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Lag0015206 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015206
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBromo domain-containing protein
Genome locationchr12:8676524..8677129
RNA-Seq ExpressionLag0015206
SyntenyLag0015206
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061663.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]2.0e-1839.2Show/hide
Query:  KSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQL-------------------------FGDRKEMIVPIPATTKKPT---------
        K + P P   TT + A++   +     R +MLK RFAGTI KAQ+QL                           +R+E         K+PT         
Subjt:  KSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQL-------------------------FGDRKEMIVPIPATTKKPT---------

Query:  ------------------TEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN
                          TEE+R+ AR+ALE +ER+V+++DSHKSV+DL+RLCGWPIPYVGGF NRM Y GLYLKN
Subjt:  ------------------TEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN

KAG6571342.1 hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1536.22Show/hide
Query:  PTSPTKPRRVSARDLAPKATIVKKPRSPTKRRVISSRDLAPEARKSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFGDRKEM--
        P      R  S +  A K ++   P S TK + ++   + P    SSS                       R  +LK +FAGTI KAQ+ L  +RK++  
Subjt:  PTSPTKPRRVSARDLAPKATIVKKPRSPTKRRVISSRDLAPEARKSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFGDRKEM--

Query:  ------------------IVPIPA--------TTKKPTTEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN
                          +VP  A        T  K   EE+R  AR+ LE +ER V +DDSH S+R+ +RLCG+PIPYVGGFLNRMHY GLYLK+
Subjt:  ------------------IVPIPA--------TTKKPTTEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN

PQQ06297.1 hypothetical protein Pyn_02267 [Prunus yedoensis var. nudiflora]3.4e-0544.09Show/hide
Query:  SPRRAARTAMLKARFAGTIAKAQKQL-------FGDRKEMIVPIPATTKKPTTEEL-------RELARKALETMERTVELDDSHKSVRDLQRL
        SPRRAAR AMLKARFAGTI KA++++        G+ ++ I    A       E +       RE AR ALE MER V +DD+ K++RD + L
Subjt:  SPRRAARTAMLKARFAGTIAKAQKQL-------FGDRKEMIVPIPATTKKPTTEEL-------RELARKALETMERTVELDDSHKSVRDLQRL

RWW19087.1 hypothetical protein GW17_00016874 [Ensete ventricosum]9.8e-0535Show/hide
Query:  SSSPAPVTITT--SIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFG----------------DRKEMIVPIPATTK-KPTTEELRELARKALETME
        S  P+P+T  T   +   +   SP +A R AMLK+RFA TI KAQ+Q  G                 R++    I A  K +      RE AR AL+ ME
Subjt:  SSSPAPVTITT--SIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFG----------------DRKEMIVPIPATTK-KPTTEELRELARKALETME

Query:  RTVELDDSHKSVRDLQRLCGWPIP--------YVG----------GFLNRMHYLGLYLKN
        +TVE+D+SH  ++DL+ L G P+P         VG          G +N +  LGL++KN
Subjt:  RTVELDDSHKSVRDLQRLCGWPIP--------YVG----------GFLNRMHYLGLYLKN

RZS19084.1 hypothetical protein BHM03_00051432 [Ensete ventricosum]9.8e-0535Show/hide
Query:  SSSPAPVTITT--SIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFG----------------DRKEMIVPIPATTK-KPTTEELRELARKALETME
        S  P+P+T  T   +   +   SP +A R AMLK+RFA TI KAQ+Q  G                 R++    I A  K +      RE AR AL+ ME
Subjt:  SSSPAPVTITT--SIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFG----------------DRKEMIVPIPATTK-KPTTEELRELARKALETME

Query:  RTVELDDSHKSVRDLQRLCGWPIP--------YVG----------GFLNRMHYLGLYLKN
        +TVE+D+SH  ++DL+ L G P+P         VG          G +N +  LGL++KN
Subjt:  RTVELDDSHKSVRDLQRLCGWPIP--------YVG----------GFLNRMHYLGLYLKN

TrEMBL top hitse value%identityAlignment
A0A0A0KGL2 Uncharacterized protein4.1e-1737.97Show/hide
Query:  KSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFGDRK-----EMIVPIPATT----------------KKPT-------------
        K + P P   TT + A+       +  R +MLK+RFA TI KAQ+QL   ++     E   P PA T                KKPT             
Subjt:  KSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFGDRK-----EMIVPIPATT----------------KKPT-------------

Query:  -----------------------------TEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN
                                     TEE+R  AR+ALE +ER+V+++DSHKSV+DL+RLCGWPIP VGGF NRM Y GLYLKN
Subjt:  -----------------------------TEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN

A0A314XJ27 Uncharacterized protein6.2e-0543.01Show/hide
Query:  SPRRAARTAMLKARFAGTIAKAQKQLFGDRKEMIVPIPATTKKPTTEEL--------------RELARKALETMERTVELDDSHKSVRDLQRL
        SPRRAAR AMLKARFAGTI KA++++       +       KK    E+              RE AR ALE MER V +DD+ K++RD + L
Subjt:  SPRRAARTAMLKARFAGTIAKAQKQLFGDRKEMIVPIPATTKKPTTEEL--------------RELARKALETMERTVELDDSHKSVRDLQRL

A0A314YIV3 Uncharacterized protein1.6e-0544.09Show/hide
Query:  SPRRAARTAMLKARFAGTIAKAQKQL-------FGDRKEMIVPIPATTKKPTTEEL-------RELARKALETMERTVELDDSHKSVRDLQRL
        SPRRAAR AMLKARFAGTI KA++++        G+ ++ I    A       E +       RE AR ALE MER V +DD+ K++RD + L
Subjt:  SPRRAARTAMLKARFAGTIAKAQKQL-------FGDRKEMIVPIPATTKKPTTEEL-------RELARKALETMERTVELDDSHKSVRDLQRL

A0A444F921 Bromo domain-containing protein4.7e-0535Show/hide
Query:  SSSPAPVTITT--SIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFG----------------DRKEMIVPIPATTK-KPTTEELRELARKALETME
        S  P+P+T  T   +   +   SP +A R AMLK+RFA TI KAQ+Q  G                 R++    I A  K +      RE AR AL+ ME
Subjt:  SSSPAPVTITT--SIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFG----------------DRKEMIVPIPATTK-KPTTEELRELARKALETME

Query:  RTVELDDSHKSVRDLQRLCGWPIP--------YVG----------GFLNRMHYLGLYLKN
        +TVE+D+SH  ++DL+ L G P+P         VG          G +N +  LGL++KN
Subjt:  RTVELDDSHKSVRDLQRLCGWPIP--------YVG----------GFLNRMHYLGLYLKN

A0A5D3DC97 Transcription factor GTE9 isoform X49.8e-1939.2Show/hide
Query:  KSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQL-------------------------FGDRKEMIVPIPATTKKPT---------
        K + P P   TT + A++   +     R +MLK RFAGTI KAQ+QL                           +R+E         K+PT         
Subjt:  KSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQL-------------------------FGDRKEMIVPIPATTKKPT---------

Query:  ------------------TEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN
                          TEE+R+ AR+ALE +ER+V+++DSHKSV+DL+RLCGWPIPYVGGF NRM Y GLYLKN
Subjt:  ------------------TEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATAATTCCTACGCCAACGTCAGTTCTGTGAAATCTCGCAGAGTTGTTCGCGCGGATCTGCCACCGAACGCGACGACGGTGAATGCGACGGAGCCGACTTCTCC
GACGAAACCTCGCCGAGTCAGTGCTCGCGACTTGGCACCGAAGGCGACGATAGTGAAGAAGCCGCGTTCTCCGACAAAACGCCGAGTGATTAGCTCCCGTGATTTGGCTC
CGGAGGCGAGGAAGTCGAGTTCTCCGGCACCGGTGACGATCACAACATCAATCGCGGCACTGCAAACTCCGCCGTCACCGAGAAGAGCTGCTCGCACAGCGATGCTGAAA
GCTAGGTTCGCCGGTACGATCGCGAAAGCACAGAAGCAGCTTTTCGGCGATAGAAAGGAAATGATCGTTCCGATTCCGGCGACGACGAAGAAACCTACGACTGAAGAACT
GAGAGAATTGGCCCGAAAAGCTTTAGAGACGATGGAGCGGACTGTTGAGTTGGACGACAGCCATAAATCGGTGAGGGATTTGCAGCGCCTCTGTGGCTGGCCGATTCCGT
ACGTTGGTGGGTTTCTAAACAGAATGCATTACCTTGGTTTATATTTGAAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATAATTCCTACGCCAACGTCAGTTCTGTGAAATCTCGCAGAGTTGTTCGCGCGGATCTGCCACCGAACGCGACGACGGTGAATGCGACGGAGCCGACTTCTCC
GACGAAACCTCGCCGAGTCAGTGCTCGCGACTTGGCACCGAAGGCGACGATAGTGAAGAAGCCGCGTTCTCCGACAAAACGCCGAGTGATTAGCTCCCGTGATTTGGCTC
CGGAGGCGAGGAAGTCGAGTTCTCCGGCACCGGTGACGATCACAACATCAATCGCGGCACTGCAAACTCCGCCGTCACCGAGAAGAGCTGCTCGCACAGCGATGCTGAAA
GCTAGGTTCGCCGGTACGATCGCGAAAGCACAGAAGCAGCTTTTCGGCGATAGAAAGGAAATGATCGTTCCGATTCCGGCGACGACGAAGAAACCTACGACTGAAGAACT
GAGAGAATTGGCCCGAAAAGCTTTAGAGACGATGGAGCGGACTGTTGAGTTGGACGACAGCCATAAATCGGTGAGGGATTTGCAGCGCCTCTGTGGCTGGCCGATTCCGT
ACGTTGGTGGGTTTCTAAACAGAATGCATTACCTTGGTTTATATTTGAAGAACTAG
Protein sequenceShow/hide protein sequence
MKHNSYANVSSVKSRRVVRADLPPNATTVNATEPTSPTKPRRVSARDLAPKATIVKKPRSPTKRRVISSRDLAPEARKSSSPAPVTITTSIAALQTPPSPRRAARTAMLK
ARFAGTIAKAQKQLFGDRKEMIVPIPATTKKPTTEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN