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Lag0015442 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015442
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:13173802..13174110
RNA-Seq ExpressionLag0015442
SyntenyLag0015442
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]4.2e-0443.55Show/hide
Query:  MELEVESDALELVRCLNKDCVDLYEIKVFVEAILDVAPKLGVLSFKHCPRNRNGVAHSIARQ
        +++E+ESD LE+V  +NK  + L E+ + VE I      L +  FKH P   NGVAH IAR+
Subjt:  MELEVESDALELVRCLNKDCVDLYEIKVFVEAILDVAPKLGVLSFKHCPRNRNGVAHSIARQ
TrEMBL top hitse value%identityAlignment
A0A6J1D4B6 uncharacterized protein LOC1110171812.0e-0443.55Show/hide
Query:  MELEVESDALELVRCLNKDCVDLYEIKVFVEAILDVAPKLGVLSFKHCPRNRNGVAHSIARQ
        +++E+ESD LE+V  +NK  + L E+ + VE I      L +  FKH P   NGVAH IAR+
Subjt:  MELEVESDALELVRCLNKDCVDLYEIKVFVEAILDVAPKLGVLSFKHCPRNRNGVAHSIARQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTGAAGTTGAATCTGATGCCTTGGAGCTCGTCCGCTGCTTGAACAAGGATTGTGTAGATTTGTATGAGATCAAGGTTTTTGTTGAAGCCATTTTAGATGTGGC
TCCCAAATTAGGAGTGCTATCTTTCAAGCACTGCCCTAGAAATCGAAATGGGGTGGCTCACTCCATTGCTCGTCAGGACACGTTATGTTATTCTGATTCTAGTTTTTTTG
ATGATGTGCAGGGACTCCTTCCATGCTGGAAGGTCTGTATTGGTTTTGGTCCTCTTACCCCCCTCTTGGTTGATTTTCTTAATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTGAAGTTGAATCTGATGCCTTGGAGCTCGTCCGCTGCTTGAACAAGGATTGTGTAGATTTGTATGAGATCAAGGTTTTTGTTGAAGCCATTTTAGATGTGGC
TCCCAAATTAGGAGTGCTATCTTTCAAGCACTGCCCTAGAAATCGAAATGGGGTGGCTCACTCCATTGCTCGTCAGGACACGTTATGTTATTCTGATTCTAGTTTTTTTG
ATGATGTGCAGGGACTCCTTCCATGCTGGAAGGTCTGTATTGGTTTTGGTCCTCTTACCCCCCTCTTGGTTGATTTTCTTAATTGGTAA
Protein sequenceShow/hide protein sequence
MELEVESDALELVRCLNKDCVDLYEIKVFVEAILDVAPKLGVLSFKHCPRNRNGVAHSIARQDTLCYSDSSFFDDVQGLLPCWKVCIGFGPLTPLLVDFLNW