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Lag0015380 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015380
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:11899783..11900232
RNA-Seq ExpressionLag0015380
SyntenyLag0015380
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]2.0e-2338.78Show/hide
Query:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN
        ++RLN   + PW++G DFN ++   EK+GG  R +N M+ FR  +  C L D GF GP++TWCN    S  I ERLDRFL N+         +V H    
Subjt:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN

Query:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW
         S+H P   VW + +  E    + ++ RFEA W   E C +I+ +VW
Subjt:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW

XP_012836341.1 PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata]3.5e-2337.58Show/hide
Query:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN
        ++ L +  + PW++G DFN I+ + EK+GG+ ++   ++ FRE LDVC+L D GF G +FTW NN      + ERLDR   N+    +     V HL + 
Subjt:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN

Query:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQD
         S+HSPI ++ +  + R  +Q  KR  RFEA W + + C+ IV   + D
Subjt:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQD

XP_012857002.1 PREDICTED: uncharacterized protein LOC105976270 [Erythranthe guttata]2.8e-2539.6Show/hide
Query:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN
        +++L  + N PW++G D+N I+S+ EK+GG+ R+   ++ FREALD C L D  F GP FTW NN  +   +  RLDR   ++    K    +VHH+A++
Subjt:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN

Query:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQD
         S+H P+ +V +  Q  +  +  KR  RFEA W + + C+EIV Q WQ+
Subjt:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQD

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]6.7e-2744.52Show/hide
Query:  RLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFNAS
        RL+   + PWILG DFN I+ + EK  GV R  + M +F++ LD+C L+DPGF G  FTWC+ H   + IWERLDRFLIN+A+     ++ + HL F AS
Subjt:  RLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFNAS

Query:  NHSPITVVW-EEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW
        +H PI   W    +     +  +R  RFE  W   + CKEIV +VW
Subjt:  NHSPITVVW-EEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW

XP_030958760.1 uncharacterized protein LOC115980671 [Quercus lobata]4.1e-2437.58Show/hide
Query:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN
        +K L+     PW+   DFN I+S+ EK GG +R    MDDFREA+D C  +D GF GPEFTWCN       ++ RLDR L+          + VHHL  +
Subjt:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN

Query:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQD
         S+H  + +      +  +    KR   FEA WT+ + C++I+   W D
Subjt:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQD

TrEMBL top hitse value%identityAlignment
A0A2N9H1U1 Reverse transcriptase domain-containing protein5.7e-2439.46Show/hide
Query:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN
        ++ L++  + PW+   DFN ++S  EKQGG  R    M DFR+A+DVC  +D G+ GP FTWCNN V+S  +WERLDR L             + HL   
Subjt:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN

Query:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW
         S+H PI +V +   T    +   R  RFE  W  +  C+E VM  W
Subjt:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW

A0A2N9HW04 Reverse transcriptase domain-containing protein5.7e-2439.46Show/hide
Query:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN
        ++ L++  + PW+   DFN ++S  EKQGG  R    M DFR+A+DVC  +D G+ GP FTWCNN V+S  +WERLDR L             + HL   
Subjt:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN

Query:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW
         S+H PI +V +   T    +   R  RFE  W  +  C+E VM  W
Subjt:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW

A0A2N9IIR5 Uncharacterized protein9.8e-2437.16Show/hide
Query:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN
        ++ L+   + PW    DFN ++S  EK+GG  R D  M  FR+ LD C   D GF GPEFTWCNN +N   +WERLDR ++NS    +     V+H+   
Subjt:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN

Query:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQ
         S+H P+   W    +  +    K++ RFE+ W   E C+  V   W+
Subjt:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQ

A0A2N9IXK4 RNase H domain-containing protein5.2e-2540.54Show/hide
Query:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN
        ++ L+  S+ PW    DFN ++S  EKQGG  R    M DFR+A+D C   D GF+GP FTWCNN + S  +WERLDR L  ++         V HL   
Subjt:  MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFN

Query:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQ
        +S+H+PI+  +    +      S RI RFE  W  H  CKE +   WQ
Subjt:  ASNHSPITVVWEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQ

A0A6J1DRA0 uncharacterized protein LOC1110224233.3e-2744.52Show/hide
Query:  RLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFNAS
        RL+   + PWILG DFN I+ + EK  GV R  + M +F++ LD+C L+DPGF G  FTWC+ H   + IWERLDRFLIN+A+     ++ + HL F AS
Subjt:  RLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFNAS

Query:  NHSPITVVW-EEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW
        +H PI   W    +     +  +R  RFE  W   + CKEIV +VW
Subjt:  NHSPITVVW-EEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGCTTAATGAAAACTCTAACACCCCATGGATTTTGGGTTGGGACTTCAATGCAATTATGAGCTCAATGGAAAAGCAGGGAGGTGTGCAGAGGATGGACAATGA
TATGGATGATTTTCGTGAAGCGTTGGATGTGTGTGAGCTAATAGATCCAGGTTTCAGCGGCCCAGAGTTTACTTGGTGTAACAATCATGTTAACAGTGAGATGATTTGGG
AGAGGTTGGATCGATTCTTAATCAACAGTGCAATGCAAGGAAAATGTAGCTCCATTATAGTTCATCATCTAGCTTTTAATGCCTCGAATCATAGTCCTATTACTGTTGTA
TGGGAAGAGGATCAAACAAGAGAGGTTAATCAGGGGTCGAAGCGCATCATCAGATTTGAGGCGGCATGGACCAAACATGAGGCTTGTAAAGAAATTGTTATGCAGGTTTG
GCAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGCTTAATGAAAACTCTAACACCCCATGGATTTTGGGTTGGGACTTCAATGCAATTATGAGCTCAATGGAAAAGCAGGGAGGTGTGCAGAGGATGGACAATGA
TATGGATGATTTTCGTGAAGCGTTGGATGTGTGTGAGCTAATAGATCCAGGTTTCAGCGGCCCAGAGTTTACTTGGTGTAACAATCATGTTAACAGTGAGATGATTTGGG
AGAGGTTGGATCGATTCTTAATCAACAGTGCAATGCAAGGAAAATGTAGCTCCATTATAGTTCATCATCTAGCTTTTAATGCCTCGAATCATAGTCCTATTACTGTTGTA
TGGGAAGAGGATCAAACAAGAGAGGTTAATCAGGGGTCGAAGCGCATCATCAGATTTGAGGCGGCATGGACCAAACATGAGGCTTGTAAAGAAATTGTTATGCAGGTTTG
GCAAGATTAG
Protein sequenceShow/hide protein sequence
MKRLNENSNTPWILGWDFNAIMSSMEKQGGVQRMDNDMDDFREALDVCELIDPGFSGPEFTWCNNHVNSEMIWERLDRFLINSAMQGKCSSIIVHHLAFNASNHSPITVV
WEEDQTREVNQGSKRIIRFEAAWTKHEACKEIVMQVWQD