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Lag0015170 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015170
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:8324351..8324962
RNA-Seq ExpressionLag0015170
SyntenyLag0015170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]3.0e-0745.45Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE
        +FH DHGHAT++C  L++E+E LIR GY K +V     + P +   G+   +P  EIQTI+GG  E
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE

XP_022159110.1 uncharacterized protein LOC111025549 [Momordica charantia]3.0e-0745.45Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE
        +FH DHGHAT++C  L++E+E LIR GY K +V     + P  A  G+   +P  EI+TI+GG  E
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]2.3e-0746.27Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEE
        +FH DHGHAT +C  L++E+E LIR+GY K +V +D+   P   +  K   +P  EI+TI+GGS+E+
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEE

XP_023902012.1 uncharacterized protein LOC112013864 [Quercus suber]8.0e-0838.14Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSA
        FH DHGH T EC  L+ +IE LIR+G  K F+G D     L A   +    PL EI+ ILGGSS       G+   S++ Y  A+ ++    ++ +A
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSA

XP_023921045.1 uncharacterized protein LOC112032513 [Quercus suber]3.6e-0839.18Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSA
        FH DHGH T EC  L+ +IE LIR+G  K F+G D     L A   +    PL EI+ ILGGSS       G+   S++ Y  A+ ++    ++ SA
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSA

TrEMBL top hitse value%identityAlignment
A0A2N9IJ88 Ribonuclease H9.5e-0737.63Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGA-----NPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
        FH DHGH T EC+ L+++IE LIR+G  + +V    + RP      +  A      P+ EI+TI+GGS     A+ G  + SR+ Y   + NI
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGA-----NPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

A0A6J1DQL9 uncharacterized protein LOC1110229051.5e-0745.45Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE
        +FH DHGHAT++C  L++E+E LIR GY K +V     + P +   G+   +P  EIQTI+GG  E
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE

A0A6J1DWY0 uncharacterized protein LOC1110252934.3e-0743.94Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE
        +FH DHGHAT++C  L++E+E LIR GY K +V     + P     G+   +P  EI+TI+GG  E
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE

A0A6J1DXQ6 uncharacterized protein LOC1110255491.5e-0745.45Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE
        +FH DHGHAT++C  L++E+E LIR GY K +V     + P  A  G+   +P  EI+TI+GG  E
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSE

A0A6J1DZ52 uncharacterized protein LOC1110256121.1e-0746.27Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEE
        +FH DHGHAT +C  L++E+E LIR+GY K +V +D+   P   +  K   +P  EI+TI+GGS+E+
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCACGGAGACCACGGTCATGCAACCCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATTCGAGAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAT
AAGCAAGAGGCCACTGCTGGCAGATCAAGGTAAGGGCGGTGCCAACCCACTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCG
AGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCA
AGCTATCCCTTTCCAATGAAACCGCTTGCAGAGAGACTCGGGAGATTCCCAGGCCTCCCAAAGCTTTTCCCCAGAGGAATGTACGCACCCCTGGGAAGACCACAACACTT
GACCTGTTATCGTAGCCGAAGCGGTTCAAGCCGAAAGGGAGATGCTCTGCACATAAGTCGAGTCACGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCACGGAGACCACGGTCATGCAACCCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATTCGAGAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAT
AAGCAAGAGGCCACTGCTGGCAGATCAAGGTAAGGGCGGTGCCAACCCACTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCG
AGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCA
AGCTATCCCTTTCCAATGAAACCGCTTGCAGAGAGACTCGGGAGATTCCCAGGCCTCCCAAAGCTTTTCCCCAGAGGAATGTACGCACCCCTGGGAAGACCACAACACTT
GACCTGTTATCGTAGCCGAAGCGGTTCAAGCCGAAAGGGAGATGCTCTGCACATAAGTCGAGTCACGGGCTGA
Protein sequenceShow/hide protein sequence
MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRPLLADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSALGDGRGRAFEGS
SYPFPMKPLAERLGRFPGLPKLFPRGMYAPLGRPQHLTCYRSRSGSSRKGDALHISRVTG