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Lag0015216 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015216
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionActin-related protein 2/3 complex subunit
Genome locationchr12:8786500..8787276
RNA-Seq ExpressionLag0015216
SyntenyLag0015216
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449504.1 PREDICTED: actin-related protein 2/3 complex subunit 1A-like [Cucumis melo]9.7e-3594.81Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCI+PL+EP VSTIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

XP_022148037.1 actin-related protein 2/3 complex subunit 1A-like [Momordica charantia]2.2e-3492.21Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQP+ GVGNDSVESSRLRGCVHENCINCI+PLREP+ STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

XP_022952913.1 actin-related protein 2/3 complex subunit 1B isoform X1 [Cucurbita moschata]8.2e-3493.51Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQ +QGVGNDSVESSRLRGCVHENCI CI+PLREP VSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

XP_023553744.1 actin-related protein 2/3 complex subunit 1B-like isoform X1 [Cucurbita pepo subsp. pepo]8.2e-3493.51Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQ +QGVGNDSVESSRLRGCVHENCI CI+PLREP VSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

XP_038886984.1 actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida]1.4e-3394.81Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCIN I+PLRE  VSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

TrEMBL top hitse value%identityAlignment
A0A1S3BM68 Actin-related protein 2/3 complex subunit4.7e-3594.81Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCI+PL+EP VSTIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

A0A6J1D3Z7 Actin-related protein 2/3 complex subunit1.0e-3492.21Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQP+ GVGNDSVESSRLRGCVHENCINCI+PLREP+ STIKRFSTSGLDGKVVIWDLEGQ DLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

A0A6J1ERW9 Actin-related protein 2/3 complex subunit8.9e-3493.51Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQPRQGVGN+SVESSRLRG VHENCINCI+PLRE RVSTIKRFSTSGLDGKV IWDLEGQADLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

A0A6J1GLX8 Actin-related protein 2/3 complex subunit4.0e-3493.51Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQ +QGVGNDSVESSRLRGCVHENCI CI+PLREP VSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

A0A6J1I2I5 Actin-related protein 2/3 complex subunit1.5e-3392.21Show/hide
Query:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
        QFSEAFGKLYGQ +QGVGND VESSRLRGCVHENCI CI+PLREP VSTIKRFSTSGLDGKVVIWDLEGQADLSQYL
Subjt:  QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL

SwissProt top hitse value%identityAlignment
O80856 Actin-related protein 2/3 complex subunit 1A4.4e-1459.42Show/hide
Query:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE
        QFSEAFGK YG Q +    ND+ ES   RG VH+NCIN I+ L +     + RFSTSGLDGKV IWDLE
Subjt:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE

Q9SJW6 Actin-related protein 2/3 complex subunit 1B1.9e-1255.07Show/hide
Query:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE
        QFSEAFGK YG Q +    ND+ +S   RG VH+N I  I+PL +     + RFSTSGLDGK+ IWDLE
Subjt:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE

Arabidopsis top hitse value%identityAlignment
AT2G30910.1 actin-related protein C1A3.1e-1559.42Show/hide
Query:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE
        QFSEAFGK YG Q +    ND+ ES   RG VH+NCIN I+ L +     + RFSTSGLDGKV IWDLE
Subjt:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE

AT2G30910.2 actin-related protein C1A3.1e-1559.42Show/hide
Query:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE
        QFSEAFGK YG Q +    ND+ ES   RG VH+NCIN I+ L +     + RFSTSGLDGKV IWDLE
Subjt:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE

AT2G30910.3 actin-related protein C1A3.1e-1559.42Show/hide
Query:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE
        QFSEAFGK YG Q +    ND+ ES   RG VH+NCIN I+ L +     + RFSTSGLDGKV IWDLE
Subjt:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE

AT2G31300.1 actin-related protein C1B1.3e-1355.07Show/hide
Query:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE
        QFSEAFGK YG Q +    ND+ +S   RG VH+N I  I+PL +     + RFSTSGLDGK+ IWDLE
Subjt:  QFSEAFGKLYG-QPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTTTTAGACTTTGCTAACTGGTTTTACTGGCACGCTGATCTTGTGAAAATCGATCAGTTTTCAGAAGCATTTGGGAAATTATATGGTCAACCAAGGCAAGGTGT
TGGCAACGATTCAGTTGAATCTTCAAGATTGCGCGGATGTGTCCACGAGAATTGCATAAATTGTATTATGCCTCTTAGAGAGCCAAGAGTTTCCACTATAAAGCGATTCA
GCACTTCAGGTTTGGATGGAAAAGTGGTTATTTGGGACTTGGAGGGCCAGGCTGATCTATCTCAATACTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTTTTAGACTTTGCTAACTGGTTTTACTGGCACGCTGATCTTGTGAAAATCGATCAGTTTTCAGAAGCATTTGGGAAATTATATGGTCAACCAAGGCAAGGTGT
TGGCAACGATTCAGTTGAATCTTCAAGATTGCGCGGATGTGTCCACGAGAATTGCATAAATTGTATTATGCCTCTTAGAGAGCCAAGAGTTTCCACTATAAAGCGATTCA
GCACTTCAGGTTTGGATGGAAAAGTGGTTATTTGGGACTTGGAGGGCCAGGCTGATCTATCTCAATACTTGTGA
Protein sequenceShow/hide protein sequence
MQVLDFANWFYWHADLVKIDQFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIMPLREPRVSTIKRFSTSGLDGKVVIWDLEGQADLSQYL