; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014965 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014965
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr12:6312390..6316425
RNA-Seq ExpressionLag0014965
SyntenyLag0014965
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.2e-7236.53Show/hide
Query:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC
        E   +VV+VMM +  T E  M EM+  IN LMK +EE+D +IA LK Q++     ESSQT V+K  +KGK  V+++QP Q S SVASLS+QQLQDMI N 
Subjt:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC

Query:  IRAQYGGPTQDSLLYSKPYTKRIDNLRMAIGY--------------------------------------------------------------------
        IRAQYGGP Q S +YSKPYTKRIDNLRM +GY                                                                    
Subjt:  IRAQYGGPTQDSLLYSKPYTKRIDNLRMAIGY--------------------------------------------------------------------

Query:  --------------------------------------------NARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-----EESMVV
                                                      RTFEELAT AHDM+LSIA+R  +D L+  TR  K  +ND + I      ESM+V
Subjt:  --------------------------------------------NARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-----EESMVV

Query:  NTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILK
          T  KS SK K+  +  +H        TL+ERQKK+Y FPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDD  YCKY+RVI H  E+CFVL +LI K
Subjt:  NTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILK

Query:  LAMEGKIELDLDEVAQSS--------------------------------LATIKGKSKHQRKKNPKKP-------------------------------
        LA E KIELD+DEVAQ++                                L   + K+     +N ++P                               
Subjt:  LAMEGKIELDLDEVAQSS--------------------------------LATIKGKSKHQRKKNPKKP-------------------------------

Query:  ---------------------QPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPS--TFQRRFLEGETKSHYL
                             + K++TSVFD IKP TTR SVFQR+SM   +EENQC   T  + SAF+RLS+S SKK RPS  TF R  +  + +   +
Subjt:  ---------------------QPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPS--TFQRRFLEGETKSHYL

Query:  DQSYKSRSDQDHDEDK
                 +++D+DK
Subjt:  DQSYKSRSDQDHDEDK

KAA0051896.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-7352.74Show/hide
Query:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC
        E   DV+ VMM +  T E  M EM+  +N L+K +EE+D +I  L+ Q++ +   ESSQT V+K  +KGK  VQ++QP Q S SVASL +QQLQDMI N 
Subjt:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC

Query:  IRAQYGGPTQDSLLYSKPYTKRIDNLRM----------------------AIGYNARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-
        IRAQYGGP Q S +YSKPYTKRIDNLRM                       +G   RTFEELAT AHDMELSIA++  +D L+  TR  K  +ND + I 
Subjt:  IRAQYGGPTQDSLLYSKPYTKRIDNLRM----------------------AIGYNARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-

Query:  ----EESMVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFER
             ESM+V  T  KS SK K+  +  +H        TL+ERQKK+Y FPD+D+ DMLEQL+E QLI+LP+CKRPE+  KVDD  YCKY+RVI HP E+
Subjt:  ----EESMVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFER

Query:  CFVLNDLILKLAMEGKIELDLDEVAQSS
        CFVL +LILKLA E KIEL++DEVAQ++
Subjt:  CFVLNDLILKLAMEGKIELDLDEVAQSS

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]2.7e-7051.3Show/hide
Query:  PDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQPQCSASVASLSIQQLQDMITNCIR
        P  ++++VM+T+  T E+RM ++++ +N  MK +EE+D +IA LK+ IE++   ESS T  IKN NKGK  +Q+ QPQ S S+ASLS+Q+LQ+MI N I+
Subjt:  PDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQPQCSASVASLSIQQLQDMITNCIR

Query:  AQYGGPTQDSLLYSKPYTKRI--DNLRMAIGYNARTFEELATSAHDMELSIASRENQDLLLPNTRKEGMNDEET-------IEESMVVNTTLPKSSSKEK
         QYG P Q  +  +      +    L   +G   RTFEELAT A DMELSIA+R N DLL+P  RKE    + T        +E+MVV+TT  K  SKEK
Subjt:  AQYGGPTQDSLLYSKPYTKRI--DNLRMAIGYNARTFEELATSAHDMELSIASRENQDLLLPNTRKEGMNDEET-------IEESMVVNTTLPKSSSKEK

Query:  -----QQTNGTHHLTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEV
             Q        TLKERQ+KIY FPD+D+PDML+QLLE QLI+LP+CKRP EM KV+D  YCKY+RVI HP E+CFVL +LILKLA++ KIEL+LD+V
Subjt:  -----QQTNGTHHLTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEV

Query:  AQSSLATI
        AQ++ A +
Subjt:  AQSSLATI

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]3.9e+0050Show/hide
Query:  KNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASK
        K  KK + +R +SVFDRI     R SVFQR+S   T++ NQ S  +S R SAFQRL+ +A K
Subjt:  KNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASK

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-7335.91Show/hide
Query:  PDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQPQCSASVASLSIQQLQDMITNCIR
        P  ++++VM+T   T E RM E+++ +N LMK +EE+D +IA LK+ IE++   ESS    +KN +KGK  +Q+ QPQ S S+ASLS+QQLQ+MI + I+
Subjt:  PDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQPQCSASVASLSIQQLQDMITNCIR

Query:  AQYGGPTQDSLLYSKPYTKRIDNLRMAIGY----------------------------------------------------------------------
         QYGGP Q   LY KPYTKRIDNLRM  GY                                                                      
Subjt:  AQYGGPTQDSLLYSKPYTKRIDNLRMAIGY----------------------------------------------------------------------

Query:  --------------------------------------------------------------------NARTFEELATSAHDMELSIASRENQDLLLPNT
                                                                              RTFEELAT AHDMELSIA+R  +D L+P +
Subjt:  --------------------------------------------------------------------NARTFEELATSAHDMELSIASRENQDLLLPNT

Query:  RKEGMNDEET-------IEESMVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLK
        R +    ++T       I+ESMVV+ T  KS SK K+      H        TLKERQ+K+Y FPD+D+ DMLEQLLE QLI+LP+CKRPE+  KVDD  
Subjt:  RKEGMNDEET-------IEESMVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLK

Query:  YCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQSSLA------TIKGKSKH------------------------------------------
        YCKY+RVI HP E+CFVL +LILKLA E KIELD+DEVAQ++ A       IKGK +                                           
Subjt:  YCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQSSLA------TIKGKSKH------------------------------------------

Query:  ---QRKKNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPST--FQRRFLEGETKSHYLDQSYKSRSD
             K+     +  ++TSVFDRIKP TTR SVFQR+S+   EEENQC      R S  +RLS+S  KK RPST  F R  +  + +   +  S      
Subjt:  ---QRKKNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPST--FQRRFLEGETKSHYLDQSYKSRSD

Query:  QDHDEDK
        +++D+DK
Subjt:  QDHDEDK

TYK23838.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-7036.48Show/hide
Query:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC
        E   +VV+VMM +  T E  M EM+  IN LMK +EE+D +IA LK Q++     ESSQT V+K  +KGK  VQ++QP Q S SVASLS+QQLQDMI N 
Subjt:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC

Query:  IRAQYGGPTQDSLLYSKPYTKRIDNLRMAI----------------------------------------------------------------------
        IRAQYGGP Q S +YSKPYTKRIDNLRM +                                                                      
Subjt:  IRAQYGGPTQDSLLYSKPYTKRIDNLRMAI----------------------------------------------------------------------

Query:  -----------GYNARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-----EESMVVNTTLPKSSSKEKQQTNGTHH-------LTLK
                   G   RTFEELAT AHDMELSI +R  +D L+  TR  K  +ND + I      ESM+V  T  KS SK K+  +  +H        TL+
Subjt:  -----------GYNARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-----EESMVVNTTLPKSSSKEKQQTNGTHH-------LTLK

Query:  ERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQS--------------
        ERQKK+Y F D+DI DMLEQL+E QLI+LP+CKR E+  +VDD  YCKY++VI HP E+CFVL +LILKLA E +IELD+DEVAQ+              
Subjt:  ERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQS--------------

Query:  ----------------------------------------------------------------------SLATIKGKSKHQRKKNPKKPQP--------
                                                                              S   I  K K +R K   KP+P        
Subjt:  ----------------------------------------------------------------------SLATIKGKSKHQRKKNPKKPQP--------

Query:  ------------------------------------------------------KRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQ
                                                              K++TS FDRIKP TTR SVFQR+SM   +EENQC  ST  R  AF+
Subjt:  ------------------------------------------------------KRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQ

Query:  RLSVSASKKSRPST
        RLS+S SKK RPST
Subjt:  RLSVSASKKSRPST

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein1.1e-7236.53Show/hide
Query:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC
        E   +VV+VMM +  T E  M EM+  IN LMK +EE+D +IA LK Q++     ESSQT V+K  +KGK  V+++QP Q S SVASLS+QQLQDMI N 
Subjt:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC

Query:  IRAQYGGPTQDSLLYSKPYTKRIDNLRMAIGY--------------------------------------------------------------------
        IRAQYGGP Q S +YSKPYTKRIDNLRM +GY                                                                    
Subjt:  IRAQYGGPTQDSLLYSKPYTKRIDNLRMAIGY--------------------------------------------------------------------

Query:  --------------------------------------------NARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-----EESMVV
                                                      RTFEELAT AHDM+LSIA+R  +D L+  TR  K  +ND + I      ESM+V
Subjt:  --------------------------------------------NARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-----EESMVV

Query:  NTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILK
          T  KS SK K+  +  +H        TL+ERQKK+Y FPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDD  YCKY+RVI H  E+CFVL +LI K
Subjt:  NTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILK

Query:  LAMEGKIELDLDEVAQSS--------------------------------LATIKGKSKHQRKKNPKKP-------------------------------
        LA E KIELD+DEVAQ++                                L   + K+     +N ++P                               
Subjt:  LAMEGKIELDLDEVAQSS--------------------------------LATIKGKSKHQRKKNPKKP-------------------------------

Query:  ---------------------QPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPS--TFQRRFLEGETKSHYL
                             + K++TSVFD IKP TTR SVFQR+SM   +EENQC   T  + SAF+RLS+S SKK RPS  TF R  +  + +   +
Subjt:  ---------------------QPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPS--TFQRRFLEGETKSHYL

Query:  DQSYKSRSDQDHDEDK
                 +++D+DK
Subjt:  DQSYKSRSDQDHDEDK

A0A5A7UJR2 Reverse transcriptase1.3e-7051.3Show/hide
Query:  PDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQPQCSASVASLSIQQLQDMITNCIR
        P  ++++VM+T+  T E+RM ++++ +N  MK +EE+D +IA LK+ IE++   ESS T  IKN NKGK  +Q+ QPQ S S+ASLS+Q+LQ+MI N I+
Subjt:  PDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQPQCSASVASLSIQQLQDMITNCIR

Query:  AQYGGPTQDSLLYSKPYTKRI--DNLRMAIGYNARTFEELATSAHDMELSIASRENQDLLLPNTRKEGMNDEET-------IEESMVVNTTLPKSSSKEK
         QYG P Q  +  +      +    L   +G   RTFEELAT A DMELSIA+R N DLL+P  RKE    + T        +E+MVV+TT  K  SKEK
Subjt:  AQYGGPTQDSLLYSKPYTKRI--DNLRMAIGYNARTFEELATSAHDMELSIASRENQDLLLPNTRKEGMNDEET-------IEESMVVNTTLPKSSSKEK

Query:  -----QQTNGTHHLTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEV
             Q        TLKERQ+KIY FPD+D+PDML+QLLE QLI+LP+CKRP EM KV+D  YCKY+RVI HP E+CFVL +LILKLA++ KIEL+LD+V
Subjt:  -----QQTNGTHHLTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEV

Query:  AQSSLATI
        AQ++ A +
Subjt:  AQSSLATI

A0A5A7UJR2 Reverse transcriptase1.9e+0050Show/hide
Query:  KNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASK
        K  KK + +R +SVFDRI     R SVFQR+S   T++ NQ S  +S R SAFQRL+ +A K
Subjt:  KNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASK

A0A5A7URH1 Ty3-gypsy retrotransposon protein5.8e-7435.91Show/hide
Query:  PDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQPQCSASVASLSIQQLQDMITNCIR
        P  ++++VM+T   T E RM E+++ +N LMK +EE+D +IA LK+ IE++   ESS    +KN +KGK  +Q+ QPQ S S+ASLS+QQLQ+MI + I+
Subjt:  PDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQPQCSASVASLSIQQLQDMITNCIR

Query:  AQYGGPTQDSLLYSKPYTKRIDNLRMAIGY----------------------------------------------------------------------
         QYGGP Q   LY KPYTKRIDNLRM  GY                                                                      
Subjt:  AQYGGPTQDSLLYSKPYTKRIDNLRMAIGY----------------------------------------------------------------------

Query:  --------------------------------------------------------------------NARTFEELATSAHDMELSIASRENQDLLLPNT
                                                                              RTFEELAT AHDMELSIA+R  +D L+P +
Subjt:  --------------------------------------------------------------------NARTFEELATSAHDMELSIASRENQDLLLPNT

Query:  RKEGMNDEET-------IEESMVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLK
        R +    ++T       I+ESMVV+ T  KS SK K+      H        TLKERQ+K+Y FPD+D+ DMLEQLLE QLI+LP+CKRPE+  KVDD  
Subjt:  RKEGMNDEET-------IEESMVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLK

Query:  YCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQSSLA------TIKGKSKH------------------------------------------
        YCKY+RVI HP E+CFVL +LILKLA E KIELD+DEVAQ++ A       IKGK +                                           
Subjt:  YCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQSSLA------TIKGKSKH------------------------------------------

Query:  ---QRKKNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPST--FQRRFLEGETKSHYLDQSYKSRSD
             K+     +  ++TSVFDRIKP TTR SVFQR+S+   EEENQC      R S  +RLS+S  KK RPST  F R  +  + +   +  S      
Subjt:  ---QRKKNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPST--FQRRFLEGETKSHYLDQSYKSRSD

Query:  QDHDEDK
        +++D+DK
Subjt:  QDHDEDK

A0A5D3BLM3 Retrotransposon gag protein7.5e-7452.74Show/hide
Query:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC
        E   DV+ VMM +  T E  M EM+  +N L+K +EE+D +I  L+ Q++ +   ESSQT V+K  +KGK  VQ++QP Q S SVASL +QQLQDMI N 
Subjt:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC

Query:  IRAQYGGPTQDSLLYSKPYTKRIDNLRM----------------------AIGYNARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-
        IRAQYGGP Q S +YSKPYTKRIDNLRM                       +G   RTFEELAT AHDMELSIA++  +D L+  TR  K  +ND + I 
Subjt:  IRAQYGGPTQDSLLYSKPYTKRIDNLRM----------------------AIGYNARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-

Query:  ----EESMVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFER
             ESM+V  T  KS SK K+  +  +H        TL+ERQKK+Y FPD+D+ DMLEQL+E QLI+LP+CKRPE+  KVDD  YCKY+RVI HP E+
Subjt:  ----EESMVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFER

Query:  CFVLNDLILKLAMEGKIELDLDEVAQSS
        CFVL +LILKLA E KIEL++DEVAQ++
Subjt:  CFVLNDLILKLAMEGKIELDLDEVAQSS

A0A5D3DK07 Ty3-gypsy retrotransposon protein6.0e-7136.48Show/hide
Query:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC
        E   +VV+VMM +  T E  M EM+  IN LMK +EE+D +IA LK Q++     ESSQT V+K  +KGK  VQ++QP Q S SVASLS+QQLQDMI N 
Subjt:  EPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQDDQP-QCSASVASLSIQQLQDMITNC

Query:  IRAQYGGPTQDSLLYSKPYTKRIDNLRMAI----------------------------------------------------------------------
        IRAQYGGP Q S +YSKPYTKRIDNLRM +                                                                      
Subjt:  IRAQYGGPTQDSLLYSKPYTKRIDNLRMAI----------------------------------------------------------------------

Query:  -----------GYNARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-----EESMVVNTTLPKSSSKEKQQTNGTHH-------LTLK
                   G   RTFEELAT AHDMELSI +R  +D L+  TR  K  +ND + I      ESM+V  T  KS SK K+  +  +H        TL+
Subjt:  -----------GYNARTFEELATSAHDMELSIASRENQDLLLPNTR--KEGMNDEETI-----EESMVVNTTLPKSSSKEKQQTNGTHH-------LTLK

Query:  ERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQS--------------
        ERQKK+Y F D+DI DMLEQL+E QLI+LP+CKR E+  +VDD  YCKY++VI HP E+CFVL +LILKLA E +IELD+DEVAQ+              
Subjt:  ERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQS--------------

Query:  ----------------------------------------------------------------------SLATIKGKSKHQRKKNPKKPQP--------
                                                                              S   I  K K +R K   KP+P        
Subjt:  ----------------------------------------------------------------------SLATIKGKSKHQRKKNPKKPQP--------

Query:  ------------------------------------------------------KRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQ
                                                              K++TS FDRIKP TTR SVFQR+SM   +EENQC  ST  R  AF+
Subjt:  ------------------------------------------------------KRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQ

Query:  RLSVSASKKSRPST
        RLS+S SKK RPST
Subjt:  RLSVSASKKSRPST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTGGCGTTGCAAGAAGATACAACTTCTATCGTTGCAGGCCAAGAAACAACCCGTGGGGGAATATACTAATGACAAGTTTCTTGTTAAGTATAACCTTTCGTTTGA
ACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGTTGAGATGCAGGAACACATCAACACCTTAATGAAGGCGATTGAAGAAA
AAGATTCTCAAATTGCGCAACTAAAGAGCCAAATTGAGAACCAACATATCGTCGAATCAAGTCAAACCCAAGTCATAAAAAATCATAACAAAGGAAAGACTACAGTGCAA
GATGATCAGCCACAGTGTTCTGCTTCGGTCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTATGGTGGACCTACTCAAGATTC
CCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAATGGCAATCGGGTATAACGCCCGCACCTTTGAAGAACTAGCAACTAGCGCCCACGATATGGAGC
TAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTACTCCCTAACACGAGGAAAGAAGGAATGAACGACGAAGAGACTATAGAAGAATCTATGGTTGTAAACACAACCCTT
CCCAAGTCGTCTTCGAAAGAAAAACAACAAACAAATGGAACGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCATTTTCCTGATGCCGACATCCCTGATAT
GTTGGAACAACTACTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAAGTATTGCAAGTATTATCGAGTTATTG
GTCATCCATTCGAAAGATGTTTCGTCCTAAATGACTTAATTCTAAAGCTAGCTATGGAAGGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAGTCTTGCTACA
ATCAAAGGAAAGAGCAAACATCAAAGAAAGAAGAATCCTAAGAAACCTCAACCTAAGAGGAAGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGT
ATTCCAAAGAATGAGTATGGTCGCAACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCCGTTCGACCTTCAGCTTTCCAAAGGTTAAGTGTCTCCGCATCGAAGAAAA
GTAGACCTTCAACTTTCCAAAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGATCTGATCAAGACCATGATGAAGATAAGAGC
CTCAAGTTCGGTGTTTTCACTCACCCTAAGTTCGTTGTTCCTTTTCTTCAAGTTCGAAGGTTCTCACGTGCTTCACTGGAGTTTCTTCTCTCCGAGTTCGAAGGTTCTCA
CGCACTTCGTTGGAGTTCCTTCTCCAAGTTTGAAGGTTCTCCGTTGCACGCTCATGTGTTGCTCATTCTCCAAGTTCGAAGGTTGTGCTGCTTCCTTCTCCAAGTTCGAA
GGTTCTGGCGATGCGCTGCTTCCTTCACCAAGTTTGAAGGTTCCTACTCTGCGTCGTTTCGCTGTTCCTTCTCCAAGTTCAAAGGTTCACGCGACGCTACTTTGTTGTTC
CTTCTTCAAGTTCGAAGGTTCTCACGATGCGTTATTGCGTTGCTTCCTTCTCCAAGTTCGAAAGTTCGCACGTTGTGCTGCTACGCGCTGCTCCCTTCTCTCTCCAAGTT
CGAAGGTTCTAACGTTGCGCTGCTTCCTTCACGAAGTTCAAAGGTTCCTCATGCGCTATGCTACTGTTCCTTCTCCAAGTTCGAAGGTTTTCACGTGTTCTCATGTTGTT
ACGCTACAGCTCCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCACTTCGCTGCAGTTTCTTCTCTCCAAGTTTGAAGGTTCTCATGCGCTTCGCAGCAGTTCCTTCT
CTCCAAGTTCGAGGGTGCTTACGTTGTTCGCTACTGCATTGTTCCTTCTCCAAGTTCGAAGGTTCTCCGATGCACGCTCTTGCGTTGCTCCTTCTCCAAGTTCGAAGGTT
CTCGGCTTTCGTTGTTGCGCTACTTCCTTCTTCAAGTTCGAAGGTTCTCACGTTGCGCTATTGTGCTCCTTCCTTCTCTAAGTTCGAAGGTTTTGACGTTGTGTTGCTTC
CTTCTCCAAGTTTGAAGGTTCTCATGCCACACTGCTTCGCTGCTCATTCTCCAAGTCTGAAGGTTTGCACGTGTTTTTTAAGTTGCTTCGTTGAAGTTTCTTCTCCAAGT
TCAAAGGTTTTCACATTGCTTCGCTGCAGATCTTTCTCTCCAAGTTCGAAGGTTCTCAAGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGGTTCCTTTCTCCAA
GTTCGAAGGGGTTCTCATGCAGCACCTTCCTCCAAGTTCGAAGGTTCTCACGCTGCTTCTTCCTCACATTGCTTCGCTACAGTTCTTTCCTCCGAAGGTTCTAACGCTGC
TTCTGTTTCCTCATGTTGCTTCGCTGCAGTTCCTTCCTCCTACAGTTCCTTGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGTTGTTGTTCCTTCTCTAAA
TTCGAAGGTTCTCACGCTACGTTGTTCGAAGGTTCTTCCTCTTACACTGTATTGCATCGTTGTTCCTTCAACAAGTTCGAAGGTTCTTACGTTGAAGCAGTAAAGGAGCC
CAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTGGCGTTGCAAGAAGATACAACTTCTATCGTTGCAGGCCAAGAAACAACCCGTGGGGGAATATACTAATGACAAGTTTCTTGTTAAGTATAACCTTTCGTTTGA
ACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGTTGAGATGCAGGAACACATCAACACCTTAATGAAGGCGATTGAAGAAA
AAGATTCTCAAATTGCGCAACTAAAGAGCCAAATTGAGAACCAACATATCGTCGAATCAAGTCAAACCCAAGTCATAAAAAATCATAACAAAGGAAAGACTACAGTGCAA
GATGATCAGCCACAGTGTTCTGCTTCGGTCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTATGGTGGACCTACTCAAGATTC
CCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAATGGCAATCGGGTATAACGCCCGCACCTTTGAAGAACTAGCAACTAGCGCCCACGATATGGAGC
TAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTACTCCCTAACACGAGGAAAGAAGGAATGAACGACGAAGAGACTATAGAAGAATCTATGGTTGTAAACACAACCCTT
CCCAAGTCGTCTTCGAAAGAAAAACAACAAACAAATGGAACGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCATTTTCCTGATGCCGACATCCCTGATAT
GTTGGAACAACTACTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAAGTATTGCAAGTATTATCGAGTTATTG
GTCATCCATTCGAAAGATGTTTCGTCCTAAATGACTTAATTCTAAAGCTAGCTATGGAAGGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAGTCTTGCTACA
ATCAAAGGAAAGAGCAAACATCAAAGAAAGAAGAATCCTAAGAAACCTCAACCTAAGAGGAAGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGT
ATTCCAAAGAATGAGTATGGTCGCAACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCCGTTCGACCTTCAGCTTTCCAAAGGTTAAGTGTCTCCGCATCGAAGAAAA
GTAGACCTTCAACTTTCCAAAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGATCTGATCAAGACCATGATGAAGATAAGAGC
CTCAAGTTCGGTGTTTTCACTCACCCTAAGTTCGTTGTTCCTTTTCTTCAAGTTCGAAGGTTCTCACGTGCTTCACTGGAGTTTCTTCTCTCCGAGTTCGAAGGTTCTCA
CGCACTTCGTTGGAGTTCCTTCTCCAAGTTTGAAGGTTCTCCGTTGCACGCTCATGTGTTGCTCATTCTCCAAGTTCGAAGGTTGTGCTGCTTCCTTCTCCAAGTTCGAA
GGTTCTGGCGATGCGCTGCTTCCTTCACCAAGTTTGAAGGTTCCTACTCTGCGTCGTTTCGCTGTTCCTTCTCCAAGTTCAAAGGTTCACGCGACGCTACTTTGTTGTTC
CTTCTTCAAGTTCGAAGGTTCTCACGATGCGTTATTGCGTTGCTTCCTTCTCCAAGTTCGAAAGTTCGCACGTTGTGCTGCTACGCGCTGCTCCCTTCTCTCTCCAAGTT
CGAAGGTTCTAACGTTGCGCTGCTTCCTTCACGAAGTTCAAAGGTTCCTCATGCGCTATGCTACTGTTCCTTCTCCAAGTTCGAAGGTTTTCACGTGTTCTCATGTTGTT
ACGCTACAGCTCCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCACTTCGCTGCAGTTTCTTCTCTCCAAGTTTGAAGGTTCTCATGCGCTTCGCAGCAGTTCCTTCT
CTCCAAGTTCGAGGGTGCTTACGTTGTTCGCTACTGCATTGTTCCTTCTCCAAGTTCGAAGGTTCTCCGATGCACGCTCTTGCGTTGCTCCTTCTCCAAGTTCGAAGGTT
CTCGGCTTTCGTTGTTGCGCTACTTCCTTCTTCAAGTTCGAAGGTTCTCACGTTGCGCTATTGTGCTCCTTCCTTCTCTAAGTTCGAAGGTTTTGACGTTGTGTTGCTTC
CTTCTCCAAGTTTGAAGGTTCTCATGCCACACTGCTTCGCTGCTCATTCTCCAAGTCTGAAGGTTTGCACGTGTTTTTTAAGTTGCTTCGTTGAAGTTTCTTCTCCAAGT
TCAAAGGTTTTCACATTGCTTCGCTGCAGATCTTTCTCTCCAAGTTCGAAGGTTCTCAAGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGGTTCCTTTCTCCAA
GTTCGAAGGGGTTCTCATGCAGCACCTTCCTCCAAGTTCGAAGGTTCTCACGCTGCTTCTTCCTCACATTGCTTCGCTACAGTTCTTTCCTCCGAAGGTTCTAACGCTGC
TTCTGTTTCCTCATGTTGCTTCGCTGCAGTTCCTTCCTCCTACAGTTCCTTGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGTTGTTGTTCCTTCTCTAAA
TTCGAAGGTTCTCACGCTACGTTGTTCGAAGGTTCTTCCTCTTACACTGTATTGCATCGTTGTTCCTTCAACAAGTTCGAAGGTTCTTACGTTGAAGCAGTAAAGGAGCC
CAAGTGA
Protein sequenceShow/hide protein sequence
MNWRCKKIQLLSLQAKKQPVGEYTNDKFLVKYNLSFEPDSDVVTVMMTETRTMEERMVEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHNKGKTTVQ
DDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRMAIGYNARTFEELATSAHDMELSIASRENQDLLLPNTRKEGMNDEETIEESMVVNTTL
PKSSSKEKQQTNGTHHLTLKERQKKIYHFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYYRVIGHPFERCFVLNDLILKLAMEGKIELDLDEVAQSSLAT
IKGKSKHQRKKNPKKPQPKRKTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSASKKSRPSTFQRRFLEGETKSHYLDQSYKSRSDQDHDEDKS
LKFGVFTHPKFVVPFLQVRRFSRASLEFLLSEFEGSHALRWSSFSKFEGSPLHAHVLLILQVRRLCCFLLQVRRFWRCAASFTKFEGSYSASFRCSFSKFKGSRDATLLF
LLQVRRFSRCVIALLPSPSSKVRTLCCYALLPSLSKFEGSNVALLPSRSSKVPHALCYCSFSKFEGFHVFSCCYATAPVPSSKFEGSHALRCSFFSPSLKVLMRFAAVPS
LQVRGCLRCSLLHCSFSKFEGSPMHALALLLLQVRRFSAFVVALLPSSSSKVLTLRYCAPSFSKFEGFDVVLLPSPSLKVLMPHCFAAHSPSLKVCTCFLSCFVEVSSPS
SKVFTLLRCRSFSPSSKVLKLLRCSSFLQVRRVPFSKFEGVLMQHLPPSSKVLTLLLPHIASLQFFPPKVLTLLLFPHVASLQFLPPTVPCSFSPSSKVLTLLRCCSFSK
FEGSHATLFEGSSSYTVLHRCSFNKFEGSYVEAVKEPK