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Lag0015407 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015407
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr12:12488061..12493308
RNA-Seq ExpressionLag0015407
SyntenyLag0015407
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065481.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-0972.09Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQ
        P ++Y DN+AAISIA NPTFHER KHIEIDCHF+ +KI QG Q
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQ
XP_016452318.1 PREDICTED: uncharacterized protein LOC107776883 [Nicotiana tabacum]3.8e-0969.05Show/hide
Query:  MPVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQG
        +P+ VYYDNQAA+ IA NP FHER KHIE+DCHFVR+K+ +G
Subjt:  MPVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQG
XP_019058891.1 PREDICTED: uncharacterized protein LOC109116981 [Tarenaya hassleriana]2.2e-0943.53Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQLDCFGSLRSAINLIRLDARKKNSHIHLFNNGEDKFRIIAFSE
        PV ++ D+ AA+ IA NP FHER KHIE+DCHFVREKI QG     +      +     D   K S++ +FNN   K  +I   E
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQLDCFGSLRSAINLIRLDARKKNSHIHLFNNGEDKFRIIAFSE
XP_031249394.1 uncharacterized protein LOC116107227 [Pistacia vera]1.7e-0975.61Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQG
        P ++YYDNQAAI IA NPTFHER KHIEIDCHFVRE++  G
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQG
XP_031745923.1 uncharacterized protein LOC116406346 [Cucumis sativus]2.9e-0976.19Show/hide
Query:  MPVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQG
        MP  V+ DNQAAI+IA NPTFHER KHIEIDCHFVR+KI +G
Subjt:  MPVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQG
TrEMBL top hitse value%identityAlignment
A0A1S3XGM8 uncharacterized protein LOC1077650394.1e-0949.28Show/hide
Query:  VVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQLDCFGSLRSAINLIRLDARKKNSHIHL
        V +Y DN+AAI  A NP FHER+KHIEIDCHF+REKI QG     + +       I      K  H+HL
Subjt:  VVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQLDCFGSLRSAINLIRLDARKKNSHIHL
A0A1S3YJU3 uncharacterized protein LOC1077768831.8e-0969.05Show/hide
Query:  MPVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQG
        +P+ VYYDNQAA+ IA NP FHER KHIE+DCHFVR+K+ +G
Subjt:  MPVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQG
A0A5D3CBP3 Putative mitochondrial protein8.2e-1072.09Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQ
        P ++Y DN+AAISIA NPTFHER KHIEIDCHF+ +KI QG Q
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQ
A0A5D3E561 Putative mitochondrial protein5.3e-0969.77Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQ
        P ++Y DN+ AISIA N TFHER KHIEIDCHF+R+KI QG Q
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQ
Q9MAR9 F28H19.4 protein3.1e-0944.44Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQLDCFGSLRSAINLIRLDARKKNSHIHLFN
        P+ ++ DNQAAI IA N  FHER KHIE+DCH V EKID+G  L C+   +  +  I      +    H++N
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQLDCFGSLRSAINLIRLDARKKNSHIHLFN
SwissProt top hitse value%identityAlignment
P04146 Copia protein1.2e-0555.26Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKI
        P+ +Y DNQ  ISIA NP+ H+R KHI+I  HF RE++
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKI
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.4e-0652.38Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGA
        P V+Y DN  A  +  NP FH RMKHI ID HF+R ++  GA
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGA
Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.4e-0650Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGA
        P V+Y DN  A  +  NP FH RMKHI +D HF+R ++  GA
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGA
Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.2e-0762.16Show/hide
Query:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREK
        P +++ DN AAI IA N  FHER KHIE DCH VRE+
Subjt:  PVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTTGTTGTTTACTATGATAATCAGGCTGCCATTTCAATTGCTTTGAATCCAACCTTTCATGAGCGTATGAAGCATATTGAAATCGACTGCCATTTTGTCCGAGA
GAAGATTGATCAAGGAGCTCAGTTGGACTGCTTTGGATCACTTAGAAGTGCGATAAATCTTATTAGACTTGATGCTCGAAAGAAAAATTCACATATCCACCTCTTCAATA
ATGGTGAAGACAAGTTTCGGATAATAGCTTTTTCTGAGAACAAAGATCTTGCTTGGATGCTCGCTAGGGTCCACAAAGACAGGGTGTTTAAAGCATTTTACATTGTCAAG
GAAGATGACGAGAACCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGTTGTTGTTTACTATGATAATCAGGCTGCCATTTCAATTGCTTTGAATCCAACCTTTCATGAGCGTATGAAGCATATTGAAATCGACTGCCATTTTGTCCGAGA
GAAGATTGATCAAGGAGCTCAGTTGGACTGCTTTGGATCACTTAGAAGTGCGATAAATCTTATTAGACTTGATGCTCGAAAGAAAAATTCACATATCCACCTCTTCAATA
ATGGTGAAGACAAGTTTCGGATAATAGCTTTTTCTGAGAACAAAGATCTTGCTTGGATGCTCGCTAGGGTCCACAAAGACAGGGTGTTTAAAGCATTTTACATTGTCAAG
GAAGATGACGAGAACCAGTAA
Protein sequenceShow/hide protein sequence
MPVVVYYDNQAAISIALNPTFHERMKHIEIDCHFVREKIDQGAQLDCFGSLRSAINLIRLDARKKNSHIHLFNNGEDKFRIIAFSENKDLAWMLARVHKDRVFKAFYIVK
EDDENQ