; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014958 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014958
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:6179680..6181021
RNA-Seq ExpressionLag0014958
SyntenyLag0014958
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]4.1e-3328.98Show/hide
Query:  VDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLF
        V  L +  G WN ELIR  F  DDA  ILS+PR      D L WH++K   Y+VRSGYKVA   + +G  S++M++  WWRF+W C IP+K KIF W+ F
Subjt:  VDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLF

Query:  YDLLPSESNLRKRG---------------------WMCKWVV--------------FDVGEERNRLFMLCGSVEGRRRNK------ELFEDRVSGGKEES
           LP+ + L +R                      W C   V                V +  + +  L  SV+    N        L+ +R S     +
Subjt:  YDLLPSESNLRKRG---------------------WMCKWVV--------------FDVGEERNRLFMLCGSVEGRRRNK------ELFEDRVSGGKEES

Query:  GW------RWVADYLSHFRAFHHKGSASVVS------------------------GVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAV
        GW       W+ ++ + FR  +      V+S                             +G +IR+ +G  +      +     V++LEA A  EG+ +
Subjt:  GW------RWVADYLSHFRAFHHKGSASVVS------------------------GVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAV

Query:  AVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWLEELP
        A+++  S + +ESD+A V++ +  ++   +ELG I+    +L   ++  S+   RR  N VAH IA+ AL  D   VW EE+P
Subjt:  AVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWLEELP

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]8.3e-3428.91Show/hide
Query:  SIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLL-NSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASR---VE
        S+ I GDNWVP  P+L I+    +   +RV SL+ + +G W  +++R  F  D+A+ ILSIP  R    D+L+W+YEK   YSVRSGYKVA  +      
Subjt:  SIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLL-NSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASR---VE

Query:  GSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG---------------------WMCK-----WVVFDVGEERNRLFM--------
         S S++ E++ WW   W   IP+K+K+F+WRL  D LP+  NL KRG                     W+CK     W+    G+    L +        
Subjt:  GSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG---------------------WMCK-----WVVFDVGEERNRLFM--------

Query:  ------LCGSVEG--RRRNKELFEDRVSG----GKEESGWRWVADYLSHFRAFHHKGSASVVSGVIMN------------------------------IG
              LC  + G   +RN   F D        G E     W   Y   FR    +  ++ ++G + N                              +G
Subjt:  ------LCGSVEG--RRRNKELFEDRVSG----GKEESGWRWVADYLSHFRAFHHKGSASVVSGVIMN------------------------------IG

Query:  AVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVA
         +I N+RG+VM    K + ++  VD+ EA+A  EGL +A E+                 +     + SE G IV   K+        SF++ +R  N  A
Subjt:  AVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVA

Query:  HEIAKAALKSDLEGVWLEELPV
        H +A+ AL      +W+E+ P+
Subjt:  HEIAKAALKSDLEGVWLEELPV

XP_023904177.1 uncharacterized protein LOC112015942 [Quercus suber]7.5e-3529.74Show/hide
Query:  SIRIVGDNWVPRPPSLGIIHKVGVD-PEARVDSLLNSDG-WWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVA---CASRV
        SI+I+ D W+P+ P+  ++   GVD  E  V  L+  D   W  +LI   F  +DA+AI  IP  R R  D ++W + K+ RYSV+SGY VA     S  
Subjt:  SIRIVGDNWVPRPPSLGIIHKVGVD-PEARVDSLLNSDG-WWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVA---CASRV

Query:  EGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG---------------------WMCK---------------------------
            S   + Q+ W+ +W   +P+K+KIF WR    +LP+  NL KR                      W C                            
Subjt:  EGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG---------------------WMCK---------------------------

Query:  -WVVFDVGEERNRLFMLCGSVEGRRRNKELFEDRVSGGK-EESGW------RWVADYL----------------SHFRAFHHKGSASVVSGVIMN-----
         +++  +  E   LF++   +   +RN  L      GGK +E GW       W+ ++                 + +R   H          I N     
Subjt:  -WVVFDVGEERNRLFMLCGSVEGRRRNKELFEDRVSGGK-EESGW------RWVADYL----------------SHFRAFHHKGSASVVSGVIMN-----

Query:  -IGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRN
          GAVIRNE GEVM  L  +  S+   D  E +A R+ +  AV+  F+++ +E DS  V++ + S S + S +G +V DIK L  GL   SFSW  R  N
Subjt:  -IGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRN

Query:  LVAHEIAKAALKSDLEGVWLEELPVVA
         VAH +AK A   + +  W+E+ P VA
Subjt:  LVAHEIAKAALKSDLEGVWLEELPVVA

XP_030931246.1 uncharacterized protein LOC115957168 [Quercus lobata]2.0e-3229.12Show/hide
Query:  IRIVGDNWVPRPPSLGIIHK-VGVDPEARVDSLLN-SDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASR----V
        IR++ + W+P  PS  +IH+   V+ E RV  L++ + G WN+ LI   F  +DA AIL IP  R    D + W + +DE YSV+SGYKVAC  R    +
Subjt:  IRIVGDNWVPRPPSLGIIHK-VGVDPEARVDSLLN-SDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASR----V

Query:  EGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG---------------------WMC------------------------KWVV
        +G  S   + Q  WR +W   IP+K+K+FVWR  + +LP+ +NL ++                      W C                        + ++
Subjt:  EGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG---------------------WMC------------------------KWVV

Query:  FDVGEERNRLFMLCGSVEGRRRNKELFEDRVSGGKEESGWRWV---ADYLSHFRAFHHKGSASVVS-------------------------GVIMNIGAV
          +  E   LF +   +   +RN   F     GG  +   R V    +YL  F+    + + S VS                         G     G V
Subjt:  FDVGEERNRLFMLCGSVEGRRRNKELFEDRVSGGKEESGWRWV---ADYLSHFRAFHHKGSASVVS-------------------------GVIMNIGAV

Query:  IRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHE
        IRN  GEVM        ++ D +  E +A R+ L  A +  F+++ +E D++ V+  I S     S LG +  D+  LA GL   S S   RS N VAH 
Subjt:  IRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHE

Query:  IAKAALKSDLEGVWLEELP
        +A+ A   + + +W EE P
Subjt:  IAKAALKSDLEGVWLEELP

XP_030958437.1 uncharacterized protein LOC115980314 [Quercus lobata]9.2e-3328.65Show/hide
Query:  SIRIVGDNWVPRPPSLGIIH-KVGVDPEARVDSLLN-SDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVA---CASRV
        SIR++ D W+   P+  ++H     D E RV  L++ +   W+ EL+ + F  DDA+AI  IP      +D L+W + KD RYSVRSGY +A     S  
Subjt:  SIRIVGDNWVPRPPSLGIIH-KVGVDPEARVDSLLN-SDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVA---CASRV

Query:  EGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRGWM-------CK----------WVVFDVGEERNRLF---------MLCGSVEG
            S+    +  W  +W  ++P+K+K++ WR   D+ P+ +NL +R  +       CK          W    V ++RN +           LC   E 
Subjt:  EGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRGWM-------CK----------WVVFDVGEERNRLF---------MLCGSVEG

Query:  RRRNKELFEDRVS-GGKEESGWRWVADYLSHFRAFHHKGSASVVSGVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQME
                +D++S   +++S  +W    +  ++   +  +A          GA++RNERGEVM  L      + + +  EA+A R  +  A++  F+++ 
Subjt:  RRRNKELFEDRVS-GGKEESGWRWVADYLSHFRAFHHKGSASVVSGVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQME

Query:  VESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWLEELPVVAGNSFVEEL
        +E D+  V++ + S S + + LG + +DI+ L  GL + S S  +R  N  AH +A+ A     E +WLEE P  A ++  ++L
Subjt:  VESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWLEELPVVAGNSFVEEL

TrEMBL top hitse value%identityAlignment
A0A5C7H0P0 Uncharacterized protein2.0e-3328.98Show/hide
Query:  VDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLF
        V  L +  G WN ELIR  F  DDA  ILS+PR      D L WH++K   Y+VRSGYKVA   + +G  S++M++  WWRF+W C IP+K KIF W+ F
Subjt:  VDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLF

Query:  YDLLPSESNLRKRG---------------------WMCKWVV--------------FDVGEERNRLFMLCGSVEGRRRNK------ELFEDRVSGGKEES
           LP+ + L +R                      W C   V                V +  + +  L  SV+    N        L+ +R S     +
Subjt:  YDLLPSESNLRKRG---------------------WMCKWVV--------------FDVGEERNRLFMLCGSVEGRRRNK------ELFEDRVSGGKEES

Query:  GW------RWVADYLSHFRAFHHKGSASVVS------------------------GVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAV
        GW       W+ ++ + FR  +      V+S                             +G +IR+ +G  +      +     V++LEA A  EG+ +
Subjt:  GW------RWVADYLSHFRAFHHKGSASVVS------------------------GVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAV

Query:  AVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWLEELP
        A+++  S + +ESD+A V++ +  ++   +ELG I+    +L   ++  S+   RR  N VAH IA+ AL  D   VW EE+P
Subjt:  AVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWLEELP

A0A6J1DAR4 uncharacterized protein LOC1110189544.0e-3428.91Show/hide
Query:  SIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLL-NSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASR---VE
        S+ I GDNWVP  P+L I+    +   +RV SL+ + +G W  +++R  F  D+A+ ILSIP  R    D+L+W+YEK   YSVRSGYKVA  +      
Subjt:  SIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLL-NSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASR---VE

Query:  GSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG---------------------WMCK-----WVVFDVGEERNRLFM--------
         S S++ E++ WW   W   IP+K+K+F+WRL  D LP+  NL KRG                     W+CK     W+    G+    L +        
Subjt:  GSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG---------------------WMCK-----WVVFDVGEERNRLFM--------

Query:  ------LCGSVEG--RRRNKELFEDRVSG----GKEESGWRWVADYLSHFRAFHHKGSASVVSGVIMN------------------------------IG
              LC  + G   +RN   F D        G E     W   Y   FR    +  ++ ++G + N                              +G
Subjt:  ------LCGSVEG--RRRNKELFEDRVSG----GKEESGWRWVADYLSHFRAFHHKGSASVVSGVIMN------------------------------IG

Query:  AVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVA
         +I N+RG+VM    K + ++  VD+ EA+A  EGL +A E+                 +     + SE G IV   K+        SF++ +R  N  A
Subjt:  AVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVA

Query:  HEIAKAALKSDLEGVWLEELPV
        H +A+ AL      +W+E+ P+
Subjt:  HEIAKAALKSDLEGVWLEELPV

A0A803Q0L5 Uncharacterized protein2.2e-3227.32Show/hide
Query:  KSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSF
        +++R++ D W+PRP +  I  K  +     V  + + DG W+   I+ +F  DDA+ ILS+P       DK+MWHY K+  Y+V+SGYK+A +   E   
Subjt:  KSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSF

Query:  SNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRGWMCK-WVVFDVGEERNRL-------FMLCGSVEGRRRNKELF-----------EDR
        SN   +  WW+ +W  +IP K+K FVW+L Y+ LP+   L KRG   + W V    +E  RL       F++  + +  +   E F              
Subjt:  SNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRGWMCK-WVVFDVGEERNRL-------FMLCGSVEGRRRNKELF-----------EDR

Query:  VSGGKEESGWR---WVADYLSHFRAFHHKGSASVVS----------------------------GVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEA
        + GG          W   YL+ F      G A+ VS                            G +  IG VIR+  G  +     ++   L    LE 
Subjt:  VSGGKEESGWR---WVADYLSHFRAFHHKGSASVVS----------------------------GVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEA

Query:  MAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWL
         A+  GL V +     +  +ESD  + V+ I+ +   C ++  +++ I++L    S    S+  R  N VA+ +A  AL +    +W+
Subjt:  MAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWL

A0A803Q1K6 Uncharacterized protein9.0e-3427.74Show/hide
Query:  KSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSF
        +S+R++ D W+PRP +  +  +  +     V  L  +DG W+E  IR++F   DA  IL IP       DK++WHY K+  YSV+SGY++A +   E   
Subjt:  KSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSF

Query:  SNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG----------------------WMCK-----WVVFDVGE-------ERNRLFMLCG
        SN   I +WW+ +W    P KVK FVW++ ++ LP+  NL KRG                      W CK     W V  + +       E N   ++  
Subjt:  SNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG----------------------WMCK-----WVVFDVGE-------ERNRLFMLCG

Query:  SVEGRRRNKELF-----------EDRVSGG---KEESGWRWVADYLSHFRAFHHKGSASVVSGVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMA
        + E  +   E F              V GG   K E    W  ++L++FR    +   S  S          R++   V   L+ L  S L     E MA
Subjt:  SVEGRRRNKELF-----------EDRVSGG---KEESGWRWVADYLSHFRAFHHKGSASVVSGVIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMA

Query:  VREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWLEELPVVA
        +++G+ V ++    +  V++D  + V  I+++ N C ++  ++  I++L    +F   S+  R  N VAH +A  AL      +W+  +P  A
Subjt:  VREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAALKSDLEGVWLEELPVVA

A0A803QQT2 Uncharacterized protein5.6e-3627.1Show/hide
Query:  KSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSF
        +S+R++ D W+PRP +  +  +  +     V  L  +DG W+E  IR++F   D   IL IP       DK++WHY K   YSV+SGY++A +   E   
Subjt:  KSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSF

Query:  SNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG----------------------WMCK-----WVVFDVGE-------ERNRLFMLCG
        SN   I +WW+ +W  +IP KVK FVW++ ++ LP+  NL KRG                      W CK     W V  + +       E N   ++  
Subjt:  SNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG----------------------WMCK-----WVVFDVGE-------ERNRLFMLCG

Query:  SVEGRRRNKELF-----------EDRVSGG---KEESGWRWVADYLSHFRAFHHKGSASVVS------------------------GVIMNIGAVIRNER
        + E  +   E F              V GG   K E    W  ++L+ FR    +  +   S                        G+I  +G V+R+  
Subjt:  SVEGRRRNKELF-----------EDRVSGG---KEESGWRWVADYLSHFRAFHHKGSASVVS------------------------GVIMNIGAVIRNER

Query:  GEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAA
        G V+     +++  L    LE MA+++G+ V ++    +  VE+D  + V  I+++ N C ++  ++  I++L    SF   S+  R  N VAH +A  A
Subjt:  GEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIAKAA

Query:  LKSDLEGVWLEELPVVA
        L      +W+  +P  A
Subjt:  LKSDLEGVWLEELPVVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein6.0e-0624.68Show/hide
Query:  IRKSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDG---WWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGY-------
        IR  +  + D+  PRP +    +K     E  +++L    G   +W++  I       D   I  I   + +  DK++W+Y     Y+VRSGY       
Subjt:  IRKSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDG---WWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGY-------

Query:  --KVACASRVEGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG
           +   +   GS      I       W   I  K+K F+WR     L +   L  RG
Subjt:  --KVACASRVEGSFSNTMEIQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRG

AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-0433.33Show/hide
Query:  MNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSR
        +  G VIRN      L      R++    + EA+A+   L  A  +  +++ + SDS +++  I SES      G+I  DI +L+ G +  SFS+  RS 
Subjt:  MNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSR

Query:  NLVAHEIAKAALKS
        N VA E+AK++L S
Subjt:  NLVAHEIAKAALKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCTATCAGAAAGTCTATTAGAATTGTGGGTGATAACTGGGTTCCTAGACCTCCTTCTTTAGGAATTATTCACAAGGTGGGTGTTGATCCGGAGGCAAGGGTGGA
TAGCTTGTTGAACTCCGATGGTTGGTGGAATGAGGAGTTGATTCGGGCAATGTTTAAAGATGATGATGCGCAGGCTATTCTGAGTATCCCGAGGCCTAGATTGAGGCATA
CTGATAAGCTTATGTGGCATTATGAGAAAGATGAGAGGTATTCTGTGAGGAGTGGATACAAGGTGGCTTGTGCTAGTAGGGTGGAGGGGAGTTTTTCTAATACTATGGAG
ATTCAAAAGTGGTGGAGGTTCATGTGGGCTTGTCAGATTCCAAGCAAAGTGAAAATTTTTGTGTGGAGGTTGTTCTATGACCTTCTTCCTTCTGAGAGCAACTTGAGGAA
AAGGGGGTGGATGTGCAAATGGGTTGTGTTCGATGTGGGAGAAGAGAGGAATCGACTTTTCATGCTCTGTGGGAGTGTAGAGGGTCGAAGGAGAAATAAGGAACTGTTTG
AGGATCGTGTTTCAGGGGGAAAGGAGGAGAGTGGTTGGCGATGGGTTGCTGACTACCTATCCCATTTTAGGGCCTTTCACCATAAGGGCAGTGCAAGTGTAGTGAGTGGG
GTGATAATGAATATTGGGGCAGTGATCAGAAATGAAAGAGGGGAAGTGATGCTTACCTTGATGAAGCTGATCAGATCTATGCTTGATGTCGATGTTTTGGAGGCGATGGC
TGTTCGCGAAGGGCTGGCAGTTGCTGTTGAGGTCGACTTCTCGCAGATGGAGGTGGAGTCGGATTCGGCTAGAGTGGTGAGGAGGATCAGATCTGAGTCTAATGAATGTT
CGGAGTTGGGTTTAATAGTAGAAGATATCAAGAGTTTGGCCGGTGGGTTGAGCTTTTGCTCGTTTAGCTGGTGCCGGCGATCGAGGAACCTGGTGGCACACGAGATAGCG
AAAGCAGCGTTGAAGTCGGATCTGGAAGGGGTGTGGTTGGAGGAGTTGCCGGTGGTTGCTGGGAATTCCTTCGTTGAAGAGCTGAGACCTTTCGATTTGGGGGCTAGGGA
TTTCTGTAATAATTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCTATCAGAAAGTCTATTAGAATTGTGGGTGATAACTGGGTTCCTAGACCTCCTTCTTTAGGAATTATTCACAAGGTGGGTGTTGATCCGGAGGCAAGGGTGGA
TAGCTTGTTGAACTCCGATGGTTGGTGGAATGAGGAGTTGATTCGGGCAATGTTTAAAGATGATGATGCGCAGGCTATTCTGAGTATCCCGAGGCCTAGATTGAGGCATA
CTGATAAGCTTATGTGGCATTATGAGAAAGATGAGAGGTATTCTGTGAGGAGTGGATACAAGGTGGCTTGTGCTAGTAGGGTGGAGGGGAGTTTTTCTAATACTATGGAG
ATTCAAAAGTGGTGGAGGTTCATGTGGGCTTGTCAGATTCCAAGCAAAGTGAAAATTTTTGTGTGGAGGTTGTTCTATGACCTTCTTCCTTCTGAGAGCAACTTGAGGAA
AAGGGGGTGGATGTGCAAATGGGTTGTGTTCGATGTGGGAGAAGAGAGGAATCGACTTTTCATGCTCTGTGGGAGTGTAGAGGGTCGAAGGAGAAATAAGGAACTGTTTG
AGGATCGTGTTTCAGGGGGAAAGGAGGAGAGTGGTTGGCGATGGGTTGCTGACTACCTATCCCATTTTAGGGCCTTTCACCATAAGGGCAGTGCAAGTGTAGTGAGTGGG
GTGATAATGAATATTGGGGCAGTGATCAGAAATGAAAGAGGGGAAGTGATGCTTACCTTGATGAAGCTGATCAGATCTATGCTTGATGTCGATGTTTTGGAGGCGATGGC
TGTTCGCGAAGGGCTGGCAGTTGCTGTTGAGGTCGACTTCTCGCAGATGGAGGTGGAGTCGGATTCGGCTAGAGTGGTGAGGAGGATCAGATCTGAGTCTAATGAATGTT
CGGAGTTGGGTTTAATAGTAGAAGATATCAAGAGTTTGGCCGGTGGGTTGAGCTTTTGCTCGTTTAGCTGGTGCCGGCGATCGAGGAACCTGGTGGCACACGAGATAGCG
AAAGCAGCGTTGAAGTCGGATCTGGAAGGGGTGTGGTTGGAGGAGTTGCCGGTGGTTGCTGGGAATTCCTTCGTTGAAGAGCTGAGACCTTTCGATTTGGGGGCTAGGGA
TTTCTGTAATAATTCTTAG
Protein sequenceShow/hide protein sequence
MLAIRKSIRIVGDNWVPRPPSLGIIHKVGVDPEARVDSLLNSDGWWNEELIRAMFKDDDAQAILSIPRPRLRHTDKLMWHYEKDERYSVRSGYKVACASRVEGSFSNTME
IQKWWRFMWACQIPSKVKIFVWRLFYDLLPSESNLRKRGWMCKWVVFDVGEERNRLFMLCGSVEGRRRNKELFEDRVSGGKEESGWRWVADYLSHFRAFHHKGSASVVSG
VIMNIGAVIRNERGEVMLTLMKLIRSMLDVDVLEAMAVREGLAVAVEVDFSQMEVESDSARVVRRIRSESNECSELGLIVEDIKSLAGGLSFCSFSWCRRSRNLVAHEIA
KAALKSDLEGVWLEELPVVAGNSFVEELRPFDLGARDFCNNS