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Lag0014995 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0014995
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBromo domain-containing protein
Genome locationchr12:6599481..6600862
RNA-Seq ExpressionLag0014995
SyntenyLag0014995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]8.4e-2170.24Show/hide
Query:  GLHASECIWGGESELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESE
        GLH +E       ELK  ASQV++G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS V DLEH LNE E  L ESE
Subjt:  GLHASECIWGGESELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]2.3e-1876.56Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQ
        +KSYASQV+DGTLDMN+D+IFVQ+ GPEKH  VRGYGVGV  SELFGSSS V DLE RLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQ

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]2.7e-1978.12Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQ
        +KSYASQV+DGTLDMN+D+IFVQ+FGPEKH  VRGYGVGV  SELFGSSS V DLE RLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQ

XP_023893229.1 uncharacterized protein LOC112005206 [Quercus suber]2.2e-1341.13Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNV-RDLEHRLNESEQHLQESEQQRKVEVQ-----------------DQIV
        L+   +QV +G L M++D++F +VFGPE+HGRVRGYG G+TP++L GSSS++  DLE RL ESEQ   E++ +   +V+                  Q+V
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNV-RDLEHRLNESEQHLQESEQQRKVEVQ-----------------DQIV

Query:  ELENRFEDRFQTMMTDMRKQFANN
        E   RFED    +M+ M  Q A +
Subjt:  ELENRFEDRFQTMMTDMRKQFANN

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]1.5e-3367.69Show/hide
Query:  GLHASECIWGGESELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRK---------VEV
        GL  +E      S+LKSYASQV+DGTLDMNEDE FV+VFGPEKHG V GYGVGVTPSELFGSSS +RD E RLNESEQ LQE EQQRK         VEV
Subjt:  GLHASECIWGGESELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRK---------VEV

Query:  -QDQIVELENRFEDRFQTMMTDMRKQFANN
         + QI ELENRFEDRFQ MM +M K+F ++
Subjt:  -QDQIVELENRFEDRFQTMMTDMRKQFANN

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968281.3e-1978.12Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQ
        +KSYASQV+DGTLDMN+D+IFVQ+FGPEKH  VRGYGVGV  SELFGSSS V DLE RLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQ

A0A2N9H9X0 Uncharacterized protein1.3e-1452.87Show/hide
Query:  KSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFG-SSSNVRDLEHRLNESEQHLQESEQQRKVEVQDQIVELENR
        K++ +QV +G+L M EDE+FV+VFGPE HGRVRGYG GVTP+EL+G SSS++RDL+ +L ESE+  +E++     ++Q Q+ E E +
Subjt:  KSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFG-SSSNVRDLEHRLNESEQHLQESEQQRKVEVQDQIVELENR

A0A2N9HCP8 Uncharacterized protein1.7e-1448.48Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLEHRLNESEQHLQESEQQRKVEV---QDQIVELENRFEDRFQTM
        L+S  +QV +G+L M+ED++FV+VFGPE+HGRVRGYG GVT ++L+GSSS+ + DLE RL ESEQ   E+  +   +V   ++Q+++L++  E+R   M
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLEHRLNESEQHLQESEQQRKVEV---QDQIVELENRFEDRFQTM

A0A5A7U8E9 Uncharacterized protein4.1e-2170.24Show/hide
Query:  GLHASECIWGGESELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESE
        GLH +E       ELK  ASQV++G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS V DLEH LNE E  L ESE
Subjt:  GLHASECIWGGESELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X21.1e-1876.56Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQ
        +KSYASQV+DGTLDMN+D+IFVQ+ GPEKH  VRGYGVGV  SELFGSSS V DLE RLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGATCATATGTGCTGGCTTTGATTATTCATTTGTTGGATTACATGCTTCTGAATGTATTTGGGGTGGGGAGTCGGAACTCAAATCATATGCTTCTCAAGTAGTTGA
TGGTACACTTGACATGAACGAGGATGAGATTTTTGTGCAAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTGAGCTATTTG
GATCATCTTCTAATGTACGTGATCTTGAGCATCGTCTTAACGAGTCTGAACAACATCTTCAAGAATCTGAACAACAAAGAAAAGTCGAGGTACAAGATCAAATTGTCGAA
TTAGAAAATCGTTTTGAGGATAGATTTCAAACAATGATGACAGACATGCGTAAACAATTTGCTAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGATCATATGTGCTGGCTTTGATTATTCATTTGTTGGATTACATGCTTCTGAATGTATTTGGGGTGGGGAGTCGGAACTCAAATCATATGCTTCTCAAGTAGTTGA
TGGTACACTTGACATGAACGAGGATGAGATTTTTGTGCAAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTGAGCTATTTG
GATCATCTTCTAATGTACGTGATCTTGAGCATCGTCTTAACGAGTCTGAACAACATCTTCAAGAATCTGAACAACAAAGAAAAGTCGAGGTACAAGATCAAATTGTCGAA
TTAGAAAATCGTTTTGAGGATAGATTTCAAACAATGATGACAGACATGCGTAAACAATTTGCTAATAATTGA
Protein sequenceShow/hide protein sequence
MLIICAGFDYSFVGLHASECIWGGESELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVQDQIVE
LENRFEDRFQTMMTDMRKQFANN