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Lag0015346 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015346
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposase
Genome locationchr12:11062720..11063397
RNA-Seq ExpressionLag0015346
SyntenyLag0015346
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK04159.1 transposase [Cucumis melo var. makuwa]1.2e-1939.73Show/hide
Query:  MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDI
        MDKSWM +NRMS EY +GVE FI+  L  +  SN I CPCL+                        YK W WHGE L  +   + + + G E + E +D+
Subjt:  MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDI

Query:  DDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
         + + M  +AHD   + S+ F+ + DD KKPLY  CK F+K+SALV
Subjt:  DDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

TYK18888.1 transposase [Cucumis melo var. makuwa]1.2e-1939.73Show/hide
Query:  MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDI
        MDKSWM +NRMS EY +GVE FI+  L  +  SN I CPCL+                        YK W WHGE L  +   + + + G E + E +D+
Subjt:  MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDI

Query:  DDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
         + + M  +AHD   + S+ F+ + DD KKPLY  CK F+K+SALV
Subjt:  DDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

XP_022145911.1 uncharacterized protein LOC111015258 [Momordica charantia]1.1e-2045.59Show/hide
Query:  MSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDIDDVIGMFNAA
        MS EY LGVE FIEN LR S  SN I CPCL                         YK WIWHGE LP+K  + + ++ GKE  D D+ I +   MF AA
Subjt:  MSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDIDDVIGMFNAA

Query:  HDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
         DY +++S  FE+VL D +KPLYS+ KNF+K+ AL+
Subjt:  HDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

XP_022150919.1 uncharacterized protein LOC111018955 [Momordica charantia]5.4e-3655.86Show/hide
Query:  DKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDID
        DKSWMTKNRM  EY +GVEMFIEN LR S RSNVICCPCL+                        YKTWIWHGES+ +KRN  ++S+S +E + ED+D D
Subjt:  DKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDID

Query:  DVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
        D IGMF AA+DY ++    FEE+L D KKPLY NCKNF+KI AL+
Subjt:  DVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

XP_022158786.1 uncharacterized protein LOC111025252 [Momordica charantia]3.5e-3556.55Show/hide
Query:  DKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDID
        DKSWMTK+RMS EY LGVEMFIEN LR S RSNVICCPCL+                        YKT IWHGES+ +KRN  ++S+S +E E  D+D D
Subjt:  DKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDID

Query:  DVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
        D IG F AA+DY +D    FEE+L D KKPLY NCKNF+KISAL+
Subjt:  DVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

TrEMBL top hitse value%identityAlignment
A0A5D3C1B5 Transposase5.8e-2039.73Show/hide
Query:  MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDI
        MDKSWM +NRMS EY +GVE FI+  L  +  SN I CPCL+                        YK W WHGE L  +   + + + G E + E +D+
Subjt:  MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDI

Query:  DDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
         + + M  +AHD   + S+ F+ + DD KKPLY  CK F+K+SALV
Subjt:  DDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

A0A5D3D5Q1 Transposase5.8e-2039.73Show/hide
Query:  MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDI
        MDKSWM +NRMS EY +GVE FI+  L  +  SN I CPCL+                        YK W WHGE L  +   + + + G E + E +D+
Subjt:  MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDI

Query:  DDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
         + + M  +AHD   + S+ F+ + DD KKPLY  CK F+K+SALV
Subjt:  DDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

A0A6J1CXT3 uncharacterized protein LOC1110152585.3e-2145.59Show/hide
Query:  MSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDIDDVIGMFNAA
        MS EY LGVE FIEN LR S  SN I CPCL                         YK WIWHGE LP+K  + + ++ GKE  D D+ I +   MF AA
Subjt:  MSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDIDDVIGMFNAA

Query:  HDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
         DY +++S  FE+VL D +KPLYS+ KNF+K+ AL+
Subjt:  HDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

A0A6J1DBH3 uncharacterized protein LOC1110189552.6e-3655.86Show/hide
Query:  DKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDID
        DKSWMTKNRM  EY +GVEMFIEN LR S RSNVICCPCL+                        YKTWIWHGES+ +KRN  ++S+S +E + ED+D D
Subjt:  DKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDID

Query:  DVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
        D IGMF AA+DY ++    FEE+L D KKPLY NCKNF+KI AL+
Subjt:  DVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

A0A6J1E201 uncharacterized protein LOC1110252521.7e-3556.55Show/hide
Query:  DKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDID
        DKSWMTK+RMS EY LGVEMFIEN LR S RSNVICCPCL+                        YKT IWHGES+ +KRN  ++S+S +E E  D+D D
Subjt:  DKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLR------------------------YKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDID

Query:  DVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV
        D IG F AA+DY +D    FEE+L D KKPLY NCKNF+KISAL+
Subjt:  DVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYSNCKNFSKISALV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGTCGTGGATGACAAAGAATCGGATGTCACCAGAATATGGTCTAGGGGTTGAGATGTTCATTGAAAATGCACTACGACAGTCAAGTAGGTCAAATGTCATTTG
TTGTCCATGTTTGCGCTATAAAACATGGATTTGGCATGGTGAATCACTACCGGTTAAGAGAAATAATACAAACGTCTCTTCTAGTGGAAAAGAAGGAGAGGATGAAGATG
AAGATATTGATGACGTTATAGGAATGTTTAACGCTGCACATGATTACGTTAACGATGAATCCCACGTTTTTGAGGAAGTACTGGATGATGTCAAGAAACCATTGTACTCA
AATTGTAAGAACTTTTCCAAAATATCTGCATTGGTATGTTCTCCTGCAAAACCTAAAAGGAATGTGTCTGTTGCACAATCTTCCGAACATACAGATACCCACGATACCAT
CAAGTTGCTGAATCGATATGTCGCTCTTTCCATGGGAGGGGATGACACAATTCCTATCAAATTGAGTGACACCATTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGTCGTGGATGACAAAGAATCGGATGTCACCAGAATATGGTCTAGGGGTTGAGATGTTCATTGAAAATGCACTACGACAGTCAAGTAGGTCAAATGTCATTTG
TTGTCCATGTTTGCGCTATAAAACATGGATTTGGCATGGTGAATCACTACCGGTTAAGAGAAATAATACAAACGTCTCTTCTAGTGGAAAAGAAGGAGAGGATGAAGATG
AAGATATTGATGACGTTATAGGAATGTTTAACGCTGCACATGATTACGTTAACGATGAATCCCACGTTTTTGAGGAAGTACTGGATGATGTCAAGAAACCATTGTACTCA
AATTGTAAGAACTTTTCCAAAATATCTGCATTGGTATGTTCTCCTGCAAAACCTAAAAGGAATGTGTCTGTTGCACAATCTTCCGAACATACAGATACCCACGATACCAT
CAAGTTGCTGAATCGATATGTCGCTCTTTCCATGGGAGGGGATGACACAATTCCTATCAAATTGAGTGACACCATTTTTTGA
Protein sequenceShow/hide protein sequence
MDKSWMTKNRMSPEYGLGVEMFIENALRQSSRSNVICCPCLRYKTWIWHGESLPVKRNNTNVSSSGKEGEDEDEDIDDVIGMFNAAHDYVNDESHVFEEVLDDVKKPLYS
NCKNFSKISALVCSPAKPKRNVSVAQSSEHTDTHDTIKLLNRYVALSMGGDDTIPIKLSDTIF