; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015352 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015352
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr12:11256703..11257815
RNA-Seq ExpressionLag0015352
SyntenyLag0015352
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
THJ37534.1 hypothetical protein E7Y31_21195, partial [Frankia symbiont of Alnus alnobetula]5.9e-1844.55Show/hide
Query:  AKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQ
        A   +P KFK+   P Y   +DPV+HLD +R+ M  HR  E+  CRAF LTL+G AR W+ KLP  SI  F++L R+F+TQF+  R R+KP  +L ++ Q
Subjt:  AKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQ

Query:  RPGGKLERIY
         P   L   +
Subjt:  RPGGKLERIY

WP_161983137.1 hypothetical protein, partial [Frankia symbiont of Alnus alnobetula]5.9e-1844.55Show/hide
Query:  AKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQ
        A   +P KFK+   P Y   +DPV+HLD +R+ M  HR  E+  CRAF LTL+G AR W+ KLP  SI  F++L R+F+TQF+  R R+KP  +L ++ Q
Subjt:  AKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQ

Query:  RPGGKLERIY
         P   L   +
Subjt:  RPGGKLERIY

XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]2.6e-1849Show/hide
Query:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR
        K +VP KFKL    +YD   DP+ HLD Y  W   +  +E  +CR FS TLTG  R W+ +L RKSI SFKEL+R FVTQF G  +R +P   L T+ Q+
Subjt:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.1e-1953Show/hide
Query:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR
        K +VP KFKL T  Q+D   D V HLD YR WM  +  SE  KCR FS TL+G AR W+ +L R SI SFK L++ FVTQF+G R R +P   L T+ QR
Subjt:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.2e-2043.75Show/hide
Query:  DAPDETSKVGSHKRVEAEAKIRAEIDRAEVEAKVKVVAEAAAKAKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIAR
        D P+ + K  SHK  E    +   +D+A+     +++ E       +VP KFKL T  Q+D   DPV HLD YR WM  +  SE  +CR FS TL G AR
Subjt:  DAPDETSKVGSHKRVEAEAKIRAEIDRAEVEAKVKVVAEAAAKAKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIAR

Query:  QWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR
         W+ +L R SI SFK L+R FVTQF+G R R +P   L T+ QR
Subjt:  QWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR

TrEMBL top hitse value%identityAlignment
A0A4S5BWZ5 Retrotrans_gag domain-containing protein (Fragment)2.8e-1844.55Show/hide
Query:  AKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQ
        A   +P KFK+   P Y   +DPV+HLD +R+ M  HR  E+  CRAF LTL+G AR W+ KLP  SI  F++L R+F+TQF+  R R+KP  +L ++ Q
Subjt:  AKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQ

Query:  RPGGKLERIY
         P   L   +
Subjt:  RPGGKLERIY

A0A6J1D3B7 uncharacterized protein LOC1110166191.3e-1849Show/hide
Query:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR
        K +VP KFKL    +YD   DP+ HLD Y  W   +  +E  +CR FS TLTG  R W+ +L RKSI SFKEL+R FVTQF G  +R +P   L T+ Q+
Subjt:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR

A0A6J1D7D2 uncharacterized protein LOC1110183075.2e-2053Show/hide
Query:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR
        K +VP KFKL T  Q+D   D V HLD YR WM  +  SE  KCR FS TL+G AR W+ +L R SI SFK L++ FVTQF+G R R +P   L T+ QR
Subjt:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR

A0A6J1DWY0 uncharacterized protein LOC1110252934.0e-2043.75Show/hide
Query:  DAPDETSKVGSHKRVEAEAKIRAEIDRAEVEAKVKVVAEAAAKAKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIAR
        D P+ + K  SHK  E    +   +D+A+     +++ E       +VP KFKL T  Q+D   DPV HLD YR WM  +  SE  +CR FS TL G AR
Subjt:  DAPDETSKVGSHKRVEAEAKIRAEIDRAEVEAKVKVVAEAAAKAKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIAR

Query:  QWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR
         W+ +L R SI SFK L+R FVTQF+G R R +P   L T+ QR
Subjt:  QWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR

A0A6J1DZ49 uncharacterized protein LOC1110248516.3e-1848Show/hide
Query:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR
        K +   KFKL    +YD   DP+ HLD YR W   +   E  +CR FS TLTG AR W+ +L R SI SFKEL+  FVTQF+G R + KP   L T+ Q+
Subjt:  KAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKELSRIFVTQFLGARDRRKPQFNLFTVIQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGCAAGCACCACACCGTTGTGCAATGTTTACTTCTTGTTTGCAGGTCATGTCTTCCCCAGATTCAAACAAATTCACTGTTGGTGTCATGTGAAGGTCAGACTAC
TAGTAGAAGAATGGAGAAGGAGAATCCAGTGGGTGATGCAGGTCCTCGGCCTCGGGCTTATGCCCAGGAGATGGAGATAGCAACTCTCAAGGGAAGGGTAAACGAGATGG
GGCAGCGTTTGGCCGAGATTCTGAACATCCTGAAACAGCCAAATCCCAACATGAAGTACCAAAAGAGCCTCGTGGAGCGTAAGGGCGCACTTGATGCTCCAGATGAAACC
AGTAAAGTGGGTTCACACAAGAGGGTTGAGGCCGAGGCCAAAATTCGAGCAGAGATCGATCGGGCGGAGGTTGAGGCTAAGGTGAAGGTTGTGGCCGAAGCCGCTGCAAA
AGCTAAGGCAGAAGTTCCGCATAAGTTCAAGTTACTGACTTCCCCACAATATGATAGGAAGAAAGATCCAGTTCAACATTTGGACACCTACCGATCTTGGATGCAGTTTC
ATAGGGCTTCCGAGGTGACAAAGTGTCGTGCTTTTTCTCTAACCTTGACGGGAATAGCACGACAGTGGTACAACAAATTGCCACGGAAGTCCATCGGGTCTTTCAAGGAG
TTATCACGCATTTTCGTCACACAGTTTTTAGGGGCGAGAGATCGAAGAAAACCACAGTTCAACCTATTTACCGTTATACAGAGACCAGGGGGAAAGCTTGAACGAATATA
TCACACGCTTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGCAAGCACCACACCGTTGTGCAATGTTTACTTCTTGTTTGCAGGTCATGTCTTCCCCAGATTCAAACAAATTCACTGTTGGTGTCATGTGAAGGTCAGACTAC
TAGTAGAAGAATGGAGAAGGAGAATCCAGTGGGTGATGCAGGTCCTCGGCCTCGGGCTTATGCCCAGGAGATGGAGATAGCAACTCTCAAGGGAAGGGTAAACGAGATGG
GGCAGCGTTTGGCCGAGATTCTGAACATCCTGAAACAGCCAAATCCCAACATGAAGTACCAAAAGAGCCTCGTGGAGCGTAAGGGCGCACTTGATGCTCCAGATGAAACC
AGTAAAGTGGGTTCACACAAGAGGGTTGAGGCCGAGGCCAAAATTCGAGCAGAGATCGATCGGGCGGAGGTTGAGGCTAAGGTGAAGGTTGTGGCCGAAGCCGCTGCAAA
AGCTAAGGCAGAAGTTCCGCATAAGTTCAAGTTACTGACTTCCCCACAATATGATAGGAAGAAAGATCCAGTTCAACATTTGGACACCTACCGATCTTGGATGCAGTTTC
ATAGGGCTTCCGAGGTGACAAAGTGTCGTGCTTTTTCTCTAACCTTGACGGGAATAGCACGACAGTGGTACAACAAATTGCCACGGAAGTCCATCGGGTCTTTCAAGGAG
TTATCACGCATTTTCGTCACACAGTTTTTAGGGGCGAGAGATCGAAGAAAACCACAGTTCAACCTATTTACCGTTATACAGAGACCAGGGGGAAAGCTTGAACGAATATA
TCACACGCTTAAGTAA
Protein sequenceShow/hide protein sequence
MCGKHHTVVQCLLLVCRSCLPQIQTNSLLVSCEGQTTSRRMEKENPVGDAGPRPRAYAQEMEIATLKGRVNEMGQRLAEILNILKQPNPNMKYQKSLVERKGALDAPDET
SKVGSHKRVEAEAKIRAEIDRAEVEAKVKVVAEAAAKAKAEVPHKFKLLTSPQYDRKKDPVQHLDTYRSWMQFHRASEVTKCRAFSLTLTGIARQWYNKLPRKSIGSFKE
LSRIFVTQFLGARDRRKPQFNLFTVIQRPGGKLERIYHTLK