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Lag0014988 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014988
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr12:6552845..6553461
RNA-Seq ExpressionLag0014988
SyntenyLag0014988
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]6.5e-0431.71Show/hide
Query:  LDFCSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSNFRDVD---LDLICVGAWAIWNDRNNVIH
        +D+C V  +  E+  H L+ C+ AV+VW  L+ ++  ++ R +      + LS +R VD    +L+ +G W +W +RN+V+H
Subjt:  LDFCSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSNFRDVD---LDLICVGAWAIWNDRNNVIH

XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]1.1e-0838.46Show/hide
Query:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHL-SNFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWM
        C V  +++ETT+HALF C +A +VW  L+P           ++D  L+L  +    D DL+ VG WAIWNDRN +     IP  + R  W+
Subjt:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHL-SNFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWM

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.3e-0728.45Show/hide
Query:  MANLDFCSVGKERLETTNHALFLCHKAVKVWEALVPNENRI-LHRQMDMKDRWLHLS-NFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWMS-
        +  L  C++  +R E+  HA F C +A ++W  L P    +     +   + W  L+      DL+L  +  W IWNDRN++IH   +  +E +C W++ 
Subjt:  MANLDFCSVGKERLETTNHALFLCHKAVKVWEALVPNENRI-LHRQMDMKDRWLHLS-NFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWMS-

Query:  -----FKGQMGLVAPR
              + QM   +PR
Subjt:  -----FKGQMGLVAPR

XP_030479463.1 uncharacterized protein LOC115696714 [Cannabis sativa]2.2e-0430.56Show/hide
Query:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLS-NFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWMSFKGQMGLV
        CS+ ++  E+T HALF C  A  VW +   + N      M   D  LHLS  +   +++ I    WAIW +RN V+H     + +    + S   Q    
Subjt:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLS-NFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWMSFKGQMGLV

Query:  APRHRICT
        A +H   T
Subjt:  APRHRICT

XP_030505385.1 uncharacterized protein LOC115720373 [Cannabis sativa]9.1e-0637.08Show/hide
Query:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSN-FRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCA
        CS+ K+  E+T HALF C  A  VW +L  + N      M   D   HLS+ +   +++ +    WAIW +RNN+IH       +ARCA
Subjt:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSN-FRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCA

TrEMBL top hitse value%identityAlignment
A0A6J1CTE3 uncharacterized protein LOC1110145785.5e-0938.46Show/hide
Query:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHL-SNFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWM
        C V  +++ETT+HALF C +A +VW  L+P           ++D  L+L  +    D DL+ VG WAIWNDRN +     IP  + R  W+
Subjt:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHL-SNFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWM

A0A6J1DX30 uncharacterized protein LOC1110248746.1e-0828.45Show/hide
Query:  MANLDFCSVGKERLETTNHALFLCHKAVKVWEALVPNENRI-LHRQMDMKDRWLHLS-NFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWMS-
        +  L  C++  +R E+  HA F C +A ++W  L P    +     +   + W  L+      DL+L  +  W IWNDRN++IH   +  +E +C W++ 
Subjt:  MANLDFCSVGKERLETTNHALFLCHKAVKVWEALVPNENRI-LHRQMDMKDRWLHLS-NFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWMS-

Query:  -----FKGQMGLVAPR
              + QM   +PR
Subjt:  -----FKGQMGLVAPR

A0A803PUL2 Uncharacterized protein4.4e-0637.08Show/hide
Query:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSN-FRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCA
        CS+ K+  E+T HALF C  A  VW +L  + N      M   D   HLS+ +   +++ +    WAIW +RNN+IH       +ARCA
Subjt:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSN-FRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCA

A0A803QBU0 Uncharacterized protein5.7e-0637.66Show/hide
Query:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSN-FRDVDLDLICVGAWAIWNDRNNVIH
        CS+ ++  E+T HALF C  A  VW +L  + N  +   M   D   HLS+ + + +++ +    WAIW +RNNVIH
Subjt:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSN-FRDVDLDLICVGAWAIWNDRNNVIH

A0A803QF96 Uncharacterized protein9.8e-0637.97Show/hide
Query:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSN-FRDVDLDLICVGAWAIWNDRNNVIHNY
        CSV ++  ET  HALF C  A  VW+      +    R M   D  +HL+  +  ++++ IC   WAIWN+RN V+H Y
Subjt:  CSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSN-FRDVDLDLICVGAWAIWNDRNNVIHNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATCTAGACTTTTGCTCAGTTGGTAAGGAAAGACTAGAGACTACAAATCATGCTCTGTTTCTTTGTCACAAGGCTGTGAAAGTGTGGGAAGCTCTAGTTCCAAA
CGAGAATAGGATTCTTCATAGGCAAATGGACATGAAGGACCGATGGCTCCACCTTAGTAATTTTCGGGATGTGGATCTGGATCTGATATGTGTGGGTGCTTGGGCTATTT
GGAACGATAGAAATAATGTTATACATAATTACCCTATTCCCGCCATTGAGGCCCGATGTGCTTGGATGAGTTTCAAAGGGCAAATGGGGTTGGTGGCTCCACGTCACCGG
ATTTGTACTACTCCTTTATATGCTGAAGCGGTGGCTATGTTGGAAAGGCTTTGTTTTGCAAGACGATTGAATGTGGAACGGGTGACAGTGGGTGACGGTGATGTCAGATT
CCCTCTCCGTTCACCCTTCATGGGTGGACCAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATCTAGACTTTTGCTCAGTTGGTAAGGAAAGACTAGAGACTACAAATCATGCTCTGTTTCTTTGTCACAAGGCTGTGAAAGTGTGGGAAGCTCTAGTTCCAAA
CGAGAATAGGATTCTTCATAGGCAAATGGACATGAAGGACCGATGGCTCCACCTTAGTAATTTTCGGGATGTGGATCTGGATCTGATATGTGTGGGTGCTTGGGCTATTT
GGAACGATAGAAATAATGTTATACATAATTACCCTATTCCCGCCATTGAGGCCCGATGTGCTTGGATGAGTTTCAAAGGGCAAATGGGGTTGGTGGCTCCACGTCACCGG
ATTTGTACTACTCCTTTATATGCTGAAGCGGTGGCTATGTTGGAAAGGCTTTGTTTTGCAAGACGATTGAATGTGGAACGGGTGACAGTGGGTGACGGTGATGTCAGATT
CCCTCTCCGTTCACCCTTCATGGGTGGACCAAGGTGA
Protein sequenceShow/hide protein sequence
MANLDFCSVGKERLETTNHALFLCHKAVKVWEALVPNENRILHRQMDMKDRWLHLSNFRDVDLDLICVGAWAIWNDRNNVIHNYPIPAIEARCAWMSFKGQMGLVAPRHR
ICTTPLYAEAVAMLERLCFARRLNVERVTVGDGDVRFPLRSPFMGGPR