; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015155 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015155
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:8183161..8188707
RNA-Seq ExpressionLag0015155
SyntenyLag0015155
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030923338.1 uncharacterized protein LOC115950248 [Quercus lobata]1.8e-2536.07Show/hide
Query:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS
        + FV  F+G +  ++   + LT++QG  ESL+ +I +F  E L V+  DD + L A    I++ L              E VL  I+D   LK PEK+  
Subjt:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS

Query:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN
        DP++RN+NKYC FH DH H T EC  L+ +IE LIR+  LK FVG  R+   L     +    P  EIR I+G       G   G    S+  Y+ A++N
Subjt:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN

Query:  ID------RKRLQRDPGIS
        +       R RL  +P IS
Subjt:  ID------RKRLQRDPGIS

XP_030923529.1 uncharacterized protein LOC115950474 [Quercus lobata]1.8e-2536.07Show/hide
Query:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS
        + FV  F+G +  ++   + LT++QG  ESL+ +I +F  E L V+  DD + L A    I++ L              E VL  I+D   LK PEK+  
Subjt:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS

Query:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN
        DP++RN+NKYC FH DH H T EC  L+ +IE LIR+  LK FVG  R+   L     +    P  EIR I+G       G   G    S+  Y+ A++N
Subjt:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN

Query:  ID------RKRLQRDPGIS
        +       R RL  +P IS
Subjt:  ID------RKRLQRDPGIS

XP_030924206.1 uncharacterized protein LOC115951026 [Quercus lobata]2.3e-2535.62Show/hide
Query:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS
        + FV  F+G +  ++   + LT++QG  ESL+ +I +F  E L V+  DD + L A    I++ L              E VL  I+D   LK PEK+  
Subjt:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS

Query:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN
        DP++RN+NKYC FH DH H T EC  L+ +IE LIR+  LK FVG  R+   L     +    P  EIR I+G       G   G+   S+  Y+  ++N
Subjt:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN

Query:  ID------RKRLQRDPGIS
        +       R RL  +P IS
Subjt:  ID------RKRLQRDPGIS

XP_030936482.1 uncharacterized protein LOC115961685 [Quercus lobata]1.0e-2536.07Show/hide
Query:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS
        + FV  F+G +  ++   + LT++QG  ESL+ +I +F  E L V+  DD + L A    I++ L              E VL  I+D   LK PEK+  
Subjt:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS

Query:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN
        DP++RN+NKYC FH DH H T EC  L+ +IE LIR+  LK FVG  R+   L     +    P  EIR I+G       G   G+   S+  Y+ A++N
Subjt:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN

Query:  ID------RKRLQRDPGIS
        +       R RL  +P IS
Subjt:  ID------RKRLQRDPGIS

XP_030948315.1 uncharacterized protein LOC115972240 [Quercus lobata]2.3e-2536.07Show/hide
Query:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS
        + FV  F+G +  ++   + LT++QG  ESL+ +I +F  E L V+  DD + L A    I++ L              E VL  I+D   LK PEK+  
Subjt:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM---ISASL--------------EQVLAAIQDTNLLKHPEKLGS

Query:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN
        DP++RN+NKYC FH DH H T EC  L+ +IE LIR+  LK FVG  R+   L     +    P  EIR I+G       G   G+   S+  Y+ A++N
Subjt:  DPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVGAAHGEQKMSRDCYIMALRN

Query:  ID------RKRLQRDPGIS
        +       R RL  +P IS
Subjt:  ID------RKRLQRDPGIS

TrEMBL top hitse value%identityAlignment
A0A2N9EM31 Ribonuclease H9.1e-2030.14Show/hide
Query:  RGSGKVRGRAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAMIS---------------------------------
        RGS     R F   F+GA+   +P  + L +KQ   E+L+ Y+ +F  E L V+G DD V LTA IS                                 
Subjt:  RGSGKVRGRAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAMIS---------------------------------

Query:  --------------------------ASLEQVLAAIQDTNLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNG-RS
                                  A ++ +   I++   LK P KL +DPD+R R+KYC FH DH H T++C  L+ +IE LI++  L+RFV  G R 
Subjt:  --------------------------ASLEQVLAAIQDTNLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNG-RS

Query:  KRPLPADQGKGGANPPLEI---RTILGEPSE-EGVGAAHGEQKMSRDCYIMALRNI-DRKRLQRDPGISLGLPKLFPQKSVR
         RP    QG     PP+E+      LGE     G  AA G  + SR  Y   +RN+   +++ + P +   LP +F ++  R
Subjt:  KRPLPADQGKGGANPPLEI---RTILGEPSE-EGVGAAHGEQKMSRDCYIMALRNI-DRKRLQRDPGISLGLPKLFPQKSVR

A0A6J1DWY0 uncharacterized protein LOC1110252932.2e-2130.59Show/hide
Query:  SGKVRGRAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAMIS-----------------------------------
        S K   RAFV QF+G R R +P    LT+KQ   ESL+DY+ +F  E LQVEG  D V+L A +S                                   
Subjt:  SGKVRGRAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAMIS-----------------------------------

Query:  --------------------------------------------------ASLEQVLAAIQDTNLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIP
                                                            +EQVL  I+D  LLK PE++ +   +R++ +YC+FH DH HATQ+C  
Subjt:  --------------------------------------------------ASLEQVLAAIQDTNLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIP

Query:  LRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVG
        L++E+E LIR  YLK +V     + P     G+   +P  EIRTI+G P E   G
Subjt:  LRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTILGEPSEEGVG

A0A6J1DXB1 uncharacterized protein LOC1110254127.0e-2030.26Show/hide
Query:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVAL--------------------------------TAMISASL------
        R F+ QF      +K   +  T++Q   E+L+ Y+ +F  E  +V  + D  A+                                TA + A L      
Subjt:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVAL--------------------------------TAMISASL------

Query:  -----EQVLAAIQDT---NLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTI
              ++L  I+++    LLK PEKL  DP+RRN++KYC FH +H H T  C  L+ +IE LI++ Y K+FVG  RS   +P+            +  +
Subjt:  -----EQVLAAIQDT---NLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTI

Query:  LGEPSEEGVGAAHGEQKMSRDCYIMALR
        L   +  GVG   GEQK SR+CY  AL+
Subjt:  LGEPSEEGVGAAHGEQKMSRDCYIMALR

A0A7J0DN86 Ribonuclease H2.0e-1934.43Show/hide
Query:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM------------------------ISASLEQVLAAIQDTNLLK
        R FV  F+  RNRQK   +  T+ Q   E+LKD++ +F   +L+VE   D V + AM                        + A + QVL+ I+    +K
Subjt:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVALTAM------------------------ISASLEQVLAAIQDTNLLK

Query:  HPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLP-ADQGKGGANPPL--EIRTILG
         P K+ +DP +RNRNKYC FH DH H T++C  L+++I  LI+  YL++++    +  PLP + + + G N P    I+TI G
Subjt:  HPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLP-ADQGKGGANPPL--EIRTILG

A0A7J0FUD1 Retrotrans_gag domain-containing protein1.2e-1929.46Show/hide
Query:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVA-------------------------------------------LTAM
        R FV  F+  RNRQK   +  TV Q   ESLKD++ +    +L+V+   D V+                                           + + 
Subjt:  RAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQVEGHDDGVA-------------------------------------------LTAM

Query:  ISASLEQVLAAIQDTNLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPAD-QGKGGANPPL--EIRTI
        ++A + QVL+ I+    +K P K+ +DP +RNRNKY  FH DH H T++C  L+++I  LI+  YL+++V    + RP P   + + G N P   +I+TI
Subjt:  ISASLEQVLAAIQDTNLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPAD-QGKGGANPPL--EIRTI

Query:  LG-------------EPSEEGVGAAHGEQKMSRDCYIMALR
         G              P+  G+G   G+Q+M+R C+I A++
Subjt:  LG-------------EPSEEGVGAAHGEQKMSRDCYIMALR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCAGCTCGTCCGTCCATCTTCATCTTCCACAACCCTCCCTTCCCACCATTTCCCCCTTGAAAGACTTAATCCTCCATTTCCCACCATTTTCCACCCCCAACACAG
AGTGTATCCCAATCCCTACCTCTCGCATCGCGCCGACGACCCACATCCGCCGTGCCGACGACCTTCTTCCGCCGTGCCGTCGAGACTCTTGCTTGCCCCACATCTTCCAT
CGATTCTCTTTCTGCGCGAGGACTGTACAATTTCTCAGAAATTCAAACCAAGGACCAGAAAATCGATCCAGAGGAAGGCAGGACCAAAGGGTCGGGCCATCATACGGTCG
GCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCACTTGCGTGGGCTGAGCTCGGTCGCCTCCTTTTGGCCCCTGATGCCTTTGATGCCCCAAATCGCCCCAGTTTTGC
CTGGTTCGTCCCGAAACACCTTCGGATTCCTGAAAACCCTAGGAGGAAAAACAGGTATAAAAACCTCTCTTCATCACTGAAGAAGGGGGGAAACTCTATGCTGGACTTCT
CCTTTTACTCTCTAGCTTCTCCTCGGTTTTCTGACTTAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTGCAGCGATTTTTGCTGGTCTTGCAGGTCACGTCTT
CCCCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTCAAGATGAATCGGGTTCAGAAACCAAAAGGAAACATCGGGGATGAGCAGAAAGCGTCGAACCAGACGGG
GGTCGACCTCGGTATGGAAAGGGCCGACCCTATCCGCGGAGACTGTTGTAAGGAAAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGAGCATTTGTTAAGCAATTCCTAG
GAGCCCGGAACCGACAGAAGCCTCAGATCAACTCGCTGACAGTAAAGCAAGGGCCTCGAGAAAGCTTGAAGGATTATATTAACAAATTTTGTAACGAAGTTTTGCAGGTA
GAAGGCCATGACGATGGAGTTGCCTTGACTGCTATGATTTCAGCTTCGCTTGAACAGGTCTTGGCCGCAATACAGGACACAAATCTGTTGAAACACCCAGAAAAGTTGGG
ATCAGACCCCGACAGGAGGAACAGAAACAAATACTGCATGTTCCACGAAGACCACAGTCACGCAACCCAGGAATGCATACCATTGAGGGACGAGATAGAAGCCCTAATCC
GAGAAGCTTACCTCAAGAGGTTCGTGGGGAACGGCAGAAGCAAGAGGCCACTGCCAGCAGATCAAGGTAAGGGCGGTGCCAACCCACCGCTCGAGATACGAACAATTTTA
GGAGAACCATCCGAAGAAGGTGTAGGAGCAGCGCATGGCGAGCAAAAGATGTCGAGGGATTGTTACATTATGGCGCTCAGGAACATCGACAGGAAGCGCTTGCAGAGAGA
CCCGGGAATCTCCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCTA
AGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCACAAGCTTTTTCCCCAGAAGAGTGTACGC
ACCCCCGGGATGACGACGATGCTTGAAGAGAGGCTCGAGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCCGGGATGACGACGATGCTTGA
AGAGAGGCTCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACCAGCTCGTCCGTCCATCTTCATCTTCCACAACCCTCCCTTCCCACCATTTCCCCCTTGAAAGACTTAATCCTCCATTTCCCACCATTTTCCACCCCCAACACAG
AGTGTATCCCAATCCCTACCTCTCGCATCGCGCCGACGACCCACATCCGCCGTGCCGACGACCTTCTTCCGCCGTGCCGTCGAGACTCTTGCTTGCCCCACATCTTCCAT
CGATTCTCTTTCTGCGCGAGGACTGTACAATTTCTCAGAAATTCAAACCAAGGACCAGAAAATCGATCCAGAGGAAGGCAGGACCAAAGGGTCGGGCCATCATACGGTCG
GCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCACTTGCGTGGGCTGAGCTCGGTCGCCTCCTTTTGGCCCCTGATGCCTTTGATGCCCCAAATCGCCCCAGTTTTGC
CTGGTTCGTCCCGAAACACCTTCGGATTCCTGAAAACCCTAGGAGGAAAAACAGGTATAAAAACCTCTCTTCATCACTGAAGAAGGGGGGAAACTCTATGCTGGACTTCT
CCTTTTACTCTCTAGCTTCTCCTCGGTTTTCTGACTTAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTGCAGCGATTTTTGCTGGTCTTGCAGGTCACGTCTT
CCCCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTCAAGATGAATCGGGTTCAGAAACCAAAAGGAAACATCGGGGATGAGCAGAAAGCGTCGAACCAGACGGG
GGTCGACCTCGGTATGGAAAGGGCCGACCCTATCCGCGGAGACTGTTGTAAGGAAAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGAGCATTTGTTAAGCAATTCCTAG
GAGCCCGGAACCGACAGAAGCCTCAGATCAACTCGCTGACAGTAAAGCAAGGGCCTCGAGAAAGCTTGAAGGATTATATTAACAAATTTTGTAACGAAGTTTTGCAGGTA
GAAGGCCATGACGATGGAGTTGCCTTGACTGCTATGATTTCAGCTTCGCTTGAACAGGTCTTGGCCGCAATACAGGACACAAATCTGTTGAAACACCCAGAAAAGTTGGG
ATCAGACCCCGACAGGAGGAACAGAAACAAATACTGCATGTTCCACGAAGACCACAGTCACGCAACCCAGGAATGCATACCATTGAGGGACGAGATAGAAGCCCTAATCC
GAGAAGCTTACCTCAAGAGGTTCGTGGGGAACGGCAGAAGCAAGAGGCCACTGCCAGCAGATCAAGGTAAGGGCGGTGCCAACCCACCGCTCGAGATACGAACAATTTTA
GGAGAACCATCCGAAGAAGGTGTAGGAGCAGCGCATGGCGAGCAAAAGATGTCGAGGGATTGTTACATTATGGCGCTCAGGAACATCGACAGGAAGCGCTTGCAGAGAGA
CCCGGGAATCTCCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCTA
AGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCACAAGCTTTTTCCCCAGAAGAGTGTACGC
ACCCCCGGGATGACGACGATGCTTGAAGAGAGGCTCGAGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCCGGGATGACGACGATGCTTGA
AGAGAGGCTCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCTAG
Protein sequenceShow/hide protein sequence
MHQLVRPSSSSTTLPSHHFPLERLNPPFPTIFHPQHRVYPNPYLSHRADDPHPPCRRPSSAVPSRLLLAPHLPSILFLREDCTISQKFKPRTRKSIQRKAGPKGRAIIRS
ASAKGRGRPFGPLAWAELGRLLLAPDAFDAPNRPSFAWFVPKHLRIPENPRRKNRYKNLSSSLKKGGNSMLDFSFYSLASPRFSDLGIGGGVAYTTPVCSDFCWSCRSRL
PQLLQIHCWCHVKVKMNRVQKPKGNIGDEQKASNQTGVDLGMERADPIRGDCCKEKVRGSGKVRGRAFVKQFLGARNRQKPQINSLTVKQGPRESLKDYINKFCNEVLQV
EGHDDGVALTAMISASLEQVLAAIQDTNLLKHPEKLGSDPDRRNRNKYCMFHEDHSHATQECIPLRDEIEALIREAYLKRFVGNGRSKRPLPADQGKGGANPPLEIRTIL
GEPSEEGVGAAHGEQKMSRDCYIMALRNIDRKRLQRDPGISLGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVRTPGMTTMLEERLGKFPGLHKLFPQKSVR
TPGMTTMLEERLEKFPGLPKLFPQKSVRTPGMTTMLEERLGKFLGLPKLFP