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Lag0015432 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015432
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr12:12992884..12996216
RNA-Seq ExpressionLag0015432
SyntenyLag0015432
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber]8.0e-1037.14Show/hide
Query:  PPHINDDQPPL---RWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAIN
        PP +    P L    W+PP   ++K+N D A  S+  S G+GVVIRN+ G ++GA S  + +   A  VE +A+ EG+  A D G  K+++E+D    +N
Subjt:  PPHINDDQPPL---RWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAIN

Query:  LVPDP
         V  P
Subjt:  LVPDP

XP_023880097.1 uncharacterized protein LOC111992470 [Quercus suber]3.6e-1033.33Show/hide
Query:  LKIYKDANSKVVDQVPPHINDDQPPL---RWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQG
        +K  ++   ++    P  +    PPL    W+PP   ++K+N D A  S+  S G+GVVIRN+ G ++G+ S  + V   A  VE +A+ EG+  A D G
Subjt:  LKIYKDANSKVVDQVPPHINDDQPPL---RWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQG

Query:  CSKLIVEADCALAINLVPDP
          K+++E+D    +N V  P
Subjt:  CSKLIVEADCALAINLVPDP

XP_023887146.1 uncharacterized protein LOC111999255 [Quercus suber]3.6e-1036.79Show/hide
Query:  NSKVVDQVPPHINDDQPP--LRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEA
        +S +  +VP  I    PP   +W+PP  N+ K+N D A  SD +S G+G +IRN LG ++ A +  + +     +VEV A    +CFAK+ G + +IVE 
Subjt:  NSKVVDQVPPHINDDQPP--LRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEA

Query:  DCALAI
        D  + I
Subjt:  DCALAI

XP_030923049.1 uncharacterized protein LOC115949928 [Quercus lobata]1.0e-0941.94Show/hide
Query:  DQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAINLV
        +QPP RW PP  N++K+NVD A   +  S  VGVVIRN  GE++GA S  +     A   E KA+  GI FA D G   ++VE D    +  +
Subjt:  DQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAINLV

XP_030942039.1 uncharacterized protein LOC115967096 [Quercus lobata]8.0e-1035.34Show/hide
Query:  VDYLKIYKDANSKVVDQVPPHINDDQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQG
        VDYLK Y DA   +   +P H    Q    W PP E ++KLN D A   + A++G G VIRN+ GE++ A ++       +  VEV A  + + FA D G
Subjt:  VDYLKIYKDANSKVVDQVPPHINDDQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQG

Query:  CSKLIVEADCALAINLVPDPLPRLIPLYLALSD
         +++++E D AL + ++    P L  L L   D
Subjt:  CSKLIVEADCALAINLVPDPLPRLIPLYLALSD

TrEMBL top hitse value%identityAlignment
A0A5B7A5C8 Uncharacterized protein1.9e-0936.13Show/hide
Query:  VDYLKIYKDANSK--VVDQVPPHINDDQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKD
        + YLK ++DA  K  VV   P  +        W+PP++  +KLN+D +W     + GVG VIR+  GE+IG  +  +     A   +  AI  GI FA+D
Subjt:  VDYLKIYKDANSK--VVDQVPPHINDDQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKD

Query:  QGCSKLIVEADCALAINLV
         G  KL+VE DC   I+ +
Subjt:  QGCSKLIVEADCALAINLV

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.9e-0934.41Show/hide
Query:  DQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAINLV
        D    RW PP  N WKLN D AW++D  + G+G ++R++ GE+I      ++ +     +EV AI EG+   + + C  + +E+D   AI+L+
Subjt:  DQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAINLV

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X21.9e-0934.41Show/hide
Query:  DQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAINLV
        D    RW PP  N WKLN D AW++D  + G+G ++R++ GE+I      ++ +     +EV AI EG+   + + C  + +E+D   AI+L+
Subjt:  DQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAINLV

A0A7N2LIH6 Uncharacterized protein3.0e-1035.37Show/hide
Query:  RWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAINLV-----PDPLPRL
        RW PPL++++K+NVD A   +  + G+GVVIRN  G+I+GA S  +    +A   E KA   GI  A D G   ++VE D  L I  +     P P+ ++
Subjt:  RWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAINLV-----PDPLPRL

Query:  IP---LYLALSDSSPNLEDGDRR---LRLLKRESKVAG---VWGRES
        I     YL +  S   +    R      LL RESK      +W  ES
Subjt:  IP---LYLALSDSSPNLEDGDRR---LRLLKRESKVAG---VWGRES

A0A803P9C5 Uncharacterized protein6.6e-1038.2Show/hide
Query:  PPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAIN
        P  +W PP EN +KLNVD A  S  +  G+GV++RN  G+++GA S     ++K+  +E KA++ G+ +AK        VE DC + +N
Subjt:  PPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEADCALAIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTAGACTATCTTAAAATATACAAAGATGCCAATTCAAAAGTTGTGGACCAAGTACCTCCCCACATCAACGATGATCAACCCCCTTTGAGATGGATCCCTCCTCT
AGAGAATTACTGGAAATTAAATGTAGATGTTGCATGGAAGTCGGACCCTGCTTCGACTGGAGTTGGTGTAGTAATCAGGAACCAGCTGGGAGAGATAATTGGAGCAAAAT
CATCATTTGTGAAAGTGGATTACAAAGCTCCTTTGGTTGAAGTTAAAGCTATCTACGAAGGCATTTGTTTTGCCAAAGATCAGGGCTGCTCGAAATTGATTGTGGAAGCT
GATTGTGCCCTAGCAATCAACTTAGTGCCCGACCCTCTCCCTCGTTTGATCCCTCTCTATCTCGCTCTCTCTGATTCGAGCCCAAATCTAGAAGACGGAGATCGTCGCTT
GAGGTTGTTGAAGCGCGAATCCAAAGTTGCTGGAGTGTGGGGCCGCGAATCTGATGTTGCTGGAGCGTGGGTACTAGTCGGAGATCACAAACAGAGGTTGCTGGAGTGCG
AATCCGACGTTTCCGGAGCATGGGTACTGGTCGGAGATCGCTGTCGAAGGTTGAGGTGCGTGGGGGGAAAACCCCTTTCGATTCCGGCGCCGGAGAGGGAGGAGGGAGGA
GGGTCCTCCCTCCTCCGTCTCCGCGCGCCGGCGTCGGCGAGCGGTGGCCGCCGGCCGCCGGCCACCGAAGATATGAAGAAGAAGAATGAAAGGATGAAGAGGAAGAAGAT
GGAGAAGAAGAAGGGAAGTAAAGAGATGGAGAAAAAATTAAATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTAGACTATCTTAAAATATACAAAGATGCCAATTCAAAAGTTGTGGACCAAGTACCTCCCCACATCAACGATGATCAACCCCCTTTGAGATGGATCCCTCCTCT
AGAGAATTACTGGAAATTAAATGTAGATGTTGCATGGAAGTCGGACCCTGCTTCGACTGGAGTTGGTGTAGTAATCAGGAACCAGCTGGGAGAGATAATTGGAGCAAAAT
CATCATTTGTGAAAGTGGATTACAAAGCTCCTTTGGTTGAAGTTAAAGCTATCTACGAAGGCATTTGTTTTGCCAAAGATCAGGGCTGCTCGAAATTGATTGTGGAAGCT
GATTGTGCCCTAGCAATCAACTTAGTGCCCGACCCTCTCCCTCGTTTGATCCCTCTCTATCTCGCTCTCTCTGATTCGAGCCCAAATCTAGAAGACGGAGATCGTCGCTT
GAGGTTGTTGAAGCGCGAATCCAAAGTTGCTGGAGTGTGGGGCCGCGAATCTGATGTTGCTGGAGCGTGGGTACTAGTCGGAGATCACAAACAGAGGTTGCTGGAGTGCG
AATCCGACGTTTCCGGAGCATGGGTACTGGTCGGAGATCGCTGTCGAAGGTTGAGGTGCGTGGGGGGAAAACCCCTTTCGATTCCGGCGCCGGAGAGGGAGGAGGGAGGA
GGGTCCTCCCTCCTCCGTCTCCGCGCGCCGGCGTCGGCGAGCGGTGGCCGCCGGCCGCCGGCCACCGAAGATATGAAGAAGAAGAATGAAAGGATGAAGAGGAAGAAGAT
GGAGAAGAAGAAGGGAAGTAAAGAGATGGAGAAAAAATTAAATAATTAA
Protein sequenceShow/hide protein sequence
MGVDYLKIYKDANSKVVDQVPPHINDDQPPLRWIPPLENYWKLNVDVAWKSDPASTGVGVVIRNQLGEIIGAKSSFVKVDYKAPLVEVKAIYEGICFAKDQGCSKLIVEA
DCALAINLVPDPLPRLIPLYLALSDSSPNLEDGDRRLRLLKRESKVAGVWGRESDVAGAWVLVGDHKQRLLECESDVSGAWVLVGDRCRRLRCVGGKPLSIPAPEREEGG
GSSLLRLRAPASASGGRRPPATEDMKKKNERMKRKKMEKKKGSKEMEKKLNN