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Lag0015409 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015409
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRAB6-interacting golgin
Genome locationchr12:12530428..12533622
RNA-Seq ExpressionLag0015409
SyntenyLag0015409
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137876.1 GRB10-interacting GYF protein 2 [Cucumis sativus]4.7e-29100Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

XP_008442808.1 PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo]4.7e-29100Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

XP_022144720.1 uncharacterized protein LOC111014340 [Momordica charantia]6.0e-2492.41Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQ E  Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

XP_022945279.1 uncharacterized protein LOC111449572 [Cucurbita moschata]2.0e-2796.2Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

XP_038903091.1 GRB10-interacting GYF protein 2-like [Benincasa hispida]4.0e-2898.73Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

TrEMBL top hitse value%identityAlignment
A0A0A0LGI7 RAB6-interacting golgin2.3e-29100Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

A0A1S3B6L6 RAB6-interacting golgin2.3e-29100Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

A0A5D3DPH8 RAB6-interacting golgin2.3e-29100Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

A0A6J1G0J9 RAB6-interacting golgin9.6e-2896.2Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

A0A6J1KYK3 RAB6-interacting golgin9.6e-2896.2Show/hide
Query:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIRE
Subjt:  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)9.5e-2067.95Show/hide
Query:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IRE
Subjt:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

AT2G36410.2 Family of unknown function (DUF662)9.5e-2067.95Show/hide
Query:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IRE
Subjt:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

AT2G36410.3 Family of unknown function (DUF662)9.5e-2067.95Show/hide
Query:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IRE
Subjt:  QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

AT3G09980.1 Family of unknown function (DUF662)1.6e-1982.26Show/hide
Query:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA IRE
Subjt:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE

AT3G52920.1 Family of unknown function (DUF662)4.4e-1771.23Show/hide
Query:  QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE
        Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGRVEEET+RLA IRE
Subjt:  QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCAGAACAAGCTCAGCAGCAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTC
AGCTCTCTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCACAGTTAGGCCGAGTTGAAGAAGAAACTAAACGCC
TCGCTTGCATCCGTGAGGGGAAAAAGTTGGGGGTAAAATTGCTGAAGATCTCCCTTCTCCTCCGTTTCCGGCCGGAAATGGAGGAGGGAGTGGACCTCAGACTACCGACC
GTCACTGACCTCCGCCGATCGGTCGCCACCGTACACCTTCGTCGATCGATCGCCACTGTTGACCTCTGTCGATCAGTCCCCACCGTTGACCTCCGACTGTCGGCCGCCAT
CGACCTCCACCAACCAGCTGCCACCGACCGTCATCGACCTCCAACTACAAGCCGTAGCCAACCTCCACCGACCGACCGCCATCATCAACCTTTGACTACCGGTCGCCATG
CTACCGACCTTTGCCAACGACGCCACCGTCGACCTCCAACTGTTGATTGTCGTCGACCTCCACTAACCGACCGCTACCGTCGACCTACGACTATCGGCCGCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCCAGAACAAGCTCAGCAGCAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTC
AGCTCTCTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCACAGTTAGGCCGAGTTGAAGAAGAAACTAAACGCC
TCGCTTGCATCCGTGAGGGGAAAAAGTTGGGGGTAAAATTGCTGAAGATCTCCCTTCTCCTCCGTTTCCGGCCGGAAATGGAGGAGGGAGTGGACCTCAGACTACCGACC
GTCACTGACCTCCGCCGATCGGTCGCCACCGTACACCTTCGTCGATCGATCGCCACTGTTGACCTCTGTCGATCAGTCCCCACCGTTGACCTCCGACTGTCGGCCGCCAT
CGACCTCCACCAACCAGCTGCCACCGACCGTCATCGACCTCCAACTACAAGCCGTAGCCAACCTCCACCGACCGACCGCCATCATCAACCTTTGACTACCGGTCGCCATG
CTACCGACCTTTGCCAACGACGCCACCGTCGACCTCCAACTGTTGATTGTCGTCGACCTCCACTAACCGACCGCTACCGTCGACCTACGACTATCGGCCGCTATTGA
Protein sequenceShow/hide protein sequence
MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREGKKLGVKLLKISLLLRFRPEMEEGVDLRLPT
VTDLRRSVATVHLRRSIATVDLCRSVPTVDLRLSAAIDLHQPAATDRHRPPTTSRSQPPPTDRHHQPLTTGRHATDLCQRRHRRPPTVDCRRPPLTDRYRRPTTIGRY