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Lag0015268 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015268
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr12:9398361..9398916
RNA-Seq ExpressionLag0015268
SyntenyLag0015268
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044274 - E3 ubiquitin-protein ligase RFI2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590448.1 E3 ubiquitin-protein ligase RFI2, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3094.2Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG V CSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

KAG7023984.1 E3 ubiquitin-protein ligase RFI2 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3094.2Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG V CSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

XP_008450612.1 PREDICTED: uncharacterized protein LOC103492151 [Cucumis melo]2.4e-3195.65Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG VPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

XP_022961396.1 E3 ubiquitin-protein ligase RFI2-like [Cucurbita moschata]2.1e-3094.2Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG V CSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

XP_022968727.1 E3 ubiquitin-protein ligase RFI2-like [Cucurbita maxima]2.1e-3094.2Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG V CSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

TrEMBL top hitse value%identityAlignment
A0A0A0LVZ9 RING-type domain-containing protein2.9e-3092.75Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGD GC AGGGKSFG VPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

A0A1S3BNZ2 uncharacterized protein LOC1034921511.2e-3195.65Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG VPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

A0A5A7U6U7 RING-type domain-containing protein1.2e-3195.65Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG VPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

A0A6J1HA91 E3 ubiquitin-protein ligase RFI2-like1.0e-3094.2Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG V CSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

A0A6J1HUB6 E3 ubiquitin-protein ligase RFI2-like1.0e-3094.2Show/hide
Query:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        MGLGNDDDAVAEDGDYGDGGCGAGGGKSFG V CSICLDVVADSGDRSWAKLQCGHQFHLDCIGS FN+
Subjt:  MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

SwissProt top hitse value%identityAlignment
O82239 E3 ubiquitin-protein ligase RFI22.5e-1059.65Show/hide
Query:  GGCGAG------GGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        GGC  G         S   V CSICL+ V D G RS AKLQCGHQFHLDCIGS FN+
Subjt:  GGCGAG------GGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

Arabidopsis top hitse value%identityAlignment
AT2G15260.1 RING/U-box superfamily protein7.2e-0548.65Show/hide
Query:  CSICLDVVADSGD--RSWAKLQCGHQFHLDCIGSTFN
        CSIC   + +  D  R+   L+C H+FHLDCIGS +N
Subjt:  CSICLDVVADSGD--RSWAKLQCGHQFHLDCIGSTFN

AT2G47700.1 RING/U-box superfamily protein1.8e-1159.65Show/hide
Query:  GGCGAG------GGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV
        GGC  G         S   V CSICL+ V D G RS AKLQCGHQFHLDCIGS FN+
Subjt:  GGCGAG------GGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNV

AT3G05545.1 RING/U-box superfamily protein5.8e-1557.75Show/hide
Query:  MGLGNDDDAV-AEDGDYGDGGCGAGG--GKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFN
        MGLGN  +     D D  D   GA G  G  FG V CSICL+ V  +GDR+WA LQC HQFHLDCIGS FN
Subjt:  MGLGNDDDAV-AEDGDYGDGGCGAGG--GKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFN

AT4G13490.1 RING/U-box superfamily protein1.5e-0751.35Show/hide
Query:  CSICLDVVA-DSGDRSWAKLQCGHQFHLDCIGSTFNV
        C++CL+ +A D+ +R+  KL+C H+FHLDC+GS+FN+
Subjt:  CSICLDVVA-DSGDRSWAKLQCGHQFHLDCIGSTFNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGGGTAACGACGACGATGCTGTGGCTGAAGATGGCGATTATGGCGACGGAGGATGTGGCGCCGGTGGTGGCAAGTCCTTTGGTTATGTCCCATGTTCGATCTG
TCTCGATGTTGTTGCCGACTCTGGGGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGATTGCATTGGTTCAACATTCAATGTAACCAAAGGACTTG
CCACCACCGGCGCCGGCGACGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTGGGTAACGACGACGATGCTGTGGCTGAAGATGGCGATTATGGCGACGGAGGATGTGGCGCCGGTGGTGGCAAGTCCTTTGGTTATGTCCCATGTTCGATCTG
TCTCGATGTTGTTGCCGACTCTGGGGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGATTGCATTGGTTCAACATTCAATGTAACCAAAGGACTTG
CCACCACCGGCGCCGGCGACGGGTGA
Protein sequenceShow/hide protein sequence
MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGYVPCSICLDVVADSGDRSWAKLQCGHQFHLDCIGSTFNVTKGLATTGAGDG