; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015365 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015365
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:11580496..11582046
RNA-Seq ExpressionLag0015365
SyntenyLag0015365
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.4e-6330.43Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE
        M ++K RGGLGFRDL  FN+A++AK  WR+++ P+SL+A+++K +YY   +F   K G   S +W+SILWG  + + G  W+IG+ K+V + +D  +   
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE

Query:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNS
         ++ P+  KT      V +LI     W+ D +   F   D   IL +   S  + DE++W  D KG +SVK  Y LA   +   E   S+S  S R+W  
Subjt:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNS

Query:  LWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIAS-DGCKD-IESLMELWEKVIYTLSREE
         W ++   ++KI +WRA  + LPT  N+ KR      +C   + + E   H+L  CK  R IW  L P ++  S D  +D   ++ E+W +     S  E
Subjt:  LWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIAS-DGCKD-IESLMELWEKVIYTLSREE

Query:  LSRVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLI
           +      IW ARN+   +G + +S  + +  +  ++      K      + +       WK P  +  K+N DAA        G+G  + D++  ++
Subjt:  LSRVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLI

Query:  GVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLA
         VG K+    + + + E++AI  GL+    I ++        + +ESD  EVV LLN+      EI +++ +  + +++ K   FS  PR C+  AH LA
Subjt:  GVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLA

Query:  RVAAVN
        + A  N
Subjt:  RVAAVN

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]3.0e-6631.4Show/hide
Query:  SKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNEGSW
        SK RGG+GFRDLS FN+A++AK  WRI++ P SLVA++LK +Y+    F+    G + S VW+SI+WGR +   G  W+IGN + V +  +  +    ++
Subjt:  SKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNEGSW

Query:  IPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNSLWN
         P+   +      V ELI E + W+ED+I   F P DA  I+ +P     K D++IW  D KG +SVK  Y +A ++   E+ S S+    Q +W  +W 
Subjt:  IPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNSLWN

Query:  MNAWLRMKITVWR-ANDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCK--DIESLMELWEKVIYTLSREELSR
        +    ++KI +WR A+D LPT  N+ K+ +    +C       E   H L  C + R IW     NL     G    DI  +++ W +     ++ E + 
Subjt:  MNAWLRMKITVWR-ANDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCK--DIESLMELWEKVIYTLSREELSR

Query:  VGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLIGVG
        V  ++ AIW+ARN+   +G +    +++++ E  +E+     +      +  N      W  P     K+N DAA    + + G+G  + DSD +     
Subjt:  VGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLIGVG

Query:  CKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLARVA
         K +     + + E+ A++ GL+       A K+  T  I  ESDS+EV++L+N KS  L EI ++I + ++  ++ +       PR C++ AH LA++A
Subjt:  CKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLARVA

XP_024190234.1 uncharacterized protein LOC112194221 [Rosa chinensis]7.4e-5728.06Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE
        +C+SK +GGLGFRDL  FN+A+LAK  WR++  P+SLV ++L+GKY+   ++   ++   AS++W S++WGRDL  +G  W++G    + +  D  L   
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE

Query:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEE----VSGSDSTTSQR
         ++ P+   T     +V EL+     W E +IR  F P +  TIL +P  +  ++D I+W     G ++VK    LA +L    E     S S +    +
Subjt:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEE----VSGSDSTTSQR

Query:  MWNSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSR
        +W++LW +    ++K+ +WRA    LP   N+ +R + +++LCC    + E + H +W C   + +W     N +          S ++L+  V+ T S+
Subjt:  MWNSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSR

Query:  EELSRVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENI-SVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDR
        EE+     I   +W++RN+ KH+G   ES  I+    + + N    +      +  A        W+ P     K+N DAA         +G  + D + 
Subjt:  EELSRVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENI-SVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDR

Query:  SLIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAH
         L   G K +  +  I  +E+ A+  GL          +    + + +ESDS  V++ LN    DL     V+++ + LA   +   + K  R  +  AH
Subjt:  SLIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAH

Query:  LLARVA
         +A+ A
Subjt:  LLARVA

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]2.3e-5829.54Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE
        + ++K RGGLGFR+ S FN+A++AK +WR+++ P+SLV+++L+ +Y+   SFL  K+G  AS +W+SI+WGR + + G  W+IGN K++ I  D  L   
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE

Query:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNS
         ++ P+   +      V +LI  +  W E  +R  F   D A IL +P  +    DE++W  D +G +SVK  Y LA  L SK   S S +  S + W++
Subjt:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNS

Query:  LWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREELS
        LW +    ++KI +WRA N+ LP+  N+ KR +     C   +   E   H L  CK  R IW     +        +DI S ++   K    L + +L 
Subjt:  LWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREELS

Query:  RVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLIGV
         +  +  + W ARN+    G         +  E  +       K  Q   S         W  P  + +K+N DAA+   +   G+G  + DS+  ++  
Subjt:  RVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLIGV

Query:  GCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLARV
        G  + +      + E++A+  GL+         ++     + IESD +EVV L+N+      EI + I   +   +  +    +  PR C+  AH LA++
Subjt:  GCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLARV

Query:  A
        A
Subjt:  A

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]2.6e-6231.09Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE
        M ++KC+GG+GFRD + FN+A+LAK  WRI + PDSLVA++L+ +Y+   +FL  K G   S +W+SILWGR +   G  W+IGN + V+I +   +   
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE

Query:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNS
         ++ P+   T      V ELI+    W E++I   F   DA  I  +P     + DE+IW     G ++VK  Y  A ++      S S+S  S+  WN 
Subjt:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNS

Query:  LWNMNAWLRMKITVWR-ANDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREELS
        +W++    +++I VWR A + LP+  N+ KR I     C   +   EN  H L  CK  + +W   +  + I +   +DI SL+   +++    S  ++ 
Subjt:  LWNMNAWLRMKITVWR-ANDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREELS

Query:  RVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSA----ENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRS
            ++ A W ARNQ   KG R     +++  E  +E      K++QPS+      +   +   W  P     K+N DAA     NL G+G  + D +  
Subjt:  RVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSA----ENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRS

Query:  LIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHL
        +     K    H  +   E++A++ GL+         K    K + +ESDS EVV+L+N++     EI +V+ E +KL       S     R C+ +AH 
Subjt:  LIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHL

Query:  LARVA
        L ++A
Subjt:  LARVA

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein8.5e-6731.82Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE
        +C++K RGGLGFRD++ FN+A++AK SWRIIK P+SL+AKIL+ KY+ G  FL+ K G + S VW+SI+WGR +  NG  W+IG   +V I +   +   
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE

Query:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNS
         ++ P+   T      V ELI EN+ WKE +I+  F   DA  I  +      K D+I+W  D KG +SVK  Y +A ++      S S S   Q  WN 
Subjt:  GSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNS

Query:  LWNMNAWLRMKITVWR-ANDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREELS
        +W++    ++KI +W+ A + LPT  N+ +R +    +C   + K E+  H +  CK  + +W  L P   +      D + L+ + ++++   S++EL 
Subjt:  LWNMNAWLRMKITVWR-ANDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREELS

Query:  RVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENIS-VEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLIG
         +  +    W  RN    +  R +    ++  E  +E+ + V M K+Q ++ A        W  P   H+K N DAA     N  G+G  + D   ++I 
Subjt:  RVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENIS-VEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLIG

Query:  VGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEE-EEKLARDAKVTSFSKCPRRCSFLAHLLA
                H  +   E+ A+  GL+    ++ A  S    P+ +E+D  +VV+ + H      EI + I E ++KL     +    K  R C+ +AH LA
Subjt:  VGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEE-EEKLARDAKVTSFSKCPRRCSFLAHLLA

Query:  RVAAVN
        ++A VN
Subjt:  RVAAVN

A0A2N9EMZ0 Reverse transcriptase domain-containing protein8.0e-5728.43Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE
        +C+SK  GG+G RDL  FN+A+LAK  WR++ +P SL +K+ K KY+   S L+ +   + S  WKSI+  RDL   G +W++G    + I +D  L + 
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE

Query:  GS-WIPLGVKTHLKGRRVVELI-SENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMW
         S  I       +    V  LI SE   WK ++++  F P +A+ IL +P       D ++W+    G ++V+  YHL      + E S SD+T   ++W
Subjt:  GS-WIPLGVKTHLKGRRVVELI-SENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMW

Query:  NSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREE
        +++W+++   +++  +WRA +++LPT  N+  R I +   C    ++ E++ H LW+CK+I+P+W ++     +           ++L  +   TLS  E
Subjt:  NSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREE

Query:  LSRVGQIILAIWEARNQIKHKGSRPESSQII-SDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSL
        L         IW  RN+++ +      SQ+I   ++  +E  + +    QPS    NH   T+WK P    +K+N+D A F   N  G+G  + +    +
Subjt:  LSRVGQIILAIWEARNQIKHKGSRPESSQII-SDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSL

Query:  IGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLL
        +G     I     ++ +E+ A    ++         K      I++E DS  +V  L  K+        VIE+ ++ A++ +   F    R  + +AHLL
Subjt:  IGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLL

Query:  ARVAAVNGDF
        A+ A +N  F
Subjt:  ARVAAVNGDF

A0A2N9GI95 Reverse transcriptase domain-containing protein6.6e-5928.94Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQD---PCL
        +C+SK  GG+GFR+L  FN+A+LAK  WR++ +P SL  K+ K KY+   S L+      +S  WKSI+  RDL + G  W++GN   + I  D   P  
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQD---PCL

Query:  SNEGSWIPLGVKTHLKGRRVVELIS-ENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQR
         N+    P    ++L    V  LI  ++  WKE++IR+ F P DA  I+ +P  S  ++D ++W     G ++V+  YHL  Q  ++ +    D+T    
Subjt:  SNEGSWIPLGVKTHLKGRRVVELIS-ENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQR

Query:  MWNSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSR
        +W+S+W++    + +  +WRA +++LPT  N+  R I     C    ++ E + H LW CK I+ +W TL     +      D    M+LW +    LS 
Subjt:  MWNSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSR

Query:  EELSRVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRS
         EL     +   IW  RN+++      + ++I+   ++ I   + E  +   S S     +   W+ P    +K+N+D A F  +N  G+G  + ++  +
Subjt:  EELSRVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRS

Query:  LIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHL
        ++G  C+ +     I+ +E+ A +  ++         K      IE+E DS  VV+ L            +IE+ + +AR      F    R  + LAHL
Subjt:  LIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHL

Query:  LARVAAVN
        LA+ A +N
Subjt:  LARVAAVN

A0A2N9GY38 Reverse transcriptase domain-containing protein4.7e-5728.26Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCL-SN
        +C+SK  GG+GFR+L  FN+A+LAK  WR++ +P SL  K+ K KY+   S L+      +S  WKSI+  RDL + G  W++GN   + I  D  L S+
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCL-SN

Query:  EGSWIPLGVKTHLKGRRVVELIS-ENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMW
            I           +V  LI  ++  WKE +IR+ F P DA TI+ +P  S  ++D ++W     G ++V+  YHL     ++ +   SD+T    +W
Subjt:  EGSWIPLGVKTHLKGRRVVELIS-ENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMW

Query:  NSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREE
        +S+W++    + +  +WR+ +++LPT  N+  R I     C    ++ E + H LW CK I+ +W TL     +      D    M+LW +    LS  E
Subjt:  NSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREE

Query:  LSRVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLI
        L     +   IW  RN+++      + ++I+   ++ I   + E      S       +   W+ P    +K+N+D A F  +N  G+G  + ++  +++
Subjt:  LSRVGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLI

Query:  GVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLA
        G  C+ +     I+ +E+ A +  ++         K      I++E DS  VV+ L            +IE+ + + R      F    R  + LAHLLA
Subjt:  GVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLA

Query:  RVAAVN
        + A +N
Subjt:  RVAAVN

A0A2N9HYE3 Reverse transcriptase domain-containing protein8.0e-5728.43Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE
        +C+SK  GG+G RDL  FN+A+LAK  WR++ +P SL +K+ K KY+   S L+ +   + S  WKSI+  RDL   G +W++G    + I +D  L + 
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNE

Query:  GS-WIPLGVKTHLKGRRVVELI-SENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMW
         S  I       +    V  LI SE   WK ++++  F P +A+ IL +P       D ++W+    G ++V+  YHL      + E S SD+T   ++W
Subjt:  GS-WIPLGVKTHLKGRRVVELI-SENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMW

Query:  NSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREE
        +++W+++   +++  +WRA +++LPT  N+  R I +   C    ++ E++ H LW+CK+I+P+W ++     +           ++L  +   TLS  E
Subjt:  NSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREE

Query:  LSRVGQIILAIWEARNQIKHKGSRPESSQII-SDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSL
        L         IW  RN+++ +      SQ+I   ++  +E  + +    QPS    NH   T+WK P    +K+N+D A F   N  G+G  + +    +
Subjt:  LSRVGQIILAIWEARNQIKHKGSRPESSQII-SDIEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSL

Query:  IGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLL
        +G     I     ++ +E+ A    ++         K      I++E DS  +V  L  K+        VIE+ ++ A++ +   F    R  + +AHLL
Subjt:  IGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLL

Query:  ARVAAVNGDF
        A+ A +N  F
Subjt:  ARVAAVNGDF

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657507.8e-1725.7Show/hide
Query:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGE----SFLKPKSGDRASMVWKSILWG-RDLFENGYIWKIGNRKQV------
        +C  K  GGLG R     N+A+++K+ WR+++  +SL   +L+ KY+ GE     +L PK     S  W+SI  G RD+  +G  W  G+ +Q+      
Subjt:  MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGE----SFLKPKSGDRASMVWKSILWG-RDLFENGYIWKIGNRKQV------

Query:  YIDQDPCLSNEGSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDA-----ATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKE
        ++   P L  +    P    T +      +L      W    I D +  ++      A +LD+        D + W+    G FSV+ AY +     + +
Subjt:  YIDQDPCLSNEGSWIPLGVKTHLKGRRVVELISENEYWKEDIIRDAFFPSDA-----ATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKE

Query:  EVSGSDSTTSQRMWNSLWNMNAWLRMKITVWR-ANDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIP
        EV   +  +    +N LW +    R+K  +W   N A+ T     +R ++++N+C   +   E+  H+L  C     IW  ++P
Subjt:  EVSGSDSTTSQRMWNSLWNMNAWLRMKITVWR-ANDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIP

P93295 Uncharacterized mitochondrial protein AtMg003103.6e-1441.67Show/hide
Query:  MCRSK-CRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGN--RKQVYIDQ
        +C+SK   GGLGFRDL  FN+A+LAK S+RII  P +L++++L+ +Y+   S ++   G R S  W+SI+ GR+L   G +  IG+    +V++D+
Subjt:  MCRSK-CRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGN--RKQVYIDQ

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein8.0e-3323.11Show/hide
Query:  KCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNEGSWI
        K  GG+GF+D+  FN A+L K  WR++  P+SL+AK+ K +Y+     L    G R S VWKSI   +++   G    +GN + + I +   L ++ +  
Subjt:  KCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNEGSWI

Query:  PL-----------GVKTHLKGRRVVELISEN-EYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDST
         L            V + LK   V +LI E+   W++D+I   F   +   I ++        D   W+    G ++VK  Y +  Q+ +K       S 
Subjt:  PL-----------GVKTHLKGRRVVELISEN-EYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDST

Query:  TS-QRMWNSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVI
         S   ++  +W      +++  +W+  +++LP  G +  R ++  + C    S  E   HLL++C   R  W+     + +  +    I   +  W   +
Subjt:  TS-QRMWNSLWNMNAWLRMKITVWRA-NDALPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVI

Query:  YTLSR-----EELSR-VGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAE-NHPSHTSWKTPVVSHWKMNFDAAWFGASNLG
        + L       E+ S+ V  ++  +W+ RN++  +G    + +++   E  +E   +  +     +  + N  S   W+ P     K N DA W   +   
Subjt:  YTLSR-----EELSR-VGQIILAIWEARNQIKHKGSRPESSQIISDIEKRIENISVEMKKLQPSSSAE-NHPSHTSWKTPVVSHWKMNFDAAWFGASNLG

Query:  GIGWALCDSDRSLIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFS
        GIGW L +    +  +G + + K   +   E +A++  + SL+         +   +  ESDS  ++ +LN+  +    +   I++ ++L        F 
Subjt:  GIGWALCDSDRSLIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPIEIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFS

Query:  KCPRRCSFLAHLLAR
          PR  + LA  +AR
Subjt:  KCPRRCSFLAHLLAR

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.6e-1541.67Show/hide
Query:  MCRSK-CRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGN--RKQVYIDQ
        +C+SK   GGLGFRDL  FN+A+LAK S+RII  P +L++++L+ +Y+   S ++   G R S  W+SI+ GR+L   G +  IG+    +V++D+
Subjt:  MCRSK-CRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGN--RKQVYIDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCGAAGCAAATGCAGAGGTGGTCTTGGATTTAGGGATTTATCTCTCTTTAATAAGGCCATGCTCGCTAAGATCAGCTGGAGGATCATTAAGTCTCCCGATAGCTT
AGTGGCTAAAATTCTTAAAGGAAAATATTACAGTGGAGAATCTTTTTTAAAACCTAAGAGCGGCGACAGGGCTTCCATGGTTTGGAAAAGTATTCTGTGGGGTAGGGATT
TGTTCGAGAATGGGTACATATGGAAGATTGGTAACAGGAAGCAAGTGTATATTGATCAAGATCCATGTCTTTCTAATGAAGGCTCTTGGATCCCTTTGGGAGTGAAAACC
CACCTTAAAGGTAGACGAGTGGTCGAGCTTATCAGTGAGAACGAGTACTGGAAGGAGGATATCATTAGGGATGCTTTCTTTCCTAGTGATGCTGCGACCATTCTGGATAT
GCCTAGAAGATCAGTATCTAAGAACGATGAGATTATCTGGGAAAAGGATCCAAAAGGATTGTTCTCCGTTAAAGGAGCCTATCACTTAGCGTGCCAATTGGATTCCAAAG
AAGAAGTTTCTGGTTCGGACTCAACAACCTCTCAAAGGATGTGGAATTCTTTATGGAATATGAATGCGTGGCTAAGAATGAAGATCACAGTTTGGAGAGCGAACGATGCT
CTTCCCACATTTGGAAACATTAAGAAAAGAGGAATTAATTCGACCAATCTTTGTTGTTTTTATAGGTCTAAAGCAGAGAATTCGAAGCACCTTTTATGGAGATGCAAAAA
GATAAGGCCTATTTGGAGCACTCTGATTCCTAATCTTATAATTGCTTCTGATGGTTGCAAGGATATCGAAAGCCTTATGGAGCTTTGGGAGAAGGTTATTTATACTCTAA
GTAGAGAGGAGTTGTCCAGAGTAGGGCAGATCATTTTGGCGATTTGGGAGGCTAGAAACCAAATTAAGCACAAAGGGAGCAGACCAGAATCATCTCAGATCATCAGTGAT
ATAGAGAAAAGGATAGAGAACATATCTGTGGAAATGAAGAAGCTGCAACCATCTAGCTCAGCGGAGAACCATCCTAGTCACACCAGTTGGAAGACGCCGGTGGTCAGTCA
TTGGAAGATGAATTTCGATGCGGCGTGGTTCGGAGCCTCAAATTTAGGGGGTATTGGTTGGGCCCTTTGTGACTCGGACAGGTCTCTGATTGGAGTGGGATGCAAGGAAA
TTGTTAAACACGATCCTATTAAGGTGCTTGAATCAAAAGCCATCAAGTTAGGGCTAGAAAGTCTTACCGGTATCCTCAACGCTGGCAAGAGTTGCAGGACAAAACCGATC
GAAATTGAATCAGACTCGATCGAGGTGGTGAATCTATTAAACCACAAATCGCAGGACCTTTTGGAAATTTCCTTCGTCATTGAGGAAGAGGAAAAGCTAGCGAGGGATGC
GAAGGTTACCTCCTTCTCGAAGTGTCCAAGGAGGTGTAGTTTTTTGGCGCATCTGCTTGCCCGTGTAGCAGCGGTCAACGGGGACTTCTTGTTTGTGAGTCCCCTTTTTT
CTTTTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTCGAAGCAAATGCAGAGGTGGTCTTGGATTTAGGGATTTATCTCTCTTTAATAAGGCCATGCTCGCTAAGATCAGCTGGAGGATCATTAAGTCTCCCGATAGCTT
AGTGGCTAAAATTCTTAAAGGAAAATATTACAGTGGAGAATCTTTTTTAAAACCTAAGAGCGGCGACAGGGCTTCCATGGTTTGGAAAAGTATTCTGTGGGGTAGGGATT
TGTTCGAGAATGGGTACATATGGAAGATTGGTAACAGGAAGCAAGTGTATATTGATCAAGATCCATGTCTTTCTAATGAAGGCTCTTGGATCCCTTTGGGAGTGAAAACC
CACCTTAAAGGTAGACGAGTGGTCGAGCTTATCAGTGAGAACGAGTACTGGAAGGAGGATATCATTAGGGATGCTTTCTTTCCTAGTGATGCTGCGACCATTCTGGATAT
GCCTAGAAGATCAGTATCTAAGAACGATGAGATTATCTGGGAAAAGGATCCAAAAGGATTGTTCTCCGTTAAAGGAGCCTATCACTTAGCGTGCCAATTGGATTCCAAAG
AAGAAGTTTCTGGTTCGGACTCAACAACCTCTCAAAGGATGTGGAATTCTTTATGGAATATGAATGCGTGGCTAAGAATGAAGATCACAGTTTGGAGAGCGAACGATGCT
CTTCCCACATTTGGAAACATTAAGAAAAGAGGAATTAATTCGACCAATCTTTGTTGTTTTTATAGGTCTAAAGCAGAGAATTCGAAGCACCTTTTATGGAGATGCAAAAA
GATAAGGCCTATTTGGAGCACTCTGATTCCTAATCTTATAATTGCTTCTGATGGTTGCAAGGATATCGAAAGCCTTATGGAGCTTTGGGAGAAGGTTATTTATACTCTAA
GTAGAGAGGAGTTGTCCAGAGTAGGGCAGATCATTTTGGCGATTTGGGAGGCTAGAAACCAAATTAAGCACAAAGGGAGCAGACCAGAATCATCTCAGATCATCAGTGAT
ATAGAGAAAAGGATAGAGAACATATCTGTGGAAATGAAGAAGCTGCAACCATCTAGCTCAGCGGAGAACCATCCTAGTCACACCAGTTGGAAGACGCCGGTGGTCAGTCA
TTGGAAGATGAATTTCGATGCGGCGTGGTTCGGAGCCTCAAATTTAGGGGGTATTGGTTGGGCCCTTTGTGACTCGGACAGGTCTCTGATTGGAGTGGGATGCAAGGAAA
TTGTTAAACACGATCCTATTAAGGTGCTTGAATCAAAAGCCATCAAGTTAGGGCTAGAAAGTCTTACCGGTATCCTCAACGCTGGCAAGAGTTGCAGGACAAAACCGATC
GAAATTGAATCAGACTCGATCGAGGTGGTGAATCTATTAAACCACAAATCGCAGGACCTTTTGGAAATTTCCTTCGTCATTGAGGAAGAGGAAAAGCTAGCGAGGGATGC
GAAGGTTACCTCCTTCTCGAAGTGTCCAAGGAGGTGTAGTTTTTTGGCGCATCTGCTTGCCCGTGTAGCAGCGGTCAACGGGGACTTCTTGTTTGTGAGTCCCCTTTTTT
CTTTTTCCTAG
Protein sequenceShow/hide protein sequence
MCRSKCRGGLGFRDLSLFNKAMLAKISWRIIKSPDSLVAKILKGKYYSGESFLKPKSGDRASMVWKSILWGRDLFENGYIWKIGNRKQVYIDQDPCLSNEGSWIPLGVKT
HLKGRRVVELISENEYWKEDIIRDAFFPSDAATILDMPRRSVSKNDEIIWEKDPKGLFSVKGAYHLACQLDSKEEVSGSDSTTSQRMWNSLWNMNAWLRMKITVWRANDA
LPTFGNIKKRGINSTNLCCFYRSKAENSKHLLWRCKKIRPIWSTLIPNLIIASDGCKDIESLMELWEKVIYTLSREELSRVGQIILAIWEARNQIKHKGSRPESSQIISD
IEKRIENISVEMKKLQPSSSAENHPSHTSWKTPVVSHWKMNFDAAWFGASNLGGIGWALCDSDRSLIGVGCKEIVKHDPIKVLESKAIKLGLESLTGILNAGKSCRTKPI
EIESDSIEVVNLLNHKSQDLLEISFVIEEEEKLARDAKVTSFSKCPRRCSFLAHLLARVAAVNGDFLFVSPLFSFS