; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015012 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015012
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:6722394..6723977
RNA-Seq ExpressionLag0015012
SyntenyLag0015012
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015383853.1 uncharacterized protein LOC107176237 [Citrus sinensis]9.2e-1625.06Show/hide
Query:  MTQFCGGDKVD-RGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQP---------------SSFL-ARVRSRSSFILKSLLLWHDC---G
        M +F    K D RGI+W  W  +   K  GG+GFR++  FN+AL+AKQ WR +Q P               + FL AR  S  S+I +S+L        G
Subjt:  MTQFCGGDKVD-RGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQP---------------SSFL-ARVRSRSSFILKSLLLWHDC---G

Query:  LRVRSDVTLVSETRVADLVTASGHWNEQLLRQ----------LSAPMSLCGR---QG-ESSMHVFWHCKFTRKILMDFEFGVLFHNVQAGFMLNLLWEGA
        +R R    + +   VADL++    W+++ +RQ          L  P+S   R   QG E++ H    CK  +K+     F   F +     ML ++ E A
Subjt:  LRVRSDVTLVSETRVADLVTASGHWNEQLLRQ----------LSAPMSLCGR---QG-ESSMHVFWHCKFTRKILMDFEFGVLFHNVQAGFMLNLLWEGA

Query:  E-------PVVGLVEWTVSY-----ISSFQQVVPISGLGLRGGIV-------------------RDEVRWSPLEFGWYKVDVDASLRKERM---------
        +        V+  + WT+ Y     +   +++ P+  +     +V                   +++  WSP     +KV+VDA++  ER          
Subjt:  E-------PVVGLVEWTVSY-----ISSFQQVVPISGLGLRGGIV-------------------RDEVRWSPLEFGWYKVDVDASLRKERM---------

Query:  -----LGWAAVR------------------GVQLAVEMRLRPLVLEMDFSRVASLLQDEGVDDSSDVGALVVDLLKEIHAAS----FVGCSFTQREGNNV
             +  AAV+                  G+ +A     + +++E D   V  L+ ++    +      V+ ++ EI + S       C  T R  N  
Subjt:  -----LGWAAVR------------------GVQLAVEMRLRPLVLEMDFSRVASLLQDEGVDDSSDVGALVVDLLKEIHAAS----FVGCSFTQREGNNV

Query:  AHRLANLALSEDDLRVWIETVLQRVEDLVFS
        AH LA LAL  ++  VW+E +   VE ++ S
Subjt:  AHRLANLALSEDDLRVWIETVLQRVEDLVFS

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]3.4e-1823.26Show/hide
Query:  GGDKVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARV----------------RSRSSFILKSLLLWHDC---GLRVR--
        G  K D+ I+WV+W SL   KC GGMGFRDLE+FN+ALLAKQCWR +  P+S L+RV                    S+I +S+L   D    GLR R  
Subjt:  GGDKVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARV----------------RSRSSFILKSLLLWHDC---GLRVR--

Query:  ----------------------SDVTLVSETRVADLVT-ASGHWNEQLLRQ-------------------------------------------------
                              S   L   +RV+ LV    G W   ++R                                                  
Subjt:  ----------------------SDVTLVSETRVADLVT-ASGHWNEQLLRQ-------------------------------------------------

Query:  LSAPMS----------------------------------------------------LCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNV-------
        + AP S                                                     CGR GE S+H+FW CKF   + ++ +FG L   +       
Subjt:  LSAPMS----------------------------------------------------LCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNV-------

Query:  ---QAGF--MLNLLW------------EGAEPV----VGLVEWTVSYISSFQQVV--PISGLGLRGGIVRDEVRWSPLEFGWYKVDVDAS-LRKERMLGW
           +A F  +  ++W            +  + V    + LVEW   Y   F++    PI+G          E+ W P + G YK++ DAS L  ++  G 
Subjt:  ---QAGF--MLNLLW------------EGAEPV----VGLVEWTVSYISSFQQVV--PISGLGLRGGIVRDEVRWSPLEFGWYKVDVDAS-LRKERMLGW

Query:  AAV----RGVQLAVEMRLRPLVLEMDFSRVASLLQ----------DEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRV
          +    RG  +A   +    +  +D +   + ++             ++D S+ G +V+        +     +F +REGN  AH LA  AL   +  +
Subjt:  AAV----RGVQLAVEMRLRPLVLEMDFSRVASLLQ----------DEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRV

Query:  WIE
        W+E
Subjt:  WIE

XP_027109195.1 uncharacterized protein LOC113729068 [Coffea arabica]4.9e-1727.07Show/hide
Query:  MTQFCGGD-KVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLV
        MT+F  GD    R I+W+SW  LCK K  GGMGFR L  FN ALL KQ WR   QPSS L +V     F      L    GL  R   T          +
Subjt:  MTQFCGGD-KVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLV

Query:  TASGHW---NEQLLRQLSAPMSLCGRQGESSMH--VFWHCKFTRKIL---MDFEFGVLFH--NVQAGFMLNLLWEGA-EPVVGLVEWTVSYISSFQQVVP
             W   N ++  Q  A   L  +   +S H  V W      K+    M+    +L++  N + G     +++G+ +  + LV +++ ++S F++   
Subjt:  TASGHW---NEQLLRQLSAPMSLCGRQGESSMH--VFWHCKFTRKIL---MDFEFGVLFH--NVQAGFMLNLLWEGA-EPVVGLVEWTVSYISSFQQVVP

Query:  ISGLGLRGGIVRDEV--RWSPLEFGWYKVDVDASL--------------------------------RKERMLGWAAVRGVQLAVEMRLRPLVLEMDFSR
                  ++  V  +W     G+ K + D ++                                  E +  +AA   V+L +++ L  ++LE D  +
Subjt:  ISGLGLRGGIVRDEV--RWSPLEFGWYKVDVDASL--------------------------------RKERMLGWAAVRGVQLAVEMRLRPLVLEMDFSR

Query:  VASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVW
        V  +LQ     D+S  G LV D+L++I + +    S+  R+ NNVAHR+A  A S  +  +W
Subjt:  VASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVW

XP_027158404.1 uncharacterized protein LOC113760026 [Coffea eugenioides]4.9e-1727.07Show/hide
Query:  MTQFCGGD-KVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLV
        MT+F  GD    R I+W+SW  LCK K  GGMGFR L  FN ALL KQ WR   QPSS L +V     F      L    GL  R   T          +
Subjt:  MTQFCGGD-KVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLV

Query:  TASGHW---NEQLLRQLSAPMSLCGRQGESSMH--VFWHCKFTRKIL---MDFEFGVLFH--NVQAGFMLNLLWEGA-EPVVGLVEWTVSYISSFQQVVP
             W   N ++  Q  A   L  +   +S H  V W      K+    M+    +L++  N + G     +++G+ +  + LV +++ ++S F++   
Subjt:  TASGHW---NEQLLRQLSAPMSLCGRQGESSMH--VFWHCKFTRKIL---MDFEFGVLFH--NVQAGFMLNLLWEGA-EPVVGLVEWTVSYISSFQQVVP

Query:  ISGLGLRGGIVRDEV--RWSPLEFGWYKVDVDASL--------------------------------RKERMLGWAAVRGVQLAVEMRLRPLVLEMDFSR
                  ++  V  +W     G+ K + D ++                                  E +  +AA   V+L +++ L  ++LE D  +
Subjt:  ISGLGLRGGIVRDEV--RWSPLEFGWYKVDVDASL--------------------------------RKERMLGWAAVRGVQLAVEMRLRPLVLEMDFSR

Query:  VASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVW
        V  +LQ     D+S  G LV D+L++I + +    S+  R+ NNVAHR+A  A S  +  +W
Subjt:  VASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVW

XP_042964706.1 uncharacterized protein LOC122298928 [Carya illinoinensis]1.9e-1626.43Show/hide
Query:  DRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLL--------------LWHDCGL-------RVRSDVT-
        D+ I+W SW  +   K  GG+GFR+LE FN+A+LAKQ WR +  P+S +ARV     F  KS+L              L+   GL       RV    T 
Subjt:  DRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLL--------------LWHDCGL-------RVRSDVT-

Query:  ----------------------LVSETRVADLVTAS-GHWNEQLLRQL----------SAPMSLCGRQGESSMHVFWHCK----FTRKILMDFEFGVLFH
                              L +E  V  L+    G WNE+L+ ++          + P+S  G + +    + W C     F+ K     E+  +  
Subjt:  ----------------------LVSETRVADLVTAS-GHWNEQLLRQL----------SAPMSLCGRQGESSMHVFWHCK----FTRKILMDFEFGVLFH

Query:  NVQAGFMLNLLWEGAEPVVGLVEWTVSYISSFQQVVPISGLGLRGGIVRDEVRWSPLEFGWYKVDVDASLRKERMLGWAAVRGVQLAVEMRLRPLVLEMD
               +NL   G + +     W +  +  F+ V   +     G + R  +RW  L+    KV+ DA+L       +A  R +   +E+ L+ ++LE D
Subjt:  NVQAGFMLNLLWEGAEPVVGLVEWTVSYISSFQQVVPISGLGLRGGIVRDEVRWSPLEFGWYKVDVDASLRKERMLGWAAVRGVQLAVEMRLRPLVLEMD

Query:  FSRVASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVWIE
         S+V     +  VD  +D   ++ D  + +        +F  RE NNVAH L  +AL+     VWI+
Subjt:  FSRVASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVWIE

TrEMBL top hitse value%identityAlignment
A0A2N9IPQ7 Uncharacterized protein4.0e-1727.61Show/hide
Query:  QFCGGDK-VDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLVTA
        QF  G K  +R I WV+WK +C  K YGGMGFRDLE FN +LLAKQ WR  Q  SS  A    + S I    ++ H    RV +    +S      L   
Subjt:  QFCGGDK-VDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLVTA

Query:  SGHWNEQLLRQLSAPMSLCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNVQAGFMLNLLWEGAEPVVGLVEWTVS-----------YISSFQQVVPIS
        S       +  LSA   +  ++     +  W  +  R+  M  E             L L WE     V L+ W V            YI  +       
Subjt:  SGHWNEQLLRQLSAPMSLCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNVQAGFMLNLLWEGAEPVVGLVEWTVS-----------YISSFQQVVPIS

Query:  GLGLRGGIVRDEVRWSPLEFGWYKVDVDASLRKE---------------RMLG-----------------WAAVRGVQLAVEMRLRPLVLEMDFSRVASL
        G   + G  R  + W P E GW KV++D ++ ++                 LG                  AA R ++ A E+    L+ E D  +V   
Subjt:  GLGLRGGIVRDEVRWSPLEFGWYKVDVDASLRKE---------------RMLG-----------------WAAVRGVQLAVEMRLRPLVLEMDFSRVASL

Query:  LQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVWIETVLQRVEDLVFSD
        L     D S  +G L +   + +            REGN VAH LA  A      +VW+E+    +E L+  D
Subjt:  LQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVWIETVLQRVEDLVFSD

A0A6J1DAR4 uncharacterized protein LOC1110189541.6e-1823.26Show/hide
Query:  GGDKVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARV----------------RSRSSFILKSLLLWHDC---GLRVR--
        G  K D+ I+WV+W SL   KC GGMGFRDLE+FN+ALLAKQCWR +  P+S L+RV                    S+I +S+L   D    GLR R  
Subjt:  GGDKVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARV----------------RSRSSFILKSLLLWHDC---GLRVR--

Query:  ----------------------SDVTLVSETRVADLVT-ASGHWNEQLLRQ-------------------------------------------------
                              S   L   +RV+ LV    G W   ++R                                                  
Subjt:  ----------------------SDVTLVSETRVADLVT-ASGHWNEQLLRQ-------------------------------------------------

Query:  LSAPMS----------------------------------------------------LCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNV-------
        + AP S                                                     CGR GE S+H+FW CKF   + ++ +FG L   +       
Subjt:  LSAPMS----------------------------------------------------LCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNV-------

Query:  ---QAGF--MLNLLW------------EGAEPV----VGLVEWTVSYISSFQQVV--PISGLGLRGGIVRDEVRWSPLEFGWYKVDVDAS-LRKERMLGW
           +A F  +  ++W            +  + V    + LVEW   Y   F++    PI+G          E+ W P + G YK++ DAS L  ++  G 
Subjt:  ---QAGF--MLNLLW------------EGAEPV----VGLVEWTVSYISSFQQVV--PISGLGLRGGIVRDEVRWSPLEFGWYKVDVDAS-LRKERMLGW

Query:  AAV----RGVQLAVEMRLRPLVLEMDFSRVASLLQ----------DEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRV
          +    RG  +A   +    +  +D +   + ++             ++D S+ G +V+        +     +F +REGN  AH LA  AL   +  +
Subjt:  AAV----RGVQLAVEMRLRPLVLEMDFSRVASLLQ----------DEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRV

Query:  WIE
        W+E
Subjt:  WIE

A0A6P6W2N9 uncharacterized protein LOC1137290682.4e-1727.07Show/hide
Query:  MTQFCGGD-KVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLV
        MT+F  GD    R I+W+SW  LCK K  GGMGFR L  FN ALL KQ WR   QPSS L +V     F      L    GL  R   T          +
Subjt:  MTQFCGGD-KVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLV

Query:  TASGHW---NEQLLRQLSAPMSLCGRQGESSMH--VFWHCKFTRKIL---MDFEFGVLFH--NVQAGFMLNLLWEGA-EPVVGLVEWTVSYISSFQQVVP
             W   N ++  Q  A   L  +   +S H  V W      K+    M+    +L++  N + G     +++G+ +  + LV +++ ++S F++   
Subjt:  TASGHW---NEQLLRQLSAPMSLCGRQGESSMH--VFWHCKFTRKIL---MDFEFGVLFH--NVQAGFMLNLLWEGA-EPVVGLVEWTVSYISSFQQVVP

Query:  ISGLGLRGGIVRDEV--RWSPLEFGWYKVDVDASL--------------------------------RKERMLGWAAVRGVQLAVEMRLRPLVLEMDFSR
                  ++  V  +W     G+ K + D ++                                  E +  +AA   V+L +++ L  ++LE D  +
Subjt:  ISGLGLRGGIVRDEV--RWSPLEFGWYKVDVDASL--------------------------------RKERMLGWAAVRGVQLAVEMRLRPLVLEMDFSR

Query:  VASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVW
        V  +LQ     D+S  G LV D+L++I + +    S+  R+ NNVAHR+A  A S  +  +W
Subjt:  VASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVW

A0A803MR95 Uncharacterized protein1.8e-1725.2Show/hide
Query:  MTQFCGGDKV-DRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCG------LRVRSDVTLVSET
        + QFC   K  +R I+ ++WK LCK K  GG+GFRD ++FN ALL KQ WR + +P+S L RV     + L S  +  D G       RV S+   + + 
Subjt:  MTQFCGGDKV-DRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCG------LRVRSDVTLVSET

Query:  RVADLVTASGHWNEQLLRQLSAPMSLCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNVQAGFMLNLLWEGAEPVVGLVEWTVSYISSFQQVVPISGLG
        R+  +  ++   ++ L   L        +  + + +V  H           E   + H+++   +   +WE +   + L+         F +   + G+ 
Subjt:  RVADLVTASGHWNEQLLRQLSAPMSLCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNVQAGFMLNLLWEGAEPVVGLVEWTVSYISSFQQVVPISGLG

Query:  LRGGIVRDEVRWSPLEFGWYKVDVDASLRKERMLGWAAVR-------------------------------GVQLAVEMRLRPLVLEMDFSRVASLLQDE
        L     +   +W+  E  W+KV+VDA    E  +G   V                                G+Q+A +   + +V+E D   V   L+  
Subjt:  LRGGIVRDEVRWSPLEFGWYKVDVDASLRKERMLGWAAVR-------------------------------GVQLAVEMRLRPLVLEMDFSRVASLLQDE

Query:  GVDDSSDVGALVVDLLKEIHAASF--VGCSFTQREGNNVAHRLANLALSEDDLRVWIETVLQRVEDLVFSDFI
         V  S+    L++D ++ +  +SF  V  SF +R GN VAH LA+    E   RVW++ ++  V +    D +
Subjt:  GVDDSSDVGALVVDLLKEIHAASF--VGCSFTQREGNNVAHRLANLALSEDDLRVWIETVLQRVEDLVFSDFI

A0A803QHJ7 Uncharacterized protein1.8e-1724.04Show/hide
Query:  GGDKVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILK-----------------SLLLWH---------DC
        G  + D+ I+W  W+ LCK K  GGMGF DL +FNQALLAKQ WR ++ P++   RV   S+   K                   +LWH           
Subjt:  GGDKVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILK-----------------SLLLWH---------DC

Query:  GLRVRSDVTLVSETRVADLVTASGHWNEQLLRQLSAPMSL----------------------------CGR----QGESSMHVFWHCKFTRKILMDFEFG
        G R+  +  L +E + +D   A   W +  L +L  P  +                            C R      E   H FW CK ++ +     + 
Subjt:  GLRVRSDVTLVSETRVADLVTASGHWNEQLLRQLSAPMSL----------------------------CGR----QGESSMHVFWHCKFTRKILMDFEFG

Query:  VLFHNVQAGFMLNLLWEGAEPVVGLVEWTVSYISSFQQVVPISGLGLRGGIVRDEVRWSPLEFGWYKVDVDASLRKE-----------------------
             +  GF+        +P   +VEW    +  FQ      G   +  + R+E  W     G  K++VD  ++K                        
Subjt:  VLFHNVQAGFMLNLLWEGAEPVVGLVEWTVSYISSFQQVVPISGLGLRGGIVRDEVRWSPLEFGWYKVDVDASLRKE-----------------------

Query:  ---------RMLGWAAVRGVQLAVEMRLRPLVLEMDFSRVASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRV
                 ++   A ++G+Q  ++  +    +E D      L+Q +  D   DV  L+  +   +   S +G SF  RE N VAH LAN AL      +
Subjt:  ---------RMLGWAAVRGVQLAVEMRLRPLVLEMDFSRVASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRV

Query:  WIETVLQRVEDLVFSD
        WI  +L      +  D
Subjt:  WIETVLQRVEDLVFSD

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003106.6e-0958.93Show/hide
Query:  RGIYWVSWKSLCKLK-CYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLAR-VRSR
        R I WV+W+ LCK K   GG+GFRDL  FNQALLAKQ +R + QP + L+R +RSR
Subjt:  RGIYWVSWKSLCKLK-CYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLAR-VRSR

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.4e-0938.46Show/hide
Query:  RGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARV----------------RSRSSFILKSL
        +G++W +W  L   K  GG+GF+D+E FN ALL KQ WR + +P S +A+V                 SR SF+ KS+
Subjt:  RGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARV----------------RSRSSFILKSL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.7e-1058.93Show/hide
Query:  RGIYWVSWKSLCKLK-CYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLAR-VRSR
        R I WV+W+ LCK K   GG+GFRDL  FNQALLAKQ +R + QP + L+R +RSR
Subjt:  RGIYWVSWKSLCKLK-CYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLAR-VRSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAGTTCTGTGGAGGGGATAAGGTGGATCGAGGAATTTATTGGGTGAGTTGGAAGTCTTTGTGTAAGCTTAAATGTTATGGTGGTATGGGATTCAGAGACCTCGA
GATTTTTAACCAAGCTTTGTTGGCAAAGCAGTGTTGGAGATTTGTCCAACAACCATCCTCCTTTCTGGCGCGTGTGAGATCGAGATCGTCCTTTATCTTGAAGAGTTTGT
TATTGTGGCACGATTGTGGCCTTAGAGTGCGTTCAGATGTGACCTTGGTGTCAGAAACTCGGGTAGCTGATCTGGTGACTGCGTCTGGTCACTGGAATGAACAGCTCCTT
CGACAGCTTTCAGCCCCCATGAGCCTTTGTGGTCGGCAGGGGGAATCTAGTATGCATGTGTTTTGGCACTGTAAGTTTACTAGGAAGATTTTGATGGATTTTGAGTTTGG
GGTCTTGTTTCATAACGTGCAAGCAGGATTTATGTTGAATCTCCTTTGGGAGGGGGCCGAGCCGGTGGTAGGACTTGTGGAGTGGACGGTGAGTTATATCTCATCGTTTC
AGCAGGTTGTTCCGATAAGTGGTTTAGGCTTGCGTGGTGGGATTGTAAGGGATGAGGTGAGATGGAGCCCCCTGGAGTTTGGTTGGTATAAGGTGGATGTGGATGCATCT
CTTCGGAAGGAGCGGATGCTTGGTTGGGCTGCTGTGAGGGGCGTGCAGCTTGCGGTGGAGATGAGGCTCAGACCATTGGTGTTGGAGATGGACTTCAGTCGCGTTGCTAG
TTTGTTGCAGGATGAGGGAGTTGATGACTCTTCCGATGTAGGTGCGCTGGTGGTGGACTTACTTAAAGAGATCCATGCTGCTTCTTTTGTTGGTTGTTCTTTTACTCAAA
GGGAGGGGAATAATGTTGCGCACAGGCTGGCAAATTTGGCCTTGAGTGAAGATGACTTACGGGTTTGGATTGAGACTGTCCTTCAACGTGTGGAAGATTTGGTTTTCTCT
GATTTCATACATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACAGTTCTGTGGAGGGGATAAGGTGGATCGAGGAATTTATTGGGTGAGTTGGAAGTCTTTGTGTAAGCTTAAATGTTATGGTGGTATGGGATTCAGAGACCTCGA
GATTTTTAACCAAGCTTTGTTGGCAAAGCAGTGTTGGAGATTTGTCCAACAACCATCCTCCTTTCTGGCGCGTGTGAGATCGAGATCGTCCTTTATCTTGAAGAGTTTGT
TATTGTGGCACGATTGTGGCCTTAGAGTGCGTTCAGATGTGACCTTGGTGTCAGAAACTCGGGTAGCTGATCTGGTGACTGCGTCTGGTCACTGGAATGAACAGCTCCTT
CGACAGCTTTCAGCCCCCATGAGCCTTTGTGGTCGGCAGGGGGAATCTAGTATGCATGTGTTTTGGCACTGTAAGTTTACTAGGAAGATTTTGATGGATTTTGAGTTTGG
GGTCTTGTTTCATAACGTGCAAGCAGGATTTATGTTGAATCTCCTTTGGGAGGGGGCCGAGCCGGTGGTAGGACTTGTGGAGTGGACGGTGAGTTATATCTCATCGTTTC
AGCAGGTTGTTCCGATAAGTGGTTTAGGCTTGCGTGGTGGGATTGTAAGGGATGAGGTGAGATGGAGCCCCCTGGAGTTTGGTTGGTATAAGGTGGATGTGGATGCATCT
CTTCGGAAGGAGCGGATGCTTGGTTGGGCTGCTGTGAGGGGCGTGCAGCTTGCGGTGGAGATGAGGCTCAGACCATTGGTGTTGGAGATGGACTTCAGTCGCGTTGCTAG
TTTGTTGCAGGATGAGGGAGTTGATGACTCTTCCGATGTAGGTGCGCTGGTGGTGGACTTACTTAAAGAGATCCATGCTGCTTCTTTTGTTGGTTGTTCTTTTACTCAAA
GGGAGGGGAATAATGTTGCGCACAGGCTGGCAAATTTGGCCTTGAGTGAAGATGACTTACGGGTTTGGATTGAGACTGTCCTTCAACGTGTGGAAGATTTGGTTTTCTCT
GATTTCATACATTTGTAA
Protein sequenceShow/hide protein sequence
MTQFCGGDKVDRGIYWVSWKSLCKLKCYGGMGFRDLEIFNQALLAKQCWRFVQQPSSFLARVRSRSSFILKSLLLWHDCGLRVRSDVTLVSETRVADLVTASGHWNEQLL
RQLSAPMSLCGRQGESSMHVFWHCKFTRKILMDFEFGVLFHNVQAGFMLNLLWEGAEPVVGLVEWTVSYISSFQQVVPISGLGLRGGIVRDEVRWSPLEFGWYKVDVDAS
LRKERMLGWAAVRGVQLAVEMRLRPLVLEMDFSRVASLLQDEGVDDSSDVGALVVDLLKEIHAASFVGCSFTQREGNNVAHRLANLALSEDDLRVWIETVLQRVEDLVFS
DFIHL