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Lag0015410 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015410
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:12536841..12543542
RNA-Seq ExpressionLag0015410
SyntenyLag0015410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESQ39300.1 hypothetical protein EUTSA_v10001742mg, partial [Eutrema salsugineum]6.9e-1239.29Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIDL-SNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEK
        MPVMEKL+MFV QEPVVAASCLIGG+ L   +     E S S           G+   +LI K  V           + FSEG                 
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIDL-SNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEK

Query:  AIGLTINLDKSSIVGMNTLEEEVLEMAELVGCLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK
                  SS VG                 LFLPA VRP+LDS EASKQV  P L+DV+A +TGKK
Subjt:  AIGLTINLDKSSIVGMNTLEEEVLEMAELVGCLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK

KAF8413334.1 hypothetical protein HHK36_001313 [Tetracentron sinense]6.9e-1237.78Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIDLSNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKA
        M VMEKLKMFVVQEPVVAASCLI G+             CS                    K E++     F + +L             +   S ++ A
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIDLSNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKA

Query:  IGLTINLDKSSIVGMNTLEEEVLEMAELVGC-------------LFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK
           T +L    + G+  L E ++E      C             LFLPA VRP+LDS E SKQVPQP LSDVVA MTGKK
Subjt:  IGLTINLDKSSIVGMNTLEEEVLEMAELVGC-------------LFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK

XP_016168118.1 uncharacterized protein LOC107610598 [Arachis ipaensis]4.0e-1241.12Show/hide
Query:  GIDLSNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLE
        G D  + L N S+   S +  +GK  R G +   L+G+D +E+SH+QFA DT+ F         N+K LL  FE   GL+IN +KSS++ +N  +E V  
Subjt:  GIDLSNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLE

Query:  MAELVGC
        M ELVGC
Subjt:  MAELVGC

XP_016177716.1 uncharacterized protein LOC107620006 [Arachis ipaensis]1.7e-1042.39Show/hide
Query:  VGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGCL--FLP
        VG+  + G +   LIG+D + +SH+QFA DT+ F    +  I+N+K LL  FE  +GL+IN DKSS++ +N  E+ +  M +L+GC   FLP
Subjt:  VGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGCL--FLP

XP_029151561.1 uncharacterized protein LOC114925942 [Arachis hypogaea]9.9e-1143.02Show/hide
Query:  VGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGC
        +G   R G++   L+G+D +E+SH+QFAYDT+ F    +  I+N+K LL  FE   GL+IN DKSS++  N  ++ V  M  L+GC
Subjt:  VGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGC

TrEMBL top hitse value%identityAlignment
A0A6A3BXJ5 Orange protein isoform 24.1e-1036.61Show/hide
Query:  KGFLKGFLIGKDE--VEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGC---LFLPAFVRPMLDSYE
        +G   G +IG+++  V VSH+QFA D + FS  ++M I+N K +L  F+   GL +NL KS + G+N  EEE+LE+A  +GC    F   ++   L +  
Subjt:  KGFLKGFLIGKDE--VEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGC---LFLPAFVRPMLDSYE

Query:  ASKQVPQPVLSD
         S  + +PV+++
Subjt:  ASKQVPQPVLSD

A0A6P4BP55 uncharacterized protein LOC1074663886.9e-1039.78Show/hide
Query:  VGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGC--LFLPA
        VG+  R G +   L+G+D +E+SH+QF  DT+ F      ++ N+K LL  FE   GL+IN DKS+++ +N  ++ V +M  L+GC  + LPA
Subjt:  VGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGC--LFLPA

A0A6P5MS87 uncharacterized protein LOC1102755954.1e-1039.53Show/hide
Query:  VGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGC
        +G+  R  ++   L+G+D +E+SH+QFA DT+ F    +  I+N+K +L +FE   GL+IN DKSS++ +N  E+    M  L+GC
Subjt:  VGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKSSIVGMNTLEEEVLEMAELVGC

E5GCM8 Fiber protein fb116.9e-1035.33Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIDLSNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKA
        MPVMEKLKMFVVQEPVVAASC+IGGI                                                                          
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIDLSNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKA

Query:  IGLTINLDKSSIVGMNTLEEEVLEMAELVGCLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK
                                       LFLPAFVRP+LDSYEASKQVPQPVLSDVVA+MTGKK
Subjt:  IGLTINLDKSSIVGMNTLEEEVLEMAELVGCLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK

V4KN18 Uncharacterized protein (Fragment)3.3e-1239.29Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIGGIDL-SNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEK
        MPVMEKL+MFV QEPVVAASCLIGG+ L   +     E S S           G+   +LI K  V           + FSEG                 
Subjt:  MPVMEKLKMFVVQEPVVAASCLIGGIDL-SNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEK

Query:  AIGLTINLDKSSIVGMNTLEEEVLEMAELVGCLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK
                  SS VG                 LFLPA VRP+LDS EASKQV  P L+DV+A +TGKK
Subjt:  AIGLTINLDKSSIVGMNTLEEEVLEMAELVGCLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46540.1 unknown protein4.9e-0856.36Show/hide
Query:  MNTLEEEVLEMAELVG--CLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK
        M   +E V+  + L+G   LFLPA VRP+LDS EASKQV  P L+DV+A +TGKK
Subjt:  MNTLEEEVLEMAELVG--CLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTTGTTCAAGAGCCTGTGGTGGCTGCATCTTGTTTAATCGGTGGAATTGATTTGAGCAATCAACTTCCCAATAATTCTGA
GGCTTCTTGCTCAGACTTCTTAAAAGTTGGAAAATGGTGGAGGAAAGGTTTTTTAAAAGGCTTCCTGATTGGCAAAGACGAGGTAGAAGTGTCTCACATCCAATTTGCAT
ATGACACCCTCGCATTTAGCGAAGGGAATCAAATGATGATTGAGAATTGGAAGACCCTTTTGAGCTTCTTCGAGAAAGCTATAGGATTGACTATTAATTTGGATAAATCA
TCCATAGTTGGTATGAACACCCTTGAGGAAGAGGTCCTTGAGATGGCTGAGCTAGTGGGCTGTCTCTTCCTCCCAGCCTTTGTAAGGCCAATGCTGGATTCCTATGAAGC
ATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAATATGACTGGAAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTTGTTCAAGAGCCTGTGGTGGCTGCATCTTGTTTAATCGGTGGAATTGATTTGAGCAATCAACTTCCCAATAATTCTGA
GGCTTCTTGCTCAGACTTCTTAAAAGTTGGAAAATGGTGGAGGAAAGGTTTTTTAAAAGGCTTCCTGATTGGCAAAGACGAGGTAGAAGTGTCTCACATCCAATTTGCAT
ATGACACCCTCGCATTTAGCGAAGGGAATCAAATGATGATTGAGAATTGGAAGACCCTTTTGAGCTTCTTCGAGAAAGCTATAGGATTGACTATTAATTTGGATAAATCA
TCCATAGTTGGTATGAACACCCTTGAGGAAGAGGTCCTTGAGATGGCTGAGCTAGTGGGCTGTCTCTTCCTCCCAGCCTTTGTAAGGCCAATGCTGGATTCCTATGAAGC
ATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAATATGACTGGAAAGAAATAA
Protein sequenceShow/hide protein sequence
MPVMEKLKMFVVQEPVVAASCLIGGIDLSNQLPNNSEASCSDFLKVGKWWRKGFLKGFLIGKDEVEVSHIQFAYDTLAFSEGNQMMIENWKTLLSFFEKAIGLTINLDKS
SIVGMNTLEEEVLEMAELVGCLFLPAFVRPMLDSYEASKQVPQPVLSDVVANMTGKK