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Lag0015348 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015348
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:11090006..11097850
RNA-Seq ExpressionLag0015348
SyntenyLag0015348
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591418.1 Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma subsp. sororia]5.7e-0467.44Show/hide
Query:  YNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNN
        +NA+N A A HHKRKSIVVA DD   HNKLNN P K+I  SNN
Subjt:  YNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNN
KAG7024298.1 Transcription factor bHLH84 [Cucurbita argyrosperma subsp. argyrosperma]8.8e-0569.77Show/hide
Query:  YNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNN
        +NA+N A A HHKRKSIVVA DDD  HNKLNN P K+I  SNN
Subjt:  YNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGCCCGTCGCCTCTCCCAGTCTCCTCTCGTGCTCGTGTTTACCGCCACCGCCGGTGCTTTTCGTGCTTGCTGCCAGTTTAGGTTGCCGCCGGGTAAGTTCTTAAT
CAGCCGAAATTCCCTCGCCATATGCGAAGATGGCAAGAGAAGAAGATGGAGTCTGTTTTCTCGGCTTGTAATGACATTTTGCTGCAAGAGATCAATGGCTTTTGCGGTGA
AGATAGATTTTTATAATGCTAGCAATCCTGCAAATGCATTGCACCACAAAAGGAAGTCCATTGTTGTCGCTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGAC
CCCAATAAGAGAATTTGTGCTTCAAACAATGCAACAATGGAATATGAAGAGGCTGATGAAGTCATTTTCTCTGTTATTGGTCCTCGAAGCATTCACCTTTCTGAAACTGG
GGAAGACATGACCTGCAAGACCAACAAAAACCGCTGCACACCAGCGTGGTGTAGGCCACACCGCCTCCGATGCTTAAGTCAGAAAACGGGAAGAGAGCGTAAAAGAAGAG
AGTCGATCATTCAGTTCGGGGTCCCTTTCTTCAGTGACGAAGAGATGTATAAATACCTGCTCATGCTAGGGTTTCATAGGAGTTCAGAGGCGTTTCGGGAAAAACCAGGC
GGATCCAGGGCGGCTAGAGGCTACAGGGACCAAACGGGACTCGACGAAGAGGGGTATAAATACCTGCTCATGCTAGGTAGTCCCTTACAAGTGGTATCAGAGCCATGCCC
CAGGAGTAGCCATGTTGGGTGGAATCCTCAGGTTCCGAACAAAGAAGTTGTGAGCCTTAATAGTCATGGTGGAGGTCCGTGGTTGAGCTCTGGGGAGGCTCGGGTGGTAC
TTTGCTCGAGGGGAGGATTGTTGGGAGTGCAACCAAAGTCCCACATCGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGCCCGTCGCCTCTCCCAGTCTCCTCTCGTGCTCGTGTTTACCGCCACCGCCGGTGCTTTTCGTGCTTGCTGCCAGTTTAGGTTGCCGCCGGGTAAGTTCTTAAT
CAGCCGAAATTCCCTCGCCATATGCGAAGATGGCAAGAGAAGAAGATGGAGTCTGTTTTCTCGGCTTGTAATGACATTTTGCTGCAAGAGATCAATGGCTTTTGCGGTGA
AGATAGATTTTTATAATGCTAGCAATCCTGCAAATGCATTGCACCACAAAAGGAAGTCCATTGTTGTCGCTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGAC
CCCAATAAGAGAATTTGTGCTTCAAACAATGCAACAATGGAATATGAAGAGGCTGATGAAGTCATTTTCTCTGTTATTGGTCCTCGAAGCATTCACCTTTCTGAAACTGG
GGAAGACATGACCTGCAAGACCAACAAAAACCGCTGCACACCAGCGTGGTGTAGGCCACACCGCCTCCGATGCTTAAGTCAGAAAACGGGAAGAGAGCGTAAAAGAAGAG
AGTCGATCATTCAGTTCGGGGTCCCTTTCTTCAGTGACGAAGAGATGTATAAATACCTGCTCATGCTAGGGTTTCATAGGAGTTCAGAGGCGTTTCGGGAAAAACCAGGC
GGATCCAGGGCGGCTAGAGGCTACAGGGACCAAACGGGACTCGACGAAGAGGGGTATAAATACCTGCTCATGCTAGGTAGTCCCTTACAAGTGGTATCAGAGCCATGCCC
CAGGAGTAGCCATGTTGGGTGGAATCCTCAGGTTCCGAACAAAGAAGTTGTGAGCCTTAATAGTCATGGTGGAGGTCCGTGGTTGAGCTCTGGGGAGGCTCGGGTGGTAC
TTTGCTCGAGGGGAGGATTGTTGGGAGTGCAACCAAAGTCCCACATCGGCTAG
Protein sequenceShow/hide protein sequence
MFARRLSQSPLVLVFTATAGAFRACCQFRLPPGKFLISRNSLAICEDGKRRRWSLFSRLVMTFCCKRSMAFAVKIDFYNASNPANALHHKRKSIVVAGDDDLDHNKLNND
PNKRICASNNATMEYEEADEVIFSVIGPRSIHLSETGEDMTCKTNKNRCTPAWCRPHRLRCLSQKTGRERKRRESIIQFGVPFFSDEEMYKYLLMLGFHRSSEAFREKPG
GSRAARGYRDQTGLDEEGYKYLLMLGSPLQVVSEPCPRSSHVGWNPQVPNKEVVSLNSHGGGPWLSSGEARVVLCSRGGLLGVQPKSHIG