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Lag0015341 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015341
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr12:10867989..10868713
RNA-Seq ExpressionLag0015341
SyntenyLag0015341
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155000.1 uncharacterized protein LOC111022144 [Momordica charantia]2.5e-1748.24Show/hide
Query:  SSDDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        S  ++ FI+DFK YGPPTFDG  E AT AE+W+ +LEA + YL CED+  V+G++F+LR +A  WW SI  +E+ A+  +  + F
Subjt:  SSDDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]4.2e-1746.34Show/hide
Query:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        +++FI+DFK YGPPTFDG  E AT  E+W+ +LEA++ YL CED+  V+G++F+LR +A  WW S+  +E++A+  +  + F
Subjt:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]1.9e-1750.6Show/hide
Query:  DDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        D+ QFIRDFKC+GPP F+G  E  T AE+WV +LEA++ YL C D   VRG++F+LR +A  WW+S+  +E+ A+  VT + F
Subjt:  DDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

XP_022156330.1 uncharacterized protein LOC111023250 [Momordica charantia]1.1e-1751.22Show/hide
Query:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        ++QFI+DFK YGPPTFDG  ++AT AE+WV +LEA++ YL CED+  V+G++F+LR +A  WW S+  +E+ A+  VT + F
Subjt:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

XP_022158749.1 uncharacterized protein LOC111025213 [Momordica charantia]4.2e-1747.56Show/hide
Query:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        +++FI+DFK YGPPTFDG  E AT AE+W+ +LEA++ YL CED+  V+G++F+LR +A  WW S+  +E+ A+  +  + F
Subjt:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

TrEMBL top hitse value%identityAlignment
A0A6J1DL73 uncharacterized protein LOC1110221441.2e-1748.24Show/hide
Query:  SSDDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        S  ++ FI+DFK YGPPTFDG  E AT AE+W+ +LEA + YL CED+  V+G++F+LR +A  WW SI  +E+ A+  +  + F
Subjt:  SSDDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

A0A6J1DQ01 uncharacterized protein LOC1110232505.4e-1851.22Show/hide
Query:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        ++QFI+DFK YGPPTFDG  ++AT AE+WV +LEA++ YL CED+  V+G++F+LR +A  WW S+  +E+ A+  VT + F
Subjt:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

A0A6J1DQB9 Reverse transcriptase9.2e-1850.6Show/hide
Query:  DDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        D+ QFIRDFKC+GPP F+G  E  T AE+WV +LEA++ YL C D   VRG++F+LR +A  WW+S+  +E+ A+  VT + F
Subjt:  DDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

A0A6J1DUM2 uncharacterized protein LOC1110232472.0e-1746.34Show/hide
Query:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        +++FI+DFK YGPPTFDG  E AT  E+W+ +LEA++ YL CED+  V+G++F+LR +A  WW S+  +E++A+  +  + F
Subjt:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

A0A6J1E0B4 uncharacterized protein LOC1110252132.0e-1747.56Show/hide
Query:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF
        +++FI+DFK YGPPTFDG  E AT AE+W+ +LEA++ YL CED+  V+G++F+LR +A  WW S+  +E+ A+  +  + F
Subjt:  DSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMWWKSIEGSEEFADELVTLSNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCTCAACCTCCTCTCCATCACCAGGCCTCCCCGTGGACGAAGACCTAGAGACCAGGGCAATAGACAGGAGAACTTGGAAGATGCGGTTGGAGCTCAACATGGA
GCAAACCTCCTCCACATCCTGCCATTCCTCAGATGACTCTCAATTCATAAGAGATTTTAAGTGCTATGGACCTCCGACTTTTGATGGTCGTTTAGAGGAAGCCACTGAGG
CAGAGCAGTGGGTCGCAGATCTTGAAGCCATGTTCGACTACCTGGATTGTGAAGATCGTTTGAATGTGAGAGGATCAATTTTCATACTCCGGGATAAAGCTCGGATGTGG
TGGAAATCTATTGAAGGCTCTGAAGAGTTTGCAGATGAGCTAGTGACGTTGTCAAACTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCTCAACCTCCTCTCCATCACCAGGCCTCCCCGTGGACGAAGACCTAGAGACCAGGGCAATAGACAGGAGAACTTGGAAGATGCGGTTGGAGCTCAACATGGA
GCAAACCTCCTCCACATCCTGCCATTCCTCAGATGACTCTCAATTCATAAGAGATTTTAAGTGCTATGGACCTCCGACTTTTGATGGTCGTTTAGAGGAAGCCACTGAGG
CAGAGCAGTGGGTCGCAGATCTTGAAGCCATGTTCGACTACCTGGATTGTGAAGATCGTTTGAATGTGAGAGGATCAATTTTCATACTCCGGGATAAAGCTCGGATGTGG
TGGAAATCTATTGAAGGCTCTGAAGAGTTTGCAGATGAGCTAGTGACGTTGTCAAACTTCTAG
Protein sequenceShow/hide protein sequence
MSFSTSSPSPGLPVDEDLETRAIDRRTWKMRLELNMEQTSSTSCHSSDDSQFIRDFKCYGPPTFDGRLEEATEAEQWVADLEAMFDYLDCEDRLNVRGSIFILRDKARMW
WKSIEGSEEFADELVTLSNF