| GenBank top hits | e value | %identity | Alignment |
|---|
| GEW19298.1 peroxidase 72 [Tanacetum cinerariifolium] | 1.7e-50 | 55.5 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGSVMYL
MDVKT FLNG+L E+IYM QPEGFV+ GQE KVC+L KS YGLK APKQ +EKF++TL++N F +N D CVY K + +VIICL+VD+MLI G+ M +
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGSVMYL
Query: MNYTR---------PDIAYVVSRLSSSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGASIPV-SLHCDSQAAYT
+N T+ DI L +ST+GYVF GG A S KS KQT RSTME+EF++LE A +EAEWLRS L+ +PLW + V +HCDS AA T
Subjt: MNYTR---------PDIAYVVSRLSSSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGASIPV-SLHCDSQAAYT
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| KAD6453934.1 hypothetical protein E3N88_08640 [Mikania micrantha] | 2.4e-52 | 41.44 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
MDVKT FLNGDL EEIYM+QPEGFV+ G E KVC+L+KSLYGLKQAPK+ YEKF+ TL + ++VN+SD+CVYSK YV+ICL+VD+MLIF
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
Query: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
GSVM+LMNYTRPDIA
Subjt: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
Query: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Y VSRLS SST+GYVF+ GGGA S KS KQTCI RSTMESEFI LELA
Subjt: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Query: EQEAEWLRSLLQDVPLWGAS-IPVSLHCDSQAA
QEAEWLR LL D+P WG + +P+ LHCDS+AA
Subjt: EQEAEWLRSLLQDVPLWGAS-IPVSLHCDSQAA
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| KAG7551885.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | 2.3e-47 | 40.54 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLI-------
MDVKT FLNGDL EEIYM+QPEGF+I GQE+KVC+L KSLYGLKQAPKQ +EKF++TL+ N F+ N DTCV+SK+ YVIICL+VD+MLI
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLI-------
Query: ------------------------------------------------------------------------------------FGSVMYLMNYTRPDIA
GSVMYLMN TRPDIA
Subjt: ------------------------------------------------------------------------------------FGSVMYLMNYTRPDIA
Query: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
YVVSRLS +ST+G+VF GGA + KS KQTCI RSTMESE I LELA
Subjt: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Query: EQEAEWLRSLLQDVPLWGASIP-VSLHCDSQAA
QEAEWLR+LL D P+ G P VS+ CDSQAA
Subjt: EQEAEWLRSLLQDVPLWGASIP-VSLHCDSQAA
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| RVW67328.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.3e-50 | 52.11 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGS----
MDVKTTFLNG+L EEIYM QPEGF+ PGQE KVC+L KSLYGLKQAPKQ +EKF++ +++N F +N D C+Y K YVI+CL+VD+MLI GS
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGS----
Query: -------VMYLMNYTRPDIAYVV-------------SRLSSSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGAS
+ Y NY Y S+ S ST+GYVF GG S KS KQTCI RSTMESEFI ++ A +EA+WLR+ L+D+P W
Subjt: -------VMYLMNYTRPDIAYVV-------------SRLSSSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGAS
Query: IP-VSLHCDSQAA
+P + +HCDSQ A
Subjt: IP-VSLHCDSQAA
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.9e-58 | 43.67 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
MDVKT FLNG+L+EEIYM QPEGF I GQE+KVC+L+KSLYGLKQAPKQ YEKFN+TL+ N F +NSSDTCVYSK+ G D ++ICL+VD+MLIF
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
Query: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
GSVMYLMNYTRPDIA
Subjt: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
Query: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Y VSRLS +ST+GYVF+ GGGA S KS KQTCI RSTMESEFI LELA
Subjt: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Query: EQEAEWLRSLLQDVPLWGASIPVSLHCDSQAA
QEAEW+++LL DVPLWG S+PVS+ CDSQAA
Subjt: EQEAEWLRSLLQDVPLWGASIPVSLHCDSQAA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9EQT1 Integrase catalytic domain-containing protein | 1.4e-50 | 41.14 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
MDVKT FLNGDL EEIYM QPEGFV+ GQE+KVC+L+KSLYGLKQAPKQ +EKF+ TLV+N F VN SD CVYSK G VIICL+VD+MLIF
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
Query: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
GSVM+LMN TRPDIA
Subjt: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
Query: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Y VSRLS +ST+GYVF GGGA S KS KQTC RSTMESEF+ LE A
Subjt: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Query: EQEAEWLRSLLQDVPLWGASIP-VSLHCDSQAA
EAEWLR+LL D+PLW +P +++HCDSQAA
Subjt: EQEAEWLRSLLQDVPLWGASIP-VSLHCDSQAA
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| A0A2N9H4B0 Uncharacterized protein | 1.4e-50 | 41.14 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
MDVKT FLNGDL EEIYM QPEGFV+ GQE+KVC+L+KSLYGLKQAPKQ +EKF+ TLV+N F VN SD CVYSK G VIICL+VD+MLIF
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
Query: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
GSVM+LMN TRPDIA
Subjt: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
Query: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Y VSRLS +ST+GYVF GGGA S KS KQTC RSTMESEF+ LE A
Subjt: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Query: EQEAEWLRSLLQDVPLWGASIP-VSLHCDSQAA
EAEWLR+LL D+PLW +P +++HCDSQAA
Subjt: EQEAEWLRSLLQDVPLWGASIP-VSLHCDSQAA
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| A0A438G546 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.4e-51 | 52.11 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGS----
MDVKTTFLNG+L EEIYM QPEGF+ PGQE KVC+L KSLYGLKQAPKQ +EKF++ +++N F +N D C+Y K YVI+CL+VD+MLI GS
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGS----
Query: -------VMYLMNYTRPDIAYVV-------------SRLSSSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGAS
+ Y NY Y S+ S ST+GYVF GG S KS KQTCI RSTMESEFI ++ A +EA+WLR+ L+D+P W
Subjt: -------VMYLMNYTRPDIAYVV-------------SRLSSSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGAS
Query: IP-VSLHCDSQAA
+P + +HCDSQ A
Subjt: IP-VSLHCDSQAA
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 1.4e-58 | 43.67 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
MDVKT FLNG+L+EEIYM QPEGF I GQE+KVC+L+KSLYGLKQAPKQ YEKFN+TL+ N F +NSSDTCVYSK+ G D ++ICL+VD+MLIF
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
Query: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
GSVMYLMNYTRPDIA
Subjt: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
Query: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Y VSRLS +ST+GYVF+ GGGA S KS KQTCI RSTMESEFI LELA
Subjt: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Query: EQEAEWLRSLLQDVPLWGASIPVSLHCDSQAA
QEAEW+++LL DVPLWG S+PVS+ CDSQAA
Subjt: EQEAEWLRSLLQDVPLWGASIPVSLHCDSQAA
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| A0A5N6PGV2 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.2e-52 | 41.44 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
MDVKT FLNGDL EEIYM+QPEGFV+ G E KVC+L+KSLYGLKQAPK+ YEKF+ TL + ++VN+SD+CVYSK YV+ICL+VD+MLIF
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIF------
Query: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
GSVM+LMNYTRPDIA
Subjt: -------------------------------------------------------------------------------------GSVMYLMNYTRPDIA
Query: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Y VSRLS SST+GYVF+ GGGA S KS KQTCI RSTMESEFI LELA
Subjt: YVVSRLS-----------------------------------------------------SSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELA
Query: EQEAEWLRSLLQDVPLWGAS-IPVSLHCDSQAA
QEAEWLR LL D+P WG + +P+ LHCDS+AA
Subjt: EQEAEWLRSLLQDVPLWGAS-IPVSLHCDSQAA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.1e-13 | 45.19 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFG--VDYVIICLFVDEMLIFGSVM
MDVKT FLNG LKEEIYM P+G I D VC+L K++YGLKQA + +E F L EF+ +S D C+Y G + + + L+VD+++I M
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFG--VDYVIICLFVDEMLIFGSVM
Query: YLMN
MN
Subjt: YLMN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.7e-22 | 50 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGV-DYVIICLFVDEMLIFGSVMY
+DVKT FL+GDL+EEIYM QPEGF + G++ VC+L KSLYGLKQAP+Q Y KF+S + + ++ SD CVY K F +++I+ L+VD+MLI G
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGV-DYVIICLFVDEMLIFGSVMY
Query: LMNYTRPDIA
L+ + D++
Subjt: LMNYTRPDIA
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.1e-07 | 37.63 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLI
MDV T FLN + E IY+ QP GFV D V +L +YGLKQAP E N+TL F + + +Y + + I ++VD++L+
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-12 | 35.78 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGSVMYL
+DV FL G L +++YM QP GF+ + + VC+L+K+LYGLKQAP+ Y + + L+ F+ + SDT ++ G V + ++VD++LI G+ L
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGSVMYL
Query: MNYTRPDIA
++ T +++
Subjt: MNYTRPDIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-03 | 35.21 | Show/hide |
Query: STNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGASIPVSLHCDSQAA
STNGY+ G S S+KQ +VRS+ E+E+ ++ E +W+ SLL ++ + PV ++CD+ A
Subjt: STNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGASIPVSLHCDSQAA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.3e-13 | 38.46 | Show/hide |
Query: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGSVMYL
+DV FL G L +E+YM QP GFV + D VC+L+K++YGLKQAP+ Y + + L+ F+ + SDT ++ G + + ++VD++LI G+ L
Subjt: MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGSVMYL
Query: MNYT
+ +T
Subjt: MNYT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.6e-04 | 35.21 | Show/hide |
Query: STNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGASIPVSLHCDSQAA
STNGY+ G S S+KQ +VRS+ E+E+ ++ E +W+ SLL ++ + + PV ++CD+ A
Subjt: STNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGASIPVSLHCDSQAA
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