; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0014984 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014984
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr12:6524532..6525480
RNA-Seq ExpressionLag0014984
SyntenyLag0014984
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]4.4e-5641.45Show/hide
Query:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIR-----SKEWF-----------NKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-
        + L  V  +F+GRW E+ RY  ++  +V VP   + QEF  CI+     + E F           N S +IRI DDKDV W M  +     + + +V D 
Subjt:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIR-----SKEWF-----------NKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-

Query:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD
                          +E  +    IID    E     I +   S+F+ K  L+KAIY+LAL ++F+L T+ SN+ SF + CKD +C WY+ AS    
Subjt:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD

Query:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI
          +W+V KF D H C +D+VKNDH+QAT+ +V EC K   K+NDK  CRP DVINYM+  H VN+SY+KAWRGRE+AL +IRG+ E SYA++ AFS  LI
Subjt:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI

Query:  EKNP
          NP
Subjt:  EKNP

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]1.2e-5642.71Show/hide
Query:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSKEWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-----------------
        + L  V  +F GRW E+ RY  ++  +V                 K W  +  +IRI DDKDV W M  +     +D+ +V D                 
Subjt:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSKEWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-----------------

Query:  -HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCP
          +E  +  + IID    E     I V   S+F  K  L+K+IY+LAL ++F+L T++SN+ SF + CKD SC WY+RAS      +W+V KF D H C 
Subjt:  -HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCP

Query:  LDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNP
        +D+VKNDH+QAT+W+V EC K   K+NDK  CRP DVINYM+  H VNISY+KAWRGRE+AL +IRG+PE SYA++ AFS  LI  NP
Subjt:  LDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNP

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.3e-5540.13Show/hide
Query:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSK----------------EWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-
        + L  V  +F+ RW E+ RY  ++  +V VP   + QEF  CI+ +                ++ N S +I I DDKDV W M  +     +D+ +V D 
Subjt:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSK----------------EWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-

Query:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD
                          +E  +  + IID    E     I +   S+F+ K  L+KAIY+LAL ++F+L T++SN+ SF + CKD +C WY+RA     
Subjt:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD

Query:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI
          ++   KF D H C +D+VKNDH+QAT+W+V EC K   K+NDK  C P +VINYM+  HDVN+SY+KAWRGRE+AL +IRG+PE SYA++ AFS  LI
Subjt:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI

Query:  EKNP
          NP
Subjt:  EKNP

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.3e-6042.43Show/hide
Query:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSK--------------EW--FNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-
        + L  V  +F+GRW E+ RY  ++  +V VP   + QEF  CI+ +               W   N S +IRI DDKDV W M  +     +D+ +V D 
Subjt:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSK--------------EW--FNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-

Query:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD
                          +E  +  + IID    E     I +   S+F+ K  L+KAIY+LAL ++F+L T++SN+ SF + CKD SC WY+RAS    
Subjt:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD

Query:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI
          +W++ KF D H C +D+VKNDH+QAT+W+V EC K   K NDK  CRP DVINYM+  H VNISY+KAWRGRE+AL +I+G+PE SYA++ AFS  LI
Subjt:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI

Query:  EKNP
          NP
Subjt:  EKNP

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]4.1e-5447.28Show/hide
Query:  NKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD------------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALR
        N S +IRI DDKDV W M  +     +D+ VV D                   +E  +  + IID    E     I +   S+F+ K  L+KAIY+LAL 
Subjt:  NKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD------------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALR

Query:  NNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNI
        ++F+L T++SN+ SF + CKD SC WY+RAS      +W+V KF+  H C +D+VKNDH+QAT+W+V EC K   K NDKV CRP DVINYM+  H VNI
Subjt:  NNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNI

Query:  SYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNP
        SY+KAW GRE+AL +IRG+PE SYA++ AFS  LI  NP
Subjt:  SYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNP

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958992.0e-5447.28Show/hide
Query:  NKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD------------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALR
        N S +IRI DDKDV W M  +     +D+ VV D                   +E  +  + IID    E     I +   S+F+ K  L+KAIY+LAL 
Subjt:  NKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD------------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALR

Query:  NNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNI
        ++F+L T++SN+ SF + CKD SC WY+RAS      +W+V KF+  H C +D+VKNDH+QAT+W+V EC K   K NDKV CRP DVINYM+  H VNI
Subjt:  NNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNI

Query:  SYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNP
        SY+KAW GRE+AL +IRG+PE SYA++ AFS  LI  NP
Subjt:  SYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNP

A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like2.1e-5641.45Show/hide
Query:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIR-----SKEWF-----------NKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-
        + L  V  +F+GRW E+ RY  ++  +V VP   + QEF  CI+     + E F           N S +IRI DDKDV W M  +     + + +V D 
Subjt:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIR-----SKEWF-----------NKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-

Query:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD
                          +E  +    IID    E     I +   S+F+ K  L+KAIY+LAL ++F+L T+ SN+ SF + CKD +C WY+ AS    
Subjt:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD

Query:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI
          +W+V KF D H C +D+VKNDH+QAT+ +V EC K   K+NDK  CRP DVINYM+  H VN+SY+KAWRGRE+AL +IRG+ E SYA++ AFS  LI
Subjt:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI

Query:  EKNP
          NP
Subjt:  EKNP

A0A5A7V1Z6 CCHC-type domain-containing protein5.6e-5742.71Show/hide
Query:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSKEWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-----------------
        + L  V  +F GRW E+ RY  ++  +V                 K W  +  +IRI DDKDV W M  +     +D+ +V D                 
Subjt:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSKEWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-----------------

Query:  -HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCP
          +E  +  + IID    E     I V   S+F  K  L+K+IY+LAL ++F+L T++SN+ SF + CKD SC WY+RAS      +W+V KF D H C 
Subjt:  -HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCP

Query:  LDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNP
        +D+VKNDH+QAT+W+V EC K   K+NDK  CRP DVINYM+  H VNISY+KAWRGRE+AL +IRG+PE SYA++ AFS  LI  NP
Subjt:  LDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNP

A0A5A7VAU3 MuDRA-like transposase6.2e-5640.13Show/hide
Query:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSK----------------EWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-
        + L  V  +F+ RW E+ RY  ++  +V VP   + QEF  CI+ +                ++ N S +I I DDKDV W M  +     +D+ +V D 
Subjt:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSK----------------EWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-

Query:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD
                          +E  +  + IID    E     I +   S+F+ K  L+KAIY+LAL ++F+L T++SN+ SF + CKD +C WY+RA     
Subjt:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD

Query:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI
          ++   KF D H C +D+VKNDH+QAT+W+V EC K   K+NDK  C P +VINYM+  HDVN+SY+KAWRGRE+AL +IRG+PE SYA++ AFS  LI
Subjt:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI

Query:  EKNP
          NP
Subjt:  EKNP

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like6.4e-6142.43Show/hide
Query:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSK--------------EW--FNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-
        + L  V  +F+GRW E+ RY  ++  +V VP   + QEF  CI+ +               W   N S +IRI DDKDV W M  +     +D+ +V D 
Subjt:  VGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSK--------------EW--FNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVAD-

Query:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD
                          +E  +  + IID    E     I +   S+F+ K  L+KAIY+LAL ++F+L T++SN+ SF + CKD SC WY+RAS    
Subjt:  -----------------HSEHHKKNHAIIDYVNVEGS---ISVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLD

Query:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI
          +W++ KF D H C +D+VKNDH+QAT+W+V EC K   K NDK  CRP DVINYM+  H VNISY+KAWRGRE+AL +I+G+PE SYA++ AFS  LI
Subjt:  RGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPRDVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLI

Query:  EKNP
          NP
Subjt:  EKNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTCCACGCCGCCAGTTGGTTTGCTGAATGTGGTGGTTCTATTCAATGGGAGGTGGGATGAAAACAATCGGTACAATGGGTTTAAGTCCAACAATGTGCCAGTACC
GGAGGGATGCACAATTCAAGAGTTCAATGAATGCATCCGGAGCAAGGAATGGTTCAACAAGTCTAATATAATCCGGATCACCGACGATAAGGATGTTATTTGGTCCATGT
CCAACATTGGCAATGGGATGACTAGCGACATATGTGTTGTGGCTGACCACTCAGAACATCACAAAAAAAATCATGCAATTATTGATTACGTCAACGTTGAAGGATCAATA
TCTGTTATGGAAGACTCGGTGTTTCAAGACAAGGATCAGTTAAGGAAAGCAATATACTTACTTGCGTTAAGAAACAATTTCCAGCTACGGACCATTAAGTCCAACCAGAA
ATCGTTTGTGGTTGGATGCAAGGACGTTTCGTGTTGTTGGTACATTCGAGCGTCTCGTCATTTGGACAGGGGTTTGTGGATGGTTCATAAGTTCGTGGACAGACATAAAT
GCCCACTGGATATTGTAAAAAATGACCACAGGCAAGCCACGGCGTGGCTTGTGGGGGAGTGTGTGAAGTCATTTTTAAAAGTGAACGACAAGGTCCAGTGTCGCCCTCGT
GATGTTATTAACTATATGAGGAGGAAACACGATGTCAACATCAGTTATGAAAAGGCATGGAGGGGGCGAGAACTTGCACTTATTGCCATCAGAGGGTCACCCGAAGCGTC
GTATGCACTAATCCCTGCTTTCTCCGCTACCCTGATCGAGAAAAACCCATGTTTGATGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACTCCACGCCGCCAGTTGGTTTGCTGAATGTGGTGGTTCTATTCAATGGGAGGTGGGATGAAAACAATCGGTACAATGGGTTTAAGTCCAACAATGTGCCAGTACC
GGAGGGATGCACAATTCAAGAGTTCAATGAATGCATCCGGAGCAAGGAATGGTTCAACAAGTCTAATATAATCCGGATCACCGACGATAAGGATGTTATTTGGTCCATGT
CCAACATTGGCAATGGGATGACTAGCGACATATGTGTTGTGGCTGACCACTCAGAACATCACAAAAAAAATCATGCAATTATTGATTACGTCAACGTTGAAGGATCAATA
TCTGTTATGGAAGACTCGGTGTTTCAAGACAAGGATCAGTTAAGGAAAGCAATATACTTACTTGCGTTAAGAAACAATTTCCAGCTACGGACCATTAAGTCCAACCAGAA
ATCGTTTGTGGTTGGATGCAAGGACGTTTCGTGTTGTTGGTACATTCGAGCGTCTCGTCATTTGGACAGGGGTTTGTGGATGGTTCATAAGTTCGTGGACAGACATAAAT
GCCCACTGGATATTGTAAAAAATGACCACAGGCAAGCCACGGCGTGGCTTGTGGGGGAGTGTGTGAAGTCATTTTTAAAAGTGAACGACAAGGTCCAGTGTCGCCCTCGT
GATGTTATTAACTATATGAGGAGGAAACACGATGTCAACATCAGTTATGAAAAGGCATGGAGGGGGCGAGAACTTGCACTTATTGCCATCAGAGGGTCACCCGAAGCGTC
GTATGCACTAATCCCTGCTTTCTCCGCTACCCTGATCGAGAAAAACCCATGTTTGATGTTTTAG
Protein sequenceShow/hide protein sequence
MHSTPPVGLLNVVVLFNGRWDENNRYNGFKSNNVPVPEGCTIQEFNECIRSKEWFNKSNIIRITDDKDVIWSMSNIGNGMTSDICVVADHSEHHKKNHAIIDYVNVEGSI
SVMEDSVFQDKDQLRKAIYLLALRNNFQLRTIKSNQKSFVVGCKDVSCCWYIRASRHLDRGLWMVHKFVDRHKCPLDIVKNDHRQATAWLVGECVKSFLKVNDKVQCRPR
DVINYMRRKHDVNISYEKAWRGRELALIAIRGSPEASYALIPAFSATLIEKNPCLMF