; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015401 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015401
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:12322808..12323692
RNA-Seq ExpressionLag0015401
SyntenyLag0015401
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]1.4e-5244.79Show/hide
Query:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN
        +FH  HDH TQ+C  L+ E++ LI+ GYL E+V   +  +   +D      +P  EIRTI+ GP   E  RKRKA++RE         IY   + K    
Subjt:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN

Query:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL
        +EF+E+EA  + HPHND LV+TL IAN KVHRIL+DGGS  D++S  A+ AM LG    + S   LV F GE+V P+G  +L VTFG G +++T +++FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL

Query:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRTYN--AKWYAESRRCRENVTSSRSG
        V+D   +YNAILGRPT+H LK + STYHQ++ F T+    +   E R  RE   +S  G
Subjt:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRTYN--AKWYAESRRCRENVTSSRSG

XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]1.3e-5046.81Show/hide
Query:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN
        +FH  H H TQ+C  L++E+E LIR GYL E+V     + P  +  G+   +P  EI+TI+ GP   ES RK K  VREA    G   +Y   +   S  
Subjt:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN

Query:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL
        +EF+++EA  + HPHNDALV+TL IANVKVHRIL+DGG+  D++S  A+  M +G   L+ +  PLV         +G I+ PVTFG G ++VT+M+ FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL

Query:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT
        VVD   +YNAILGR T+H LK + STYHQ++KF T
Subjt:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]5.5e-5748.51Show/hide
Query:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN
        +FH  H H TQ+C  L++E+E LIR GYL E+V   +      +D      +P+ EI+TI  GP+  E  +KRKA+++EA   PG   +Y          
Subjt:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN

Query:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL
        ++F+E+E   + HPHNDALV+TL I N KVHRIL+DGGS   ++S  A+ AM LG   L+ +L PLVGFGGE+V  K  IKLPVTFG G + +T+++ FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL

Query:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT
        VVD   +YNAILGRPT+H LK + STYH++LKF T
Subjt:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT

XP_023902012.1 uncharacterized protein LOC112013864 [Quercus suber]4.5e-5147.11Show/hide
Query:  FHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN-
        FH  H H T EC  L+ +IE LIR+G L  F+G+D     + +   +    PL EIR IL G S G+SS+ +KA ++          + S+ L+  SPN 
Subjt:  FHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN-

Query:  -------LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTV
               + FT+E+A  +HHPH+DA+V+TL IA+ K  R+LID GS  D+L   AF  M+LG D LRP+  PLVGFGG KV P G+I LPVT G   Q V
Subjt:  -------LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTV

Query:  TRMINFLVVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT
        T  ++FLVVDC  +YNAI+GRPTL+  K V STYH ++KF T
Subjt:  TRMINFLVVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT

XP_030936702.1 uncharacterized protein LOC115961957 [Quercus lobata]3.8e-5046.41Show/hide
Query:  FHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKA---AVREAWIEPGGQGIYSLLLNKNS
        FH  H H T EC  L+ +IE LIR+G L  FVG+DR    +     +    PL EIR I+ G   G+SS+ +K    AV+   +     G      + + 
Subjt:  FHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKA---AVREAWIEPGGQGIYSLLLNKNS

Query:  PNLEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMIN
        P + FT+E+A  IHHPH+DA+V+TL IA+    R+L+D GSLVD+L   AF  M+LG D LRP   PL+GFGG KV P G I LPV  G   Q +T+ +N
Subjt:  PNLEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMIN

Query:  FLVVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT
        FLVVDC  +YNAI+GRPTL+  K + STYH ++KF T
Subjt:  FLVVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT

TrEMBL top hitse value%identityAlignment
A0A6J1D8C9 uncharacterized protein LOC1110183006.8e-5344.79Show/hide
Query:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN
        +FH  HDH TQ+C  L+ E++ LI+ GYL E+V   +  +   +D      +P  EIRTI+ GP   E  RKRKA++RE         IY   + K    
Subjt:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN

Query:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL
        +EF+E+EA  + HPHND LV+TL IAN KVHRIL+DGGS  D++S  A+ AM LG    + S   LV F GE+V P+G  +L VTFG G +++T +++FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL

Query:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRTYN--AKWYAESRRCRENVTSSRSG
        V+D   +YNAILGRPT+H LK + STYHQ++ F T+    +   E R  RE   +S  G
Subjt:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRTYN--AKWYAESRRCRENVTSSRSG

A0A6J1DP33 uncharacterized protein LOC1110228863.9e-4842.86Show/hide
Query:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN
        +FH  H H TQ+C  L++E+E LIR GYL E+V   +  +   +D     N+P+ EIRTI+E                                 +    
Subjt:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN

Query:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL
        LEF+E+EA  + HPHNDALV+TL IAN KVHRIL+DGGS   ++S  A+ AM LG   L+ S +PLVGFGGE+V P+G I+LPV FG G +++ +M++FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL

Query:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRTYN--AKWYAESRRCRENVTSSRSG
        VV    +YN ILGRP +H LK + STYHQ++KF T +   +   E R  RE   +S  G
Subjt:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRTYN--AKWYAESRRCRENVTSSRSG

A0A6J1DQL9 uncharacterized protein LOC1110229056.4e-5146.81Show/hide
Query:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN
        +FH  H H TQ+C  L++E+E LIR GYL E+V     + P  +  G+   +P  EI+TI+ GP   ES RK K  VREA    G   +Y   +   S  
Subjt:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN

Query:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL
        +EF+++EA  + HPHNDALV+TL IANVKVHRIL+DGG+  D++S  A+  M +G   L+ +  PLV         +G I+ PVTFG G ++VT+M+ FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL

Query:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT
        VVD   +YNAILGR T+H LK + STYHQ++KF T
Subjt:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT

A0A6J1DRG9 uncharacterized protein LOC1110235875.6e-4745.96Show/hide
Query:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN
        +FH  HDH TQ+C  L++E+E LIR GYL E                            I E         K+KA VREA        +Y   +      
Subjt:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN

Query:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL
        +EF+E+EA  + H HNDALV+TL IANVKVHRIL+DGGS  D++S  A+ AM L    L+ S  PLVGFGGE+V  +G I+LPVTFG G + VT+M++FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL

Query:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT
        VV+   +YN ILGR T+H LKV+ STYHQ++KF T
Subjt:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT

A0A6J1DV51 uncharacterized protein LOC1110246622.7e-5748.51Show/hide
Query:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN
        +FH  H H TQ+C  L++E+E LIR GYL E+V   +      +D      +P+ EI+TI  GP+  E  +KRKA+++EA   PG   +Y          
Subjt:  MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPN

Query:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL
        ++F+E+E   + HPHNDALV+TL I N KVHRIL+DGGS   ++S  A+ AM LG   L+ +L PLVGFGGE+V  K  IKLPVTFG G + +T+++ FL
Subjt:  LEFTEEEAAGIHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFL

Query:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT
        VVD   +YNAILGRPT+H LK + STYH++LKF T
Subjt:  VVDCVPTYNAILGRPTLHGLKVVASTYHQALKFRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCACGGAGTCCACGACCACACAACCCAGGAATGCATACAACTAAGGGATGAAATAGAAGCCCTAATCCGAGAAGGTTACCTCATGGAATTCGTGGGACAGGACAG
AGGGAAAAGACCAATGCCATCAGATCAAGGTAAAGGAGGCAACAACCCCCTATTGGAGATACGAACCATCCTCGAAGGACCATCAGGGGGAGAGTCGAGTAGAAAGCGAA
AAGCGGCAGTTCGAGAGGCATGGATAGAGCCAGGGGGACAAGGTATATACTCGCTCTTACTCAATAAAAACTCACCAAACTTGGAGTTTACAGAGGAAGAGGCTGCAGGG
ATACACCACCCACACAATGACGCGTTGGTAGTAACCCTAACAATTGCCAATGTCAAAGTGCATCGAATTTTAATTGATGGAGGAAGTTTAGTTGATGTCCTCTCGACTGA
CGCGTTCGATGCCATGAAGTTGGGAAGCGACTGCCTGAGGCCGAGCCTTATACCGTTGGTGGGATTTGGAGGAGAAAAAGTAAGCCCAAAGGGAAACATCAAACTGCCAG
TGACGTTTGGGGAAGGACTACAGACAGTTACAAGAATGATCAACTTTCTGGTGGTGGACTGCGTCCCAACGTATAATGCCATTTTGGGGCGACCAACTTTGCATGGGCTT
AAAGTTGTGGCCTCTACTTACCATCAGGCCTTGAAGTTCCGAACGTATAATGCCAAGTGGTACGCGGAGAGCAGAAGGTGTCGAGAGAATGTTACTTCATCGCGCTCAGG
AACATTTACAAGAAGATCCAAACAACGCCCGTCTCGGGAAATAGTCGAGGCCGAGCATTTGAGGGATCAAGTTATCCCCTTCCAATGGAGCAATGACTTCTTCCTGTTGT
GTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCACGGAGTCCACGACCACACAACCCAGGAATGCATACAACTAAGGGATGAAATAGAAGCCCTAATCCGAGAAGGTTACCTCATGGAATTCGTGGGACAGGACAG
AGGGAAAAGACCAATGCCATCAGATCAAGGTAAAGGAGGCAACAACCCCCTATTGGAGATACGAACCATCCTCGAAGGACCATCAGGGGGAGAGTCGAGTAGAAAGCGAA
AAGCGGCAGTTCGAGAGGCATGGATAGAGCCAGGGGGACAAGGTATATACTCGCTCTTACTCAATAAAAACTCACCAAACTTGGAGTTTACAGAGGAAGAGGCTGCAGGG
ATACACCACCCACACAATGACGCGTTGGTAGTAACCCTAACAATTGCCAATGTCAAAGTGCATCGAATTTTAATTGATGGAGGAAGTTTAGTTGATGTCCTCTCGACTGA
CGCGTTCGATGCCATGAAGTTGGGAAGCGACTGCCTGAGGCCGAGCCTTATACCGTTGGTGGGATTTGGAGGAGAAAAAGTAAGCCCAAAGGGAAACATCAAACTGCCAG
TGACGTTTGGGGAAGGACTACAGACAGTTACAAGAATGATCAACTTTCTGGTGGTGGACTGCGTCCCAACGTATAATGCCATTTTGGGGCGACCAACTTTGCATGGGCTT
AAAGTTGTGGCCTCTACTTACCATCAGGCCTTGAAGTTCCGAACGTATAATGCCAAGTGGTACGCGGAGAGCAGAAGGTGTCGAGAGAATGTTACTTCATCGCGCTCAGG
AACATTTACAAGAAGATCCAAACAACGCCCGTCTCGGGAAATAGTCGAGGCCGAGCATTTGAGGGATCAAGTTATCCCCTTCCAATGGAGCAATGACTTCTTCCTGTTGT
GTTAA
Protein sequenceShow/hide protein sequence
MFHGVHDHTTQECIQLRDEIEALIREGYLMEFVGQDRGKRPMPSDQGKGGNNPLLEIRTILEGPSGGESSRKRKAAVREAWIEPGGQGIYSLLLNKNSPNLEFTEEEAAG
IHHPHNDALVVTLTIANVKVHRILIDGGSLVDVLSTDAFDAMKLGSDCLRPSLIPLVGFGGEKVSPKGNIKLPVTFGEGLQTVTRMINFLVVDCVPTYNAILGRPTLHGL
KVVASTYHQALKFRTYNAKWYAESRRCRENVTSSRSGTFTRRSKQRPSREIVEAEHLRDQVIPFQWSNDFFLLC