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Lag0014991 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014991
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr12:6557006..6557404
RNA-Seq ExpressionLag0014991
SyntenyLag0014991
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG47194.1 hypothetical protein EZV62_026488 [Acer yangbiense]9.3e-0431.31Show/hide
Query:  PVNARCEWIDDYLYDFKTTNQRIGRKAQTIQDINRLIAQGQ-EYIMHVDAAWDVVNKKSAI-VVLRDHKGQLKQAMHKGFPIFSSPLCAEAVAVIEGLK
        P N   EW  D+L +F+ ++  +  +  + + + + +A  Q  + ++ DAA +V    + I VV+R+ +GQ+  +  K F    SP+ AEA+AV+EGL+
Subjt:  PVNARCEWIDDYLYDFKTTNQRIGRKAQTIQDINRLIAQGQ-EYIMHVDAAWDVVNKKSAI-VVLRDHKGQLKQAMHKGFPIFSSPLCAEAVAVIEGLK
TrEMBL top hitse value%identityAlignment
A0A5C7GQX3 RNase H domain-containing protein4.5e-0431.31Show/hide
Query:  PVNARCEWIDDYLYDFKTTNQRIGRKAQTIQDINRLIAQGQ-EYIMHVDAAWDVVNKKSAI-VVLRDHKGQLKQAMHKGFPIFSSPLCAEAVAVIEGLK
        P N   EW  D+L +F+ ++  +  +  + + + + +A  Q  + ++ DAA +V    + I VV+R+ +GQ+  +  K F    SP+ AEA+AV+EGL+
Subjt:  PVNARCEWIDDYLYDFKTTNQRIGRKAQTIQDINRLIAQGQ-EYIMHVDAAWDVVNKKSAI-VVLRDHKGQLKQAMHKGFPIFSSPLCAEAVAVIEGLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCATTTAGCGGACTTTGTTACGGATACCGATCGAATTTGTGTTGGGATTGTAATAACACCATTCATAATCATCATGTTCCCCCTGTTAATGCTCGTTGTGAATG
GATTGATGATTATTTGTACGATTTTAAGACGACCAATCAGCGTATTGGTCGGAAGGCCCAGACGATCCAAGATATTAATAGGCTGATTGCTCAAGGCCAAGAATACATAA
TGCATGTGGATGCGGCATGGGACGTGGTGAATAAGAAAAGTGCTATTGTGGTGCTTCGTGACCATAAGGGCCAGTTGAAACAAGCAATGCATAAAGGATTTCCTATTTTT
TCGTCACCTTTGTGTGCTGAGGCTGTTGCAGTGATTGAGGGTCTTAAGCGGCCTGAGTCGGATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCATTTAGCGGACTTTGTTACGGATACCGATCGAATTTGTGTTGGGATTGTAATAACACCATTCATAATCATCATGTTCCCCCTGTTAATGCTCGTTGTGAATG
GATTGATGATTATTTGTACGATTTTAAGACGACCAATCAGCGTATTGGTCGGAAGGCCCAGACGATCCAAGATATTAATAGGCTGATTGCTCAAGGCCAAGAATACATAA
TGCATGTGGATGCGGCATGGGACGTGGTGAATAAGAAAAGTGCTATTGTGGTGCTTCGTGACCATAAGGGCCAGTTGAAACAAGCAATGCATAAAGGATTTCCTATTTTT
TCGTCACCTTTGTGTGCTGAGGCTGTTGCAGTGATTGAGGGTCTTAAGCGGCCTGAGTCGGATTGTTGA
Protein sequenceShow/hide protein sequence
MDPFSGLCYGYRSNLCWDCNNTIHNHHVPPVNARCEWIDDYLYDFKTTNQRIGRKAQTIQDINRLIAQGQEYIMHVDAAWDVVNKKSAIVVLRDHKGQLKQAMHKGFPIF
SSPLCAEAVAVIEGLKRPESDC