CuGenDBv2

Gene ID	Lag0015425
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Vesicle transport protein SEC20
Genome location	chr12:12849860..12853081
RNA-Seq Expression	Lag0015425
Synteny	Lag0015425
Gene Ontology terms	GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process) GO:0061025 - membrane fusion (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005484 - SNAP receptor activity (molecular function)
InterPro domains	IPR005606 - Sec20

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7025339.1 Vesicle transport protein SEC20 [Cucurbita argyrosperma subsp. argyrosperma]

5.9e-50

93.22

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKVAEEVDRVKNEWNDAF QTLDRIKAIESY+KQ GST+ NSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

XP_022157044.1 uncharacterized protein LOC111023863 [Momordica charantia]

5.5e-48

89.83

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKV+EEVDRVKNEWNDA+ +TLD+IKAIE YEKQ  STEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSL+ESWKNQSHNLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

XP_022960516.1 uncharacterized protein LOC111461229 [Cucurbita moschata]

5.9e-50

93.22

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKVAEEVDRVKNEWNDAF QTLDRIKAIESY+KQ GST+ NSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

XP_023005057.1 uncharacterized protein LOC111498164 [Cucurbita maxima]

1.7e-49

92.37

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKVAEEVDRVKNEWNDAF QTLDRIKAIESY+KQ GST+ NSLPRLNALAQDGLNLLSSLEFKLDLL PQLLSDSEVEAAQSLLESWKNQSHNLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

XP_023513480.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111778073 [Cucurbita pepo subsp. pepo]

5.9e-50

93.22

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKVAEEVDRVKNEWNDAF QTLDRIKAIESY+KQ GST+ NSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TE96 Putative vesicle transporter Sec20

7.3e-46

87.29

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKVAEEV+RVKNEWN+AF  TL+RIKAIESY+KQ  S  KNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSE+EAAQSLLESWKNQS NLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

A0A6J1DTI9 uncharacterized protein LOC111023863

2.7e-48

89.83

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKV+EEVDRVKNEWNDA+ +TLD+IKAIE YEKQ  STEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSL+ESWKNQSHNLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

A0A6J1H7T9 uncharacterized protein LOC111461229

2.9e-50

93.22

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKVAEEVDRVKNEWNDAF QTLDRIKAIESY+KQ GST+ NSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

A0A6J1KS49 uncharacterized protein LOC111498164

8.4e-50

92.37

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKVAEEVDRVKNEWNDAF QTLDRIKAIESY+KQ GST+ NSLPRLNALAQDGLNLLSSLEFKLDLL PQLLSDSEVEAAQSLLESWKNQSHNLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

E5GCN4 Vesicle transport protein SEC20

7.3e-46

87.29

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR
        MDKVAEEV+RVKNEWN+AF  TL+RIKAIESY+KQ  S  KNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSE+EAAQSLLESWKNQS NLRS+LR
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLR

Query:  NANVQAKANMRKAAQEEK
        NAN+QAKANMRKAAQEE+
Subjt:  NANVQAKANMRKAAQEEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G24315.1 Sec20 family protein

1.0e-31

60.33

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Query:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQ---IGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRS
        MD+V  EV++ K EW +A+ +T+  I +I+ Y K     G  EK SL RLN LAQDGL+LL+SL+F LDLLAPQL SD +V++ QSLLE+WKNQ H+LR 
Subjt:  MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQ---IGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRS

Query:  NLRNANVQAKANMRKAAQEEK
        NLR+AN+QAK NMRKAAQEE+
Subjt:  NLRNANVQAKANMRKAAQEEK

Sequences

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CDS sequence

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ATGGACAAGGTTGCAGAGGAGGTGGATCGGGTAAAAAATGAGTGGAATGACGCTTTCCGTCAGACTCTCGACCGGATTAAGGCAATCGAATCATACGAGAAACAAATTGG
GTCGACGGAGAAGAATTCGCTCCCGAGATTGAATGCTCTGGCTCAAGATGGATTGAATCTGCTGTCTTCGTTGGAATTCAAGCTCGATCTTCTTGCGCCCCAGTTGCTCT
CTGATTCTGAAGTCGAGGCTGCTCAATCGTTGCTTGAATCCTGGAAAAACCAATCCCACAATTTGCGATCGAATTTGAGAAATGCTAATGTGCAAGCAAAGGCCAACATG
AGAAAAGCTGCTCAGGAGGAGAAAGCATCACAGAAAGCCTTCGTCGAACCCGTCAGCTTATGGTTCAGGAGATGGAAAGAACTGCAAGCACAATCGAGGCTTTCGGGCTT
GAGCTCTGCCTTACGAGATAAGGGCACAGTTTGGCATGCATATGTTTGGTTTCTTCATTGTATTATGGGAGGAATAGTAGGTTCTTTGAAGAGGTGGAGAGATTCAGTGC
GGAGGTTTGGGAGGTTGTTAGGTTTAAGGCTTTGGGAGGCTGTTAAGTTTAACGCTTCTTTATGA

mRNA sequence

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Protein sequence

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MDKVAEEVDRVKNEWNDAFRQTLDRIKAIESYEKQIGSTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSNLRNANVQAKANM
RKAAQEEKASQKAFVEPVSLWFRRWKELQAQSRLSGLSSALRDKGTVWHAYVWFLHCIMGGIVGSLKRWRDSVRRFGRLLGLRLWEAVKFNASL

Lag0015425 (gene) of Sponge gourd (AG-4) v1 genome