J1CQJ5 uncharacterized protein LOC1110134133.6e-1130.09Show/hide
Query:  MKEDKALKEFGKMKQTEEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPW
        M ++   ++  ++K T+EEKG + ++ +++I+  DK  +   VCK+ T K +  E F+ ++P+IW     V+++  G+N ++CKFK  + K +++  GP 
Subjt:  MKEDKALKEFGKMKQTEEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPW

Query:  IYDKAVILFDEPK
         +DK++++ +EP+
Subjt:  IYDKAVILFDEPK

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X14.7e-1131.82Show/hide
Query:  KMKQTEEEK--------GGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYD
        ++K T+EEK        G + ++ +++I+  DK  +   VCK+ T K +  E F+ ++P+IW A   V+++  G+N ++CKFK  + K +++  GPW +D
Subjt:  KMKQTEEEK--------GGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYD

Query:  KAVILFDEPK
        K++++ +EP+
Subjt:  KAVILFDEPK

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X22.3e-1028.37Show/hide
Query:  KMKQTEEEK--------GGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYD
        ++K T+EEK        G + ++ +++I+  DK  +   VCK+ T K +  E F+ ++P+IW A   V+++  G+N ++CKFK  + K +++  GPW +D
Subjt:  KMKQTEEEK--------GGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYD

Query:  KAVILFDEPKGT------EKSTLWNSGHVMNECEEEDSEDE
        K++++ +EP+        E  T W +        ++  E+E
Subjt:  KAVILFDEPKGT------EKSTLWNSGHVMNECEEEDSEDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAGACAAAGCTCTCAAGGAATTCGGCAAGATGAAACAAACTGAAGAGGAAAAAGGAGGGGTGGTCGAAGTAGAAGACAATGATATTGACAGTTCAGATAAAGA
CATGAAGAAAGTTGCAGTATGTAAGATCCATACGTCTAAAGGAGTCAATGCAGAACACTTTCAGAGACTAATCCCGAAGATTTGGGGTGCTGAAGGAAAAGTCCAAATGA
AAAAAACGGGAAGAAATACCTATGTCTGCAAGTTCAAAAACAGGAAAACAAAAAGAAGAGTAATCGAAGAAGGACCATGGATATACGACAAAGCAGTCATACTGTTCGAT
GAACCAAAGGGAACCGAGAAATCGACGCTCTGGAATTCAGGCCATGTTATGAACGAATGCGAGGAAGAAGACAGCGAAGATGAAGAGGAAGAAGATACTCAGTACGGGCC
ATGGCTTAGGGAACACTCGATGTTTAGAACAAATCCAAAGGAAAACAACCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAGACAAAGCTCTCAAGGAATTCGGCAAGATGAAACAAACTGAAGAGGAAAAAGGAGGGGTGGTCGAAGTAGAAGACAATGATATTGACAGTTCAGATAAAGA
CATGAAGAAAGTTGCAGTATGTAAGATCCATACGTCTAAAGGAGTCAATGCAGAACACTTTCAGAGACTAATCCCGAAGATTTGGGGTGCTGAAGGAAAAGTCCAAATGA
AAAAAACGGGAAGAAATACCTATGTCTGCAAGTTCAAAAACAGGAAAACAAAAAGAAGAGTAATCGAAGAAGGACCATGGATATACGACAAAGCAGTCATACTGTTCGAT
GAACCAAAGGGAACCGAGAAATCGACGCTCTGGAATTCAGGCCATGTTATGAACGAATGCGAGGAAGAAGACAGCGAAGATGAAGAGGAAGAAGATACTCAGTACGGGCC
ATGGCTTAGGGAACACTCGATGTTTAGAACAAATCCAAAGGAAAACAACCGTTAA
Protein sequenceShow/hide protein sequence
MKEDKALKEFGKMKQTEEEKGGVVEVEDNDIDSSDKDMKKVAVCKIHTSKGVNAEHFQRLIPKIWGAEGKVQMKKTGRNTYVCKFKNRKTKRRVIEEGPWIYDKAVILFD
EPKGTEKSTLWNSGHVMNECEEEDSEDEEEEDTQYGPWLREHSMFRTNPKENNR