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Lag0015151 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015151
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:8153664..8154005
RNA-Seq ExpressionLag0015151
SyntenyLag0015151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66044.1 hypothetical protein [Beta vulgaris subsp. vulgaris]4.3e-1046.84Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQA
        V FSK V +  +  LS+I+QM  VE    YLG+PS   +S++  F  ++DR+W  LQGWK    S  GKEI +KSV+QA
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQA

XP_019105429.1 PREDICTED: uncharacterized protein LOC109135179 [Beta vulgaris subsp. vulgaris]2.5e-1049.37Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQA
        V FSK V VD R  LS ++ M  VE    YLG+PS   + K+  F  ++DRVW  LQGWK  F S  GKEI +K V+QA
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQA

XP_021761446.1 uncharacterized protein LOC110726302 [Chenopodium quinoa]8.7e-1148.1Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQA
        V FSK VH+ +R  LSSI+ M MV++   YLGLP+   +SK   F  + DR+W  +QGWK  F S  GKE+ +KS++QA
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQA

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]3.3e-1040.23Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC
        +CF +NV    +  L++++ + +V++ G YLGLPS   ++K + F+ I +RVW  L+GWK  FFS   KE+ IK++VQA      SC
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC

XP_030930993.1 uncharacterized protein LOC115956857 [Quercus lobata]1.6e-0942.05Show/hide
Query:  MVCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC
        ++ FSK VH DT+  LS+ +Q+  V+    YLGLP+   ++K++    I +RVW  LQGWK    S  G+EI +K+VVQA      SC
Subjt:  MVCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC

TrEMBL top hitse value%identityAlignment
A0A803NGM9 Uncharacterized protein4.7e-1042.53Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC
        VCF +NV    R+ L++ + +  VEH G YLGLPS   ++K +    I ++VW  ++GWK   FS  GKE+ IK+VVQA      SC
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC

A0A803PV25 Uncharacterized protein2.7e-1039.08Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC
        +CF ++V    R +L++ + + +V++ G YLGLPS   ++K + F+  +++VW  L+GWK  FFS  GKE+ IK++VQA      SC
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC

A0A803PWX1 Uncharacterized protein1.5e-1141.38Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC
        +CF + V +  R +L++I+ + +V++ G YLGLPS   ++K + F+ I ++VW  L+GWK  FFS  GKE+ IK+V+QA      SC
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC

A0A803QE56 Uncharacterized protein3.6e-1041.38Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC
        VCF + V  D +  ++ ++ M +V++ G YLGLPS   ++K + F  I +RVW  L+GWK   FS  GKE+ IK++VQA      SC
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSC

F4NCJ0 Reverse transcriptase domain-containing protein2.1e-1046.84Show/hide
Query:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQA
        V FSK V +  +  LS+I+QM  VE    YLG+PS   +S++  F  ++DR+W  LQGWK    S  GKEI +KSV+QA
Subjt:  VCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGTTTTTCGAAGAATGTGCATGTTGATACAAGGCGGTACCTCAGTTCTATTGTGCAGATGGTTATGGTGGAGCATTTGGGTTCTTACCTAGGCCTACCCTCGTC
GTTCCAACAAAGTAAGAGCAAGGATTTTAAGGGTATTCTAGACAGAGTTTGGGGTTCATTACAGGGTTGGAAGCCATGTTTTTTCTCTGGCGGTGGGAAAGAGATCCCAA
TCAAGAGCGTCGTCCAAGCCAGTGGCGGATCCAGAACTTCATGTCAGGGGGGCTACATAGAAATAAAGGAAAATAACAATTTTAACCTTAAAATTGGTAAAGTGTTTCGG
TTTTTACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTGTTTTTCGAAGAATGTGCATGTTGATACAAGGCGGTACCTCAGTTCTATTGTGCAGATGGTTATGGTGGAGCATTTGGGTTCTTACCTAGGCCTACCCTCGTC
GTTCCAACAAAGTAAGAGCAAGGATTTTAAGGGTATTCTAGACAGAGTTTGGGGTTCATTACAGGGTTGGAAGCCATGTTTTTTCTCTGGCGGTGGGAAAGAGATCCCAA
TCAAGAGCGTCGTCCAAGCCAGTGGCGGATCCAGAACTTCATGTCAGGGGGGCTACATAGAAATAAAGGAAAATAACAATTTTAACCTTAAAATTGGTAAAGTGTTTCGG
TTTTTACCTTAA
Protein sequenceShow/hide protein sequence
MVCFSKNVHVDTRRYLSSIVQMVMVEHLGSYLGLPSSFQQSKSKDFKGILDRVWGSLQGWKPCFFSGGGKEIPIKSVVQASGGSRTSCQGGYIEIKENNNFNLKIGKVFR
FLP