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Lag0015350 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015350
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr12:11163097..11164916
RNA-Seq ExpressionLag0015350
SyntenyLag0015350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]2.1e-1438.1Show/hide
Query:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER
        KFFPP KT +L +EI  FKQND E  YEAWERYK++ RRCPQHG PDWL                                             QWPTER
Subjt:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER

Query:  TPMKKVE-IYELDDSSLLKAQIASLTSALNKLSASKVVKSIVTLAES
        T  KKV  I+EL+  + L AQ+A+L+  ++ L+  ++ +S   +A +
Subjt:  TPMKKVE-IYELDDSSLLKAQIASLTSALNKLSASKVVKSIVTLAES

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]2.1e-1438.1Show/hide
Query:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER
        KFFPP KT +L +EI  FKQND E  YEAWERYK++ RRCPQHG PDWL                                             QWPTER
Subjt:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER

Query:  TPMKKVE-IYELDDSSLLKAQIASLTSALNKLSASKVVKSIVTLAES
        T  KKV  I+EL+  + L AQ+A+L+  ++ L+  ++ +S   +A +
Subjt:  TPMKKVE-IYELDDSSLLKAQIASLTSALNKLSASKVVKSIVTLAES

KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]2.1e-1438.1Show/hide
Query:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER
        KFFPP KT +L +EI  FKQND E  YEAWERYK++ RRCPQHG PDWL                                             QWPTER
Subjt:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER

Query:  TPMKKVE-IYELDDSSLLKAQIASLTSALNKLSASKVVKSIVTLAES
        T  KKV  I++L+  + L AQ+A+L+  ++ L+  ++ +S   LA +
Subjt:  TPMKKVE-IYELDDSSLLKAQIASLTSALNKLSASKVVKSIVTLAES

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.7e-1641.91Show/hide
Query:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWLQ---------------------------------------------WPTER
        K+FPP K+ +L TEI TF+Q +DEQ YEAWERYK++ RRCPQHGYPDWLQ                                             WP ER
Subjt:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWLQ---------------------------------------------WPTER

Query:  TP---MKKVEIYELDDSSLLKAQIASLTSALNKLSA
              K   +YE+D+ + LKAQ+ASLT+AL+KL+A
Subjt:  TP---MKKVEIYELDDSSLLKAQIASLTSALNKLSA

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]2.7e-1730.34Show/hide
Query:  FFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTERT
        FFPP KTT+L TEI +F++ D EQ +E WERYKE+ R+CPQHG  +WL                                             QWP+ER+
Subjt:  FFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTERT

Query:  PMKKVE-IYELDDSSLLKAQIASLTSALNKLS------ASKVVKSIVTL----------------AESHTKKED--------------------------
          KKV  +YE+D+ S LKAQ+ +LT+A++KLS      ++++V +  T                 AE  +  ED                          
Subjt:  PMKKVE-IYELDDSSLLKAQIASLTSALNKLS------ASKVVKSIVTL----------------AESHTKKED--------------------------

Query:  ----------------QKAPPSFASTLGKFPSDIEVNPREQCKVITLWSGTQLKD----------LSDEEKKKEKESKDEDTEGLRQKKP
                        Q AP       GKFPSDIEV PRE CK +TL SG +L++          ++ EE++ ++E   E T  L+  KP
Subjt:  ----------------QKAPPSFASTLGKFPSDIEVNPREQCKVITLWSGTQLKD----------LSDEEKKKEKESKDEDTEGLRQKKP

TrEMBL top hitse value%identityAlignment
A0A1U7Z6K8 uncharacterized protein LOC1045909356.3e-1228.57Show/hide
Query:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER
        K+F P KTTKL  +I TF Q D+E  YE+WER+KE+ R+ P HG P W+                                             QW  E+
Subjt:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER

Query:  TPMKKVEIYELDDSSLLKAQIASLTSALNKLSASKVVKSIVTLAE-------SHTKKEDQKAPPSF----------------------------------
        +  K V IY  D  + L AQ+A+L   L  L  S    S +            H   + Q+APP F                                  
Subjt:  TPMKKVEIYELDDSSLLKAQIASLTSALNKLSASKVVKSIVTLAE-------SHTKKEDQKAPPSF----------------------------------

Query:  -----------ASTLGKFPSDIEVNPREQCKVITLWSGTQL-KDLSDEEKKKEK-----ESKDEDTEGLRQKK
                   A   G  P +IE NPREQ K ITL SG +L K+  D+E+ KE+     E+K+ D E   +KK
Subjt:  -----------ASTLGKFPSDIEVNPREQCKVITLWSGTQL-KDLSDEEKKKEK-----ESKDEDTEGLRQKK

A0A2I4G4Q3 uncharacterized protein LOC1090047125.1e-1438.57Show/hide
Query:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER
        KFFPP KTT+L +EI  FKQND E  YEAWE YK++ RRCPQHG PDWL                                             QWP ER
Subjt:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER

Query:  TPMKKV-EIYELDDSSLLKAQIASLTSALNKLSASKVVKS
        T  KKV  I+EL+  + L AQ+A+L+  ++ L+  ++ +S
Subjt:  TPMKKV-EIYELDDSSLLKAQIASLTSALNKLSASKVVKS

A0A3S3N117 Retrotrans_gag domain-containing protein1.8e-1133.58Show/hide
Query:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER
        KFFPPTKT K+  +I TF QN+ E  YEAWERYKE+ R+CP HG P W+                                             QWP++ 
Subjt:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER

Query:  TPMKKVE-IYELDDSSLLKAQIASLTSALNKLSASKV
           KK++ ++ELD  S L AQ+A+L+  +  +    V
Subjt:  TPMKKVE-IYELDDSSLLKAQIASLTSALNKLSASKV

A0A6J1DU19 uncharacterized protein LOC1110243611.3e-1730.34Show/hide
Query:  FFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTERT
        FFPP KTT+L TEI +F++ D EQ +E WERYKE+ R+CPQHG  +WL                                             QWP+ER+
Subjt:  FFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTERT

Query:  PMKKVE-IYELDDSSLLKAQIASLTSALNKLS------ASKVVKSIVTL----------------AESHTKKED--------------------------
          KKV  +YE+D+ S LKAQ+ +LT+A++KLS      ++++V +  T                 AE  +  ED                          
Subjt:  PMKKVE-IYELDDSSLLKAQIASLTSALNKLS------ASKVVKSIVTL----------------AESHTKKED--------------------------

Query:  ----------------QKAPPSFASTLGKFPSDIEVNPREQCKVITLWSGTQLKD----------LSDEEKKKEKESKDEDTEGLRQKKP
                        Q AP       GKFPSDIEV PRE CK +TL SG +L++          ++ EE++ ++E   E T  L+  KP
Subjt:  ----------------QKAPPSFASTLGKFPSDIEVNPREQCKVITLWSGTQLKD----------LSDEEKKKEKESKDEDTEGLRQKKP

A0A6P9E7J9 uncharacterized protein LOC1183442381.4e-1137.86Show/hide
Query:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER
        KFFPP KT +L +EI  FKQND E  YEA ERYK++ R CPQHG PDWL                                             QWPTER
Subjt:  KFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWL---------------------------------------------QWPTER

Query:  TPMKK-VEIYELDDSSLLKAQIASLTSALNKLSASKVVKS
        T  KK V I+EL+  + L AQ A+L+  ++ L+  ++ +S
Subjt:  TPMKK-VEIYELDDSSLLKAQIASLTSALNKLSASKVVKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCGATTGCTCGTTCAAAGGGAACCCTCTGAGGATCCTCATTCCCACCTTCGATCATTTTTGGAGATATGTGGGACACTCAGACGTTGCTTATAAATTTTTTCC
ACCTACTAAAACCACCAAGCTCTGCACGGAGATTGAGACGTTCAAGCAGAACGATGACGAGCAGTTTTACGAGGCGTGGGAGCGGTATAAAGAAATGCGAAGGAGATGCC
CTCAGCACGGTTACCCAGACTGGCTCCAGTGGCCTACGGAGAGGACCCCGATGAAAAAGGTCGAAATTTATGAGTTGGATGACTCAAGTTTGTTGAAAGCGCAAATTGCT
TCCTTGACCAGTGCCCTGAATAAGCTTTCAGCTTCTAAAGTGGTTAAGTCAATTGTCACTCTAGCTGAAAGCCACACAAAGAAGGAAGACCAGAAGGCACCCCCAAGTTT
TGCATCCACATTAGGGAAGTTTCCAAGCGACATAGAAGTTAACCCGAGAGAGCAATGTAAGGTTATCACGCTCTGGAGTGGAACGCAGCTGAAGGATCTATCGGATGAAG
AAAAGAAGAAGGAGAAAGAGAGCAAGGATGAAGACACGGAAGGGCTGAGGCAGAAAAAACCTCCAAGGACAGGGTACCTTGCAACCACCATGATCGAGGATCTCACATCA
GCCCGCCCAAGAGGAGGGGCGAATGTCCGACCTTCGACTACAGGGAGTTACCTTTTCCTTAGCGCTTTAAAAATTGACGATGAGTTAGATTTAGAGTTAGAATTAGAAGG
TCAGCCTGATATGGGATCCGATCCTGATGAGTTCTTTAATCATGATATGTTTGAAGGTGAAGAAATGTTGGAAGATTTTGAATTACCTGTTTTGTTGGACTACAATGAGC
AAGATGGAAATGATAGTGTCATACAGTCTAATGTAGATAGTGGGTCTCATGTAGATATGCCTGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCGATTGCTCGTTCAAAGGGAACCCTCTGAGGATCCTCATTCCCACCTTCGATCATTTTTGGAGATATGTGGGACACTCAGACGTTGCTTATAAATTTTTTCC
ACCTACTAAAACCACCAAGCTCTGCACGGAGATTGAGACGTTCAAGCAGAACGATGACGAGCAGTTTTACGAGGCGTGGGAGCGGTATAAAGAAATGCGAAGGAGATGCC
CTCAGCACGGTTACCCAGACTGGCTCCAGTGGCCTACGGAGAGGACCCCGATGAAAAAGGTCGAAATTTATGAGTTGGATGACTCAAGTTTGTTGAAAGCGCAAATTGCT
TCCTTGACCAGTGCCCTGAATAAGCTTTCAGCTTCTAAAGTGGTTAAGTCAATTGTCACTCTAGCTGAAAGCCACACAAAGAAGGAAGACCAGAAGGCACCCCCAAGTTT
TGCATCCACATTAGGGAAGTTTCCAAGCGACATAGAAGTTAACCCGAGAGAGCAATGTAAGGTTATCACGCTCTGGAGTGGAACGCAGCTGAAGGATCTATCGGATGAAG
AAAAGAAGAAGGAGAAAGAGAGCAAGGATGAAGACACGGAAGGGCTGAGGCAGAAAAAACCTCCAAGGACAGGGTACCTTGCAACCACCATGATCGAGGATCTCACATCA
GCCCGCCCAAGAGGAGGGGCGAATGTCCGACCTTCGACTACAGGGAGTTACCTTTTCCTTAGCGCTTTAAAAATTGACGATGAGTTAGATTTAGAGTTAGAATTAGAAGG
TCAGCCTGATATGGGATCCGATCCTGATGAGTTCTTTAATCATGATATGTTTGAAGGTGAAGAAATGTTGGAAGATTTTGAATTACCTGTTTTGTTGGACTACAATGAGC
AAGATGGAAATGATAGTGTCATACAGTCTAATGTAGATAGTGGGTCTCATGTAGATATGCCTGTATAG
Protein sequenceShow/hide protein sequence
MESDCSFKGNPLRILIPTFDHFWRYVGHSDVAYKFFPPTKTTKLCTEIETFKQNDDEQFYEAWERYKEMRRRCPQHGYPDWLQWPTERTPMKKVEIYELDDSSLLKAQIA
SLTSALNKLSASKVVKSIVTLAESHTKKEDQKAPPSFASTLGKFPSDIEVNPREQCKVITLWSGTQLKDLSDEEKKKEKESKDEDTEGLRQKKPPRTGYLATTMIEDLTS
ARPRGGANVRPSTTGSYLFLSALKIDDELDLELELEGQPDMGSDPDEFFNHDMFEGEEMLEDFELPVLLDYNEQDGNDSVIQSNVDSGSHVDMPV