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Lag0015150 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015150
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr12:8151405..8152517
RNA-Seq ExpressionLag0015150
SyntenyLag0015150
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY85402.1 hypothetical protein Acr_04g0001400 [Actinidia rufa]2.6e-1642.24Show/hide
Query:  PPTSPSSLPFFPQYNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYLIWQKFNRTLM
        PP + + LP     NP+     ++  P+   P++  PL+VKL D NY++WK QLLN +IA  +E F++G+   PP+FLD  Q Q +P++  WQ++NR +M
Subjt:  PPTSPSSLPFFPQYNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYLIWQKFNRTLM

Query:  SWIYSSLTEDKLGEII
        SWIY+S+ E  LG+I+
Subjt:  SWIYSSLTEDKLGEII

GFZ12741.1 UBX domain-containing protein [Actinidia rufa]1.5e-1641.27Show/hide
Query:  SSSVPAGFQYPPTSPSSLPFFPQYNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYL
        SSS P     P ++P      P+ NP +        P    P++  PL+VKL D NY++WK QLLN +IA  +E F++G+   PP+FLD  Q Q +P++ 
Subjt:  SSSVPAGFQYPPTSPSSLPFFPQYNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYL

Query:  IWQKFNRTLMSWIYSSLTEDKLGEII
         WQ++NR +MSWIY+S+ E  LG+I+
Subjt:  IWQKFNRTLMSWIYSSLTEDKLGEII

PON47862.1 hypothetical protein TorRG33x02_321990 [Trema orientale]9.0e-1742.64Show/hide
Query:  SSVPAGFQYPPTSPSSLPFFPQYNPSM-PFFPSAQPPSSP---FPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSP
        +SV +    P T   ++   P   P++      AQPP  P    P++  P ++KL   NYL+WKNQLLN IIA  +E FI+G+ P PP+F D A+  V+ 
Subjt:  SSVPAGFQYPPTSPSSLPFFPQYNPSM-PFFPSAQPPSSP---FPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSP

Query:  QYLIWQKFNRTLMSWIYSSLTEDKLGEII
        +Y+ WQ+FNR +MSWIY+SLT+  +G+I+
Subjt:  QYLIWQKFNRTLMSWIYSSLTEDKLGEII

RVW56403.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]6.9e-1748.67Show/hide
Query:  SSLPFFPQ-YNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIY
        ++L   PQ  NP+  F P+     + +P+L+ PL++KL +TN  LWKNQLLN IIA  +E FI G TP P KFLD+AQ QV+P ++ W++ N  +MSWIY
Subjt:  SSLPFFPQ-YNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIY

Query:  SSLTEDKLGEIIE
         SLT   +G I+E
Subjt:  SSLTEDKLGEIIE

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]5.4e-2252.78Show/hide
Query:  QYNPSMPFFPSAQPP----SSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIYSSLT
        Q+ P  P F  AQPP    ++PFPTL  PL+VKL+D N+LLWKNQLLN +IA  +  +++GT   PP+FLD+ Q Q +P Y  W+++NR LM WIYSSL+
Subjt:  QYNPSMPFFPSAQPP----SSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIYSSLT

Query:  EDKLGEII
        E+K+GE++
Subjt:  EDKLGEII

TrEMBL top hitse value%identityAlignment
A0A2P5BGF8 Uncharacterized protein4.3e-1742.64Show/hide
Query:  SSVPAGFQYPPTSPSSLPFFPQYNPSM-PFFPSAQPPSSP---FPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSP
        +SV +    P T   ++   P   P++      AQPP  P    P++  P ++KL   NYL+WKNQLLN IIA  +E FI+G+ P PP+F D A+  V+ 
Subjt:  SSVPAGFQYPPTSPSSLPFFPQYNPSM-PFFPSAQPPSSP---FPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSP

Query:  QYLIWQKFNRTLMSWIYSSLTEDKLGEII
        +Y+ WQ+FNR +MSWIY+SLT+  +G+I+
Subjt:  QYLIWQKFNRTLMSWIYSSLTEDKLGEII

A0A438F8X3 Retrovirus-related Pol polyprotein from transposon RE13.3e-1748.67Show/hide
Query:  SSLPFFPQ-YNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIY
        ++L   PQ  NP+  F P+     + +P+L+ PL++KL +TN  LWKNQLLN IIA  +E FI G TP P KFLD+AQ QV+P ++ W++ N  +MSWIY
Subjt:  SSLPFFPQ-YNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIY

Query:  SSLTEDKLGEIIE
         SLT   +G I+E
Subjt:  SSLTEDKLGEIIE

A0A438JBM8 Uncharacterized protein1.3e-1648.42Show/hide
Query:  PSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIYSSLTEDKLGEII
        P    PS  F ++  PL VKL + NYL+WKNQLLN IIA +++ FI G+   PP+FLD  Q  ++ +YL+WQ++NR LMSW+Y+ L ED + +I+
Subjt:  PSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIYSSLTEDKLGEII

A0A6J1DQX7 uncharacterized protein LOC1110223152.6e-2252.78Show/hide
Query:  QYNPSMPFFPSAQPP----SSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIYSSLT
        Q+ P  P F  AQPP    ++PFPTL  PL+VKL+D N+LLWKNQLLN +IA  +  +++GT   PP+FLD+ Q Q +P Y  W+++NR LM WIYSSL+
Subjt:  QYNPSMPFFPSAQPP----SSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIYSSLT

Query:  EDKLGEII
        E+K+GE++
Subjt:  EDKLGEII

A0A7J0GPN0 UBX domain-containing protein7.4e-1741.27Show/hide
Query:  SSSVPAGFQYPPTSPSSLPFFPQYNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYL
        SSS P     P ++P      P+ NP +        P    P++  PL+VKL D NY++WK QLLN +IA  +E F++G+   PP+FLD  Q Q +P++ 
Subjt:  SSSVPAGFQYPPTSPSSLPFFPQYNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDNAQTQVSPQYL

Query:  IWQKFNRTLMSWIYSSLTEDKLGEII
         WQ++NR +MSWIY+S+ E  LG+I+
Subjt:  IWQKFNRTLMSWIYSSLTEDKLGEII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGGAGCCTAGAATTTTGCACGTCATTGGTCGTGGGATCCAAGGGTCATGAGACAACCGAATATAATGACCATCACCAATCTGCTCCCTCGGGCCCGCCTTCAGG
AGATCCAAGCCCCCAACAAAGCCCCTCCAAAAATAAAAAGACCGAAGACGCGTTTCCGCCTCCTGTAATTCTGACGAAGGGTGTTAGCATAAGCACCTCAACCTTTGATG
ACACTCGAGTGCCCAATCTTCCCCCTGTTTCTTCGTCTACCTCCACCGTATCAACGCCGATTACCACTCCCCTTTCTTCTCAGAGAGCTCAACCTAATATCACATCATCT
GGCACTCCGACGCGTCCCTTGAATCCAAATCTTCCCCCCTTTCAGTCGACCTTTGCGTCTCAGCCATCTATCCCTCAATATTATCCTTTCAGCTCCTCTGTTCCAGCCGG
TTTTCAGTATCCCCCTACTTCACCATCCTCCTTACCCTTTTTCCCTCAGTACAATCCCTCTATGCCCTTTTTTCCTTCCGCTCAGCCTCCTTCTTCCCCATTTCCAACCC
TAACGCCTCCTCTCAGTGTTAAGCTCAGTGACACAAACTACTTATTGTGGAAAAACCAGCTGCTCAATCATATAATAGCTTTCGATATGGAAAGCTTCATCAACGGCACT
CCAGCTCCGCCGAAATTTCTGGACAACGCTCAAACGCAGGTAAGTCCTCAATATCTCATCTGGCAGAAGTTTAATCGAACACTAATGAGTTGGATTTATTCTTCCTTGAC
TGAAGATAAGTTAGGAGAAATAATTGAAACCAGGGTTGGTAATACTTTCCTTAAAGGACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGGAGCCTAGAATTTTGCACGTCATTGGTCGTGGGATCCAAGGGTCATGAGACAACCGAATATAATGACCATCACCAATCTGCTCCCTCGGGCCCGCCTTCAGG
AGATCCAAGCCCCCAACAAAGCCCCTCCAAAAATAAAAAGACCGAAGACGCGTTTCCGCCTCCTGTAATTCTGACGAAGGGTGTTAGCATAAGCACCTCAACCTTTGATG
ACACTCGAGTGCCCAATCTTCCCCCTGTTTCTTCGTCTACCTCCACCGTATCAACGCCGATTACCACTCCCCTTTCTTCTCAGAGAGCTCAACCTAATATCACATCATCT
GGCACTCCGACGCGTCCCTTGAATCCAAATCTTCCCCCCTTTCAGTCGACCTTTGCGTCTCAGCCATCTATCCCTCAATATTATCCTTTCAGCTCCTCTGTTCCAGCCGG
TTTTCAGTATCCCCCTACTTCACCATCCTCCTTACCCTTTTTCCCTCAGTACAATCCCTCTATGCCCTTTTTTCCTTCCGCTCAGCCTCCTTCTTCCCCATTTCCAACCC
TAACGCCTCCTCTCAGTGTTAAGCTCAGTGACACAAACTACTTATTGTGGAAAAACCAGCTGCTCAATCATATAATAGCTTTCGATATGGAAAGCTTCATCAACGGCACT
CCAGCTCCGCCGAAATTTCTGGACAACGCTCAAACGCAGGTAAGTCCTCAATATCTCATCTGGCAGAAGTTTAATCGAACACTAATGAGTTGGATTTATTCTTCCTTGAC
TGAAGATAAGTTAGGAGAAATAATTGAAACCAGGGTTGGTAATACTTTCCTTAAAGGACTTTAG
Protein sequenceShow/hide protein sequence
MPWSLEFCTSLVVGSKGHETTEYNDHHQSAPSGPPSGDPSPQQSPSKNKKTEDAFPPPVILTKGVSISTSTFDDTRVPNLPPVSSSTSTVSTPITTPLSSQRAQPNITSS
GTPTRPLNPNLPPFQSTFASQPSIPQYYPFSSSVPAGFQYPPTSPSSLPFFPQYNPSMPFFPSAQPPSSPFPTLTPPLSVKLSDTNYLLWKNQLLNHIIAFDMESFINGT
PAPPKFLDNAQTQVSPQYLIWQKFNRTLMSWIYSSLTEDKLGEIIETRVGNTFLKGL