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Lag0015397 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015397
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:12180033..12180563
RNA-Seq ExpressionLag0015397
SyntenyLag0015397
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]9.7e-3353.42Show/hide
Query:  TGIEKTEERGVGSRIEVEADGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPT
        TG E+ E   V     V  DGGS  D+LS T + AM LG   LKSS  PLVGFGG +V P+G IE PVTFG G +S+T++V+ LVV+   +YNAILG+PT
Subjt:  TGIEKTEERGVGSRIEVEADGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPT

Query:  LHGLKVVASTNHQVLKFPTEEGVGAVYGEQKMSRECYIMVLRNIDR
        +H L+ + ST HQ +KFPT  GVG + GEQ++SRECY   +R+ DR
Subjt:  LHGLKVVASTNHQVLKFPTEEGVGAVYGEQKMSRECYIMVLRNIDR

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]3.1e-3154.33Show/hide
Query:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT
        DGGSS D+ S T + AM LG + LKSSLTPL+GFGG ++ P+G IE P+TF    +SITR+V+FLVV    +YN IL +PT+H L+ + ST HQ +KFPT
Subjt:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT

Query:  EEGVGAVYGEQKMSRECYIMVLRNIDR
          GVG + GEQ++SRECY   +R  D+
Subjt:  EEGVGAVYGEQKMSRECYIMVLRNIDR

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]3.4e-3054.33Show/hide
Query:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT
        DGGSS D++S T +  M LG   LKSS  PLVGFGG  V P+G IE PVTFG G +SIT++V+FLVV    + NAILG+PT+H LK + S  HQ +KFPT
Subjt:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT

Query:  EEGVGAVYGEQKMSRECYIMVLRNIDR
          G+G + GEQ++SRECY   ++  D+
Subjt:  EEGVGAVYGEQKMSRECYIMVLRNIDR

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]1.5e-3054.33Show/hide
Query:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT
        DGGSS D +S T + AM LG++ LKSSLTPL+GFGG +V P G IE PVTF  G +SIT++V+FLVV    +YNAIL + T++ LK + ST HQ +KFPT
Subjt:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT

Query:  EEGVGAVYGEQKMSRECYIMVLRNIDR
          GVG + GEQ++ RECY   +   D+
Subjt:  EEGVGAVYGEQKMSRECYIMVLRNIDR

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]1.3e-3257.48Show/hide
Query:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT
        DGGSS D++S T + AM LG   LKSS  PLVGFGG +V  +G IE PVTFG G +S+T++V+FLVV+   +YNAILG+PT+H LK + ST HQ  KFPT
Subjt:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT

Query:  EEGVGAVYGEQKMSRECYIMVLRNIDR
          GVG + GEQ++SRECY   +R+ DR
Subjt:  EEGVGAVYGEQKMSRECYIMVLRNIDR

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141474.7e-3353.42Show/hide
Query:  TGIEKTEERGVGSRIEVEADGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPT
        TG E+ E   V     V  DGGS  D+LS T + AM LG   LKSS  PLVGFGG +V P+G IE PVTFG G +S+T++V+ LVV+   +YNAILG+PT
Subjt:  TGIEKTEERGVGSRIEVEADGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPT

Query:  LHGLKVVASTNHQVLKFPTEEGVGAVYGEQKMSRECYIMVLRNIDR
        +H L+ + ST HQ +KFPT  GVG + GEQ++SRECY   +R+ DR
Subjt:  LHGLKVVASTNHQVLKFPTEEGVGAVYGEQKMSRECYIMVLRNIDR

A0A6J1CZ14 uncharacterized protein LOC1110159011.5e-3154.33Show/hide
Query:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT
        DGGSS D+ S T + AM LG + LKSSLTPL+GFGG ++ P+G IE P+TF    +SITR+V+FLVV    +YN IL +PT+H L+ + ST HQ +KFPT
Subjt:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT

Query:  EEGVGAVYGEQKMSRECYIMVLRNIDR
          GVG + GEQ++SRECY   +R  D+
Subjt:  EEGVGAVYGEQKMSRECYIMVLRNIDR

A0A6J1DAK4 uncharacterized protein LOC1110189021.7e-3054.33Show/hide
Query:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT
        DGGSS D++S T +  M LG   LKSS  PLVGFGG  V P+G IE PVTFG G +SIT++V+FLVV    + NAILG+PT+H LK + S  HQ +KFPT
Subjt:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT

Query:  EEGVGAVYGEQKMSRECYIMVLRNIDR
          G+G + GEQ++SRECY   ++  D+
Subjt:  EEGVGAVYGEQKMSRECYIMVLRNIDR

A0A6J1DKR9 uncharacterized protein LOC1110214387.5e-3154.33Show/hide
Query:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT
        DGGSS D +S T + AM LG++ LKSSLTPL+GFGG +V P G IE PVTF  G +SIT++V+FLVV    +YNAIL + T++ LK + ST HQ +KFPT
Subjt:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT

Query:  EEGVGAVYGEQKMSRECYIMVLRNIDR
          GVG + GEQ++ RECY   +   D+
Subjt:  EEGVGAVYGEQKMSRECYIMVLRNIDR

A0A6J1DQY2 uncharacterized protein LOC1110223216.1e-3357.48Show/hide
Query:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT
        DGGSS D++S T + AM LG   LKSS  PLVGFGG +V  +G IE PVTFG G +S+T++V+FLVV+   +YNAILG+PT+H LK + ST HQ  KFPT
Subjt:  DGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVVASTNHQVLKFPT

Query:  EEGVGAVYGEQKMSRECYIMVLRNIDR
          GVG + GEQ++SRECY   +R+ DR
Subjt:  EEGVGAVYGEQKMSRECYIMVLRNIDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCTGACCGGCATCGAGAAGACAGAGGAAAGGGGCGTCGGGTCAAGGATAGAGGTTGAAGCTGATGGAGGGAGTTCTGTTGATGTTCTCTCAACCACTGGGTTTGA
TGCAATGAAGCTAGGAAGGGATCGCCTAAAGTCGAGCCTCACACCATTGGTGGGTTTCGGTGGAGGAAAGGTAAGCCCACAGGGATGCATCGAGTTTCCGGTAACCTTTG
GTGAAGGACAACAATCGATCACAAGGTTAGTCAATTTCCTGGTGGTGCACTGCGTGCCAGCGTACAATGCTATCTTGGGACAACCAACCTTGCATGGGCTAAAAGTAGTA
GCTTCCACTAATCACCAAGTCCTGAAATTTCCAACTGAAGAAGGTGTAGGGGCGGTGTATGGTGAACAGAAGATGTCAAGGGAATGCTACATCATGGTGCTCAGAAACAT
CGACAGGAAGGTTCAAGCAACATTCGCCTCGGGAGATGGCCGAGGCCGAGCATTTGAGGGATCAAGCTATCCCCTTCCAATGGAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCTGACCGGCATCGAGAAGACAGAGGAAAGGGGCGTCGGGTCAAGGATAGAGGTTGAAGCTGATGGAGGGAGTTCTGTTGATGTTCTCTCAACCACTGGGTTTGA
TGCAATGAAGCTAGGAAGGGATCGCCTAAAGTCGAGCCTCACACCATTGGTGGGTTTCGGTGGAGGAAAGGTAAGCCCACAGGGATGCATCGAGTTTCCGGTAACCTTTG
GTGAAGGACAACAATCGATCACAAGGTTAGTCAATTTCCTGGTGGTGCACTGCGTGCCAGCGTACAATGCTATCTTGGGACAACCAACCTTGCATGGGCTAAAAGTAGTA
GCTTCCACTAATCACCAAGTCCTGAAATTTCCAACTGAAGAAGGTGTAGGGGCGGTGTATGGTGAACAGAAGATGTCAAGGGAATGCTACATCATGGTGCTCAGAAACAT
CGACAGGAAGGTTCAAGCAACATTCGCCTCGGGAGATGGCCGAGGCCGAGCATTTGAGGGATCAAGCTATCCCCTTCCAATGGAACATTGA
Protein sequenceShow/hide protein sequence
MYLTGIEKTEERGVGSRIEVEADGGSSVDVLSTTGFDAMKLGRDRLKSSLTPLVGFGGGKVSPQGCIEFPVTFGEGQQSITRLVNFLVVHCVPAYNAILGQPTLHGLKVV
ASTNHQVLKFPTEEGVGAVYGEQKMSRECYIMVLRNIDRKVQATFASGDGRGRAFEGSSYPLPMEH