; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015189 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015189
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr12:8478526..8479435
RNA-Seq ExpressionLag0015189
SyntenyLag0015189
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061653.1 zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa]4.4e-6087.31Show/hide
Query:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE
        MER NRGRRWA+LKQRLGLKGMGCC GSWSPTSSTLTMIEG  LS HGSSRS RE+ GRSSAASGMNLAMALAAERNLR+D+GGPTGA DVKSLMRLFEE
Subjt:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE

Query:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        MDG DWKTKRKEGENNGDWMCCVCMERSKG  ++
Subjt:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

KAG6589274.1 hypothetical protein SDJN03_17839, partial [Cucurbita argyrosperma subsp. sororia]4.4e-6078.71Show/hide
Query:  HFTRIPLWVSFDVRWQVEEEMERPNRGRRWASLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLR
        HFTR PLWV F    Q   EMERPNRG+RWA+LKQRLGL KGMGCCGGSWS TSSTLTMI+GIGLSRHGSSRSHR++  RSSAASGMNLAMALAAERNL 
Subjt:  HFTRIPLWVSFDVRWQVEEEMERPNRGRRWASLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLR

Query:  TDDGGPTGAGDVKSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        T++GGPT  G+VKSLMRLFEE+DG DWKT+RKE ENNGDW+CCVCMERSKG  ++
Subjt:  TDDGGPTGAGDVKSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

KAG7012019.1 hypothetical protein SDJN02_26927, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6086.57Show/hide
Query:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE
        MER N GRRWA+LKQRLGLKGMGCCGGSWSPTSSTLTMIEG+ LSRHGSSRSHRE+  RSSA+SG+NLAMALAAERNLRTD+GGPTGAGDVKSLMRLFEE
Subjt:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE

Query:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        MDG DWKTKRKE EN GDWMCCVCMERSKG  ++
Subjt:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

XP_022953088.1 RNA-binding protein MEX3B-like [Cucurbita moschata]2.0e-6086.57Show/hide
Query:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE
        MER N GRRWA+LKQRLGLKGMGCCGGSWSPTSSTLTMIEG+ LSRHGSSRSHRE+  RSSA+SG+NLAMALAAERNLRTD+GGPTGAGDVKSLMRLFEE
Subjt:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE

Query:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        MDG DWKTKRKE EN GDWMCCVCMERSKG  ++
Subjt:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

XP_023531397.1 uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo]6.8e-6179.35Show/hide
Query:  HFTRIPLWVSFDVRWQVEEEMERPNRGRRWASLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLR
        HFTR PLWV F    Q  EEMERPNRG+RWA+LKQRLGL KGMGCCGGSWS TSSTLTMI+GIGLSRHGSSRSHR++  RSSAASGMNLAMALAAERNL 
Subjt:  HFTRIPLWVSFDVRWQVEEEMERPNRGRRWASLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLR

Query:  TDDGGPTGAGDVKSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        T++GGPT  G+VKSLMRLFEE+DG DWKT+RKE ENNGDW+CCVCMERSKG  ++
Subjt:  TDDGGPTGAGDVKSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

TrEMBL top hitse value%identityAlignment
A0A0A0KEL6 RING-type domain-containing protein1.4e-5682.84Show/hide
Query:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE
        MER NR RRW +L+QRLGLKGMGCC GSWSPTSSTLTMIEG  LS HGSSRS  E+ GRSSAASGMNLAMALAAERNLR D+GGPTG  DVKSLMRLFEE
Subjt:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE

Query:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        MDG DWKTKRKE ENNGDWMCCVCMERSKG  ++
Subjt:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

A0A5A7V0I3 Zf-C3HC4_3 domain-containing protein2.1e-6087.31Show/hide
Query:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE
        MER NRGRRWA+LKQRLGLKGMGCC GSWSPTSSTLTMIEG  LS HGSSRS RE+ GRSSAASGMNLAMALAAERNLR+D+GGPTGA DVKSLMRLFEE
Subjt:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE

Query:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        MDG DWKTKRKEGENNGDWMCCVCMERSKG  ++
Subjt:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

A0A6J1EWQ9 uncharacterized protein LOC1114372261.8e-5977.42Show/hide
Query:  HFTRIPLWVSFDVRWQVEEEMERPNRGRRWASLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLR
        HFTR PLWV F    Q   EMERPNRG+RWA+LKQRLGL KG+GCCGGSWS TSSTLTMI+GIGLSRHGSSRSHR++  RSSAASGMNLAMALAAERNL 
Subjt:  HFTRIPLWVSFDVRWQVEEEMERPNRGRRWASLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLR

Query:  TDDGGPTGAGDVKSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        T++GGPT  G+VKSL+RLFEE+DG DWKT+RKE ENNGDW+CCVCMERSKG  ++
Subjt:  TDDGGPTGAGDVKSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

A0A6J1GME5 RNA-binding protein MEX3B-like9.6e-6186.57Show/hide
Query:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE
        MER N GRRWA+LKQRLGLKGMGCCGGSWSPTSSTLTMIEG+ LSRHGSSRSHRE+  RSSA+SG+NLAMALAAERNLRTD+GGPTGAGDVKSLMRLFEE
Subjt:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE

Query:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        MDG DWKTKRKE EN GDWMCCVCMERSKG  ++
Subjt:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

A0A6J1HXI8 RNA-binding protein MEX3B-like9.6e-6186.57Show/hide
Query:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE
        MER N GRRWA+LKQRLGLKGMGCCGGSWSPTSSTLTMIEG+ LSRHGSSRSHRE+  RSSA+SG+NLAMALAAERNLRTD+GGPTGAGDVKSLMRLFEE
Subjt:  MERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDVKSLMRLFEE

Query:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
        MDG DWKTKRKE EN GDWMCCVCMERSKG  ++
Subjt:  MDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G62370.1 RING/U-box superfamily protein6.2e-0430.77Show/hide
Query:  RWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEG-----------------IGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDV
        +W +LKQRL    +GCCG    P +  L   E                  +  S  G+      E    +  S  NLA ALA ER     +     A   
Subjt:  RWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEG-----------------IGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGAGDV

Query:  KSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
          LMRL  E DG D  T         D +CCVCM R KG  ++
Subjt:  KSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

AT4G03965.1 RING/U-box superfamily protein1.3e-0937.32Show/hide
Query:  RRWASLKQRLGLKGMGCCGGSWS--PTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGA-GDVK-SLMRLFE----
        RR  +LK+RLG K +GCCG +W    TS+T    +    +R  S   H           GMNLA ALAAERN RT++   +G+   +K SLMRL E    
Subjt:  RRWASLKQRLGLKGMGCCGGSWS--PTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGA-GDVK-SLMRLFE----

Query:  -------EMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV
               E + V           N D +CCVCM R KG  ++
Subjt:  -------EMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYV

AT4G22250.1 RING/U-box superfamily protein2.3e-0631.17Show/hide
Query:  VEEEMERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERG-----RSSAASGMNLAMALAAERNLRTDDGGPTGAGDV
        +  +M   +  RR  +LK+RL  K +GCCG +W+   +  T +     SR       + E G        + +GMNLA AL AER  R +          
Subjt:  VEEEMERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERG-----RSSAASGMNLAMALAAERNLRTDDGGPTGAGDV

Query:  K--SLMRLFEEMDGVDWKTKRKEGE---------NNGDWMCCVCMERSKGFGYV
        +  SLMRL EE          KE E            D +CCVCM R KG  ++
Subjt:  K--SLMRLFEEMDGVDWKTKRKEGE---------NNGDWMCCVCMERSKGFGYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCATTTCACCAGAATTCCTTTGTGGGTCTCTTTCGACGTTCGGTGGCAAGTTGAAGAGGAAATGGAGCGGCCAAATCGAGGGCGGAGATGGGCCAGTTTGAAGCA
ACGGCTAGGATTGAAGGGGATGGGTTGCTGTGGAGGTTCATGGAGTCCAACATCGTCAACTTTGACGATGATTGAAGGGATAGGCTTAAGCCGCCATGGCAGTAGCCGCA
GCCATAGAGAAGAAAGGGGTCGGAGCTCTGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGAGGACCGACGACGGAGGGCCCACCGGCGCC
GGTGATGTGAAATCACTGATGAGACTGTTCGAAGAAATGGACGGTGTGGATTGGAAGACAAAAAGAAAGGAGGGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCAT
GGAGAGGAGTAAAGGATTCGGATACGTCGAGGTTGATTTTTGGTTCGGTGTGGTGCTCGTCCAATACATTACGATGCTTGAGAGTTATGTGCTGAAAGCTAAGCTAGAGT
TGATAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCATTTCACCAGAATTCCTTTGTGGGTCTCTTTCGACGTTCGGTGGCAAGTTGAAGAGGAAATGGAGCGGCCAAATCGAGGGCGGAGATGGGCCAGTTTGAAGCA
ACGGCTAGGATTGAAGGGGATGGGTTGCTGTGGAGGTTCATGGAGTCCAACATCGTCAACTTTGACGATGATTGAAGGGATAGGCTTAAGCCGCCATGGCAGTAGCCGCA
GCCATAGAGAAGAAAGGGGTCGGAGCTCTGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGAGGACCGACGACGGAGGGCCCACCGGCGCC
GGTGATGTGAAATCACTGATGAGACTGTTCGAAGAAATGGACGGTGTGGATTGGAAGACAAAAAGAAAGGAGGGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCAT
GGAGAGGAGTAAAGGATTCGGATACGTCGAGGTTGATTTTTGGTTCGGTGTGGTGCTCGTCCAATACATTACGATGCTTGAGAGTTATGTGCTGAAAGCTAAGCTAGAGT
TGATAGATTAG
Protein sequenceShow/hide protein sequence
MFHFTRIPLWVSFDVRWQVEEEMERPNRGRRWASLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRHGSSRSHREERGRSSAASGMNLAMALAAERNLRTDDGGPTGA
GDVKSLMRLFEEMDGVDWKTKRKEGENNGDWMCCVCMERSKGFGYVEVDFWFGVVLVQYITMLESYVLKAKLELID