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Lag0015426 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015426
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr12:12853679..12855958
RNA-Seq ExpressionLag0015426
SyntenyLag0015426
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EMS61533.1 putative disease resistance RPP8-like protein 4 [Triticum urartu]2.0e-0534.45Show/hide
Query:  NENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYMNEEES-IISKVNIFEATTALSPKVGVLS
        N N  +G +  + RD  G  I    +KIDW  DI   EA A+  GL +L ++ G   +L + SD+ E++  MN      I+   IF+    L+    +  
Subjt:  NENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYMNEEES-IISKVNIFEATTALSPKVGVLS

Query:  FKHCLRSRNSIVHELARKA
        F+HC R  N + HELAR A
Subjt:  FKHCLRSRNSIVHELARKA

PNT77801.1 hypothetical protein BRADI_1g69052v3, partial [Brachypodium distachyon]2.9e-0431.58Show/hide
Query:  GRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGF-KLEVESDSREIMNYMNEEESIISKVN-IFEATTALSPKVGVLSFKHCL
        G I  + RD+ G  I     K+    D+ + E  A+ +GL        +G  ++ +  D+ E++  +N  E + S    IFE   AL  +VG     HC 
Subjt:  GRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGF-KLEVESDSREIMNYMNEEESIISKVN-IFEATTALSPKVGVLSFKHCL

Query:  RSRNSIVHELARKA
        R+ NS+ HELAR+A
Subjt:  RSRNSIVHELARKA

VAH46580.1 unnamed protein product [Triticum turgidum subsp. durum]3.4e-0534.51Show/hide
Query:  GRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYM-NEEESIISKVNIFEATTALSPKVGVLSFKHCLR
        G    + RD  G  I  G  K DW  D+ T E  A+  GL  L ++ G   +L+V SD+ E++N M N  +S  +   +F+    L+    +  F+HC R
Subjt:  GRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYM-NEEESIISKVNIFEATTALSPKVGVLSFKHCLR

Query:  SRNSIVHELARKA
          N + HELAR A
Subjt:  SRNSIVHELARKA

XP_024310275.1 uncharacterized protein LOC112268623 [Brachypodium distachyon]2.9e-0430.97Show/hide
Query:  GRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYMNEE-ESIISKVNIFEATTALSPKVGVLSFKHCLR
        G +  + RD  G  I     K+D   D+ ++EAHA+ IGL           ++ V SD+ E++  MNE+ ++  +   IF+  ++L+     +SF+HC R
Subjt:  GRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYMNEE-ESIISKVNIFEATTALSPKVGVLSFKHCLR

Query:  SRNSIVHELARKA
          N + +ELA  A
Subjt:  SRNSIVHELARKA

TrEMBL top hitse value%identityAlignment
A0A2K2DU38 RNase H domain-containing protein (Fragment)1.4e-0431.58Show/hide
Query:  GRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGF-KLEVESDSREIMNYMNEEESIISKVN-IFEATTALSPKVGVLSFKHCL
        G I  + RD+ G  I     K+    D+ + E  A+ +GL        +G  ++ +  D+ E++  +N  E + S    IFE   AL  +VG     HC 
Subjt:  GRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGF-KLEVESDSREIMNYMNEEESIISKVN-IFEATTALSPKVGVLSFKHCL

Query:  RSRNSIVHELARKA
        R+ NS+ HELAR+A
Subjt:  RSRNSIVHELARKA

A0A452YTS1 RNase H domain-containing protein2.1e-0534.43Show/hide
Query:  NENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYM-NEEESIISKVNIFEATTALSPKVGVLS
        + +L +G    + RD  G+ I  G  KIDW  D+ T EA A+  GL  L +K G   +L + SD+ E+++ M N  +S      +FE    ++    +  
Subjt:  NENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYM-NEEESIISKVNIFEATTALSPKVGVLS

Query:  FKHCLRSRNSIVHELARKAASF
        F+HC R  N + HELAR A  F
Subjt:  FKHCLRSRNSIVHELARKAASF

A0A453BDG5 RNase H domain-containing protein1.3e-0532.77Show/hide
Query:  NENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYM-NEEESIISKVNIFEATTALSPKVGVLS
        + +L +G    + RD  G  I  G  ++DW  D+ T EA A+  GL TL +K G   +L V SD+ E+++ M N  +S  +   +F+    ++ +  +  
Subjt:  NENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYM-NEEESIISKVNIFEATTALSPKVGVLS

Query:  FKHCLRSRNSIVHELARKA
        F+HC R  N + HE+AR A
Subjt:  FKHCLRSRNSIVHELARKA

M7ZEC3 Putative disease resistance RPP8-like protein 49.6e-0634.45Show/hide
Query:  NENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYMNEEES-IISKVNIFEATTALSPKVGVLS
        N N  +G +  + RD  G  I    +KIDW  DI   EA A+  GL +L ++ G   +L + SD+ E++  MN      I+   IF+    L+    +  
Subjt:  NENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTLEAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYMNEEES-IISKVNIFEATTALSPKVGVLS

Query:  FKHCLRSRNSIVHELARKA
        F+HC R  N + HELAR A
Subjt:  FKHCLRSRNSIVHELARKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATCGATGAGGAAGAAGAGAGAGGAGAGAAGACGAAAAATGATCATTTGAGATATGAAATTAGGCTACAAAAGATTACAAATCTCAAGACACTAAGGAAGTTTGT
CAAGTTTAAGCAGAAAAACCTCCTCAAGGTTGTTCCGGAGGATAACATCGAAAAGGAAACCAAGGAATCTACAACACATTTGATGTGGGAGTATAAGCCGGTTAAAGAGA
ACGAAAACTTGGATCAAGGTAGGATCGAGTGGATTGCGCGTGACTCTGATGGATCTCTCATCTGTGTAGGGCGACAAAAAATTGATTGGAAATGGGATATTAGAACTCTC
GAAGCTCATGCAATGTGGATAGGGCTTAGAACTTTACGCGAGAAATTCGGTGAGGGATTCAAGCTGGAAGTTGAATCAGACTCAAGGGAGATCATGAATTACATGAATGA
AGAAGAGTCGATAATCTCTAAGGTTAACATTTTTGAGGCCACAACCGCCTTGTCCCCTAAAGTGGGAGTGCTCTCCTTCAAGCATTGCCTAAGATCCCGTAACTCAATCG
TTCACGAATTGGCACGTAAAGCTGCTTCTTTTGAGATGTGTCGTTGCGGGTTGTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCATCGATGAGGAAGAAGAGAGAGGAGAGAAGACGAAAAATGATCATTTGAGATATGAAATTAGGCTACAAAAGATTACAAATCTCAAGACACTAAGGAAGTTTGT
CAAGTTTAAGCAGAAAAACCTCCTCAAGGTTGTTCCGGAGGATAACATCGAAAAGGAAACCAAGGAATCTACAACACATTTGATGTGGGAGTATAAGCCGGTTAAAGAGA
ACGAAAACTTGGATCAAGGTAGGATCGAGTGGATTGCGCGTGACTCTGATGGATCTCTCATCTGTGTAGGGCGACAAAAAATTGATTGGAAATGGGATATTAGAACTCTC
GAAGCTCATGCAATGTGGATAGGGCTTAGAACTTTACGCGAGAAATTCGGTGAGGGATTCAAGCTGGAAGTTGAATCAGACTCAAGGGAGATCATGAATTACATGAATGA
AGAAGAGTCGATAATCTCTAAGGTTAACATTTTTGAGGCCACAACCGCCTTGTCCCCTAAAGTGGGAGTGCTCTCCTTCAAGCATTGCCTAAGATCCCGTAACTCAATCG
TTCACGAATTGGCACGTAAAGCTGCTTCTTTTGAGATGTGTCGTTGCGGGTTGTTTTTGTAG
Protein sequenceShow/hide protein sequence
MSIDEEEERGEKTKNDHLRYEIRLQKITNLKTLRKFVKFKQKNLLKVVPEDNIEKETKESTTHLMWEYKPVKENENLDQGRIEWIARDSDGSLICVGRQKIDWKWDIRTL
EAHAMWIGLRTLREKFGEGFKLEVESDSREIMNYMNEEESIISKVNIFEATTALSPKVGVLSFKHCLRSRNSIVHELARKAASFEMCRCGLFL