; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015449 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015449
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:13281865..13282470
RNA-Seq ExpressionLag0015449
SyntenyLag0015449
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]5.8e-5055.17Show/hide
Query:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE
        +Y   +   S K+EF+E E   + HPHNDALV+TL IANAKVHRILVDGGSS D+ S TA+ A+ LG + L+ SLT L+GFGGE++ P+G +ELP+TF  
Subjt:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR
          +++TRM++FLVVD   +YN IL RPT+H L+ + STYHQ +KFPT  GVG + GEQ++SRECY+ ++R  D+
Subjt:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]5.5e-4852.72Show/hide
Query:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE
        +Y   +++   K+EF E EV  I HPHNDALV+ L IANAKVH ILVDGGSS D++S TA+  + LG   L+ S   LVGFGGE V P G +ELPVTFG 
Subjt:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDRKVQATSASGD
        G +++T+M++FLVVD   + N ILGRPT+H LK + S YHQ +KFPT  G+G + GEQ++SRECY+ +++  D+     S +GD
Subjt:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDRKVQATSASGD

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]8.4e-4956.32Show/hide
Query:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE
        +Y   +      +EF+E E   + HPHNDALV+TL IAN KVHRILVDGGSSAD++S TA+ A+ LG   L+ S   LVGFGGE+V   G +ELPVTFG 
Subjt:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR
        G ++VT+M++FLVV+   +YN ILGRPT+H LK + STYHQ  KFPT  GVG + GEQ++SRECY  ++R+ DR
Subjt:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]4.6e-4754.71Show/hide
Query:  LLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGEGLQT
        ++++   KLEF+E E   + HPHNDALV+TL IANAKVHRILVDGGSS  ++S TA+ A+ LG   L+ S   LVGFGGE+V P G +ELPV FG G ++
Subjt:  LLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGEGLQT

Query:  VTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR
        + +M++FLVV    +YNVILGRP +H LK + STYHQ +KFPT  G+G + GEQ++ RECY  +++  DR
Subjt:  VTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]2.7e-4754.6Show/hide
Query:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE
        +Y   +   S  +EF+E E   + HPHNDALV+TL IAN KVHRILVDGGSSAD++S T +  + LG   L+ S   L+GFG E+V P G +EL VTFG 
Subjt:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR
        G ++VT+M++FLVVD   +YN ILGR T+H LK + STYHQ +KFPT  GVG + GEQ++SRECY+ ++R  DR
Subjt:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.8e-5055.17Show/hide
Query:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE
        +Y   +   S K+EF+E E   + HPHNDALV+TL IANAKVHRILVDGGSS D+ S TA+ A+ LG + L+ SLT L+GFGGE++ P+G +ELP+TF  
Subjt:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR
          +++TRM++FLVVD   +YN IL RPT+H L+ + STYHQ +KFPT  GVG + GEQ++SRECY+ ++R  D+
Subjt:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR

A0A6J1DAK4 uncharacterized protein LOC1110189022.6e-4852.72Show/hide
Query:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE
        +Y   +++   K+EF E EV  I HPHNDALV+ L IANAKVH ILVDGGSS D++S TA+  + LG   L+ S   LVGFGGE V P G +ELPVTFG 
Subjt:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDRKVQATSASGD
        G +++T+M++FLVVD   + N ILGRPT+H LK + S YHQ +KFPT  G+G + GEQ++SRECY+ +++  D+     S +GD
Subjt:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDRKVQATSASGD

A0A6J1DP33 uncharacterized protein LOC1110228862.2e-4754.71Show/hide
Query:  LLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGEGLQT
        ++++   KLEF+E E   + HPHNDALV+TL IANAKVHRILVDGGSS  ++S TA+ A+ LG   L+ S   LVGFGGE+V P G +ELPV FG G ++
Subjt:  LLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGEGLQT

Query:  VTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR
        + +M++FLVV    +YNVILGRP +H LK + STYHQ +KFPT  G+G + GEQ++ RECY  +++  DR
Subjt:  VTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR

A0A6J1DQY2 uncharacterized protein LOC1110223214.1e-4956.32Show/hide
Query:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE
        +Y   +      +EF+E E   + HPHNDALV+TL IAN KVHRILVDGGSSAD++S TA+ A+ LG   L+ S   LVGFGGE+V   G +ELPVTFG 
Subjt:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR
        G ++VT+M++FLVV+   +YN ILGRPT+H LK + STYHQ  KFPT  GVG + GEQ++SRECY  ++R+ DR
Subjt:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR

A0A6J1DXV4 uncharacterized protein LOC1110251471.3e-4754.6Show/hide
Query:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE
        +Y   +   S  +EF+E E   + HPHNDALV+TL IAN KVHRILVDGGSSAD++S T +  + LG   L+ S   L+GFG E+V P G +EL VTFG 
Subjt:  MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR
        G ++VT+M++FLVVD   +YN ILGR T+H LK + STYHQ +KFPT  GVG + GEQ++SRECY+ ++R  DR
Subjt:  GLQTVTRMINFLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCGCTCCTACTCGATAAAAACTCACCAAAGTTAGAGTTTACAGAGAAAGAGGTCGCGGGGATACATCATCCGCACAACGATGCCCTGGTGGTCACTCTAACGAT
TGCCAACGCAAAAGTTCATCGGATCCTCGTTGATGGGGGGAGTTCTGCTGATGTACTCTCAACCACTGCGTTCGACGCCTTGAAGCTGGGAAGCGATCGCCTGAGGCCGA
GCCTCACGCAGCTGGTGGGGTTTGGCGGAGAAAAAGTAAGCCCAAGAGGAAGCGTCGAACTGCCAGTGACGTTTGGGGAAGGACTGCAGACAGTAACAAGAATGATCAAC
TTTCTAGTGGTAGACTGTGTCCCAGCATATAATGTCATCTTGGGACGACCCACCCTACATGGACTTAAAGTTGTAGCGTCAACCTACCACCAAGTCCTGAAATTCCCAAC
CGAAGAAGGTGTAGGAGCAGTGTATGGCGAGCAAAAGATATCGAGGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGAAAGGTTCAAGCAACGTCGGCCTCGGGAG
ATGGTCGAGGCCGAGCATTTGAGGGATCAAGTTATCCCCTTCCAATTGAGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCGCTCCTACTCGATAAAAACTCACCAAAGTTAGAGTTTACAGAGAAAGAGGTCGCGGGGATACATCATCCGCACAACGATGCCCTGGTGGTCACTCTAACGAT
TGCCAACGCAAAAGTTCATCGGATCCTCGTTGATGGGGGGAGTTCTGCTGATGTACTCTCAACCACTGCGTTCGACGCCTTGAAGCTGGGAAGCGATCGCCTGAGGCCGA
GCCTCACGCAGCTGGTGGGGTTTGGCGGAGAAAAAGTAAGCCCAAGAGGAAGCGTCGAACTGCCAGTGACGTTTGGGGAAGGACTGCAGACAGTAACAAGAATGATCAAC
TTTCTAGTGGTAGACTGTGTCCCAGCATATAATGTCATCTTGGGACGACCCACCCTACATGGACTTAAAGTTGTAGCGTCAACCTACCACCAAGTCCTGAAATTCCCAAC
CGAAGAAGGTGTAGGAGCAGTGTATGGCGAGCAAAAGATATCGAGGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGAAAGGTTCAAGCAACGTCGGCCTCGGGAG
ATGGTCGAGGCCGAGCATTTGAGGGATCAAGTTATCCCCTTCCAATTGAGCATTGA
Protein sequenceShow/hide protein sequence
MYSLLLDKNSPKLEFTEKEVAGIHHPHNDALVVTLTIANAKVHRILVDGGSSADVLSTTAFDALKLGSDRLRPSLTQLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMIN
FLVVDCVPAYNVILGRPTLHGLKVVASTYHQVLKFPTEEGVGAVYGEQKISRECYFMALRNIDRKVQATSASGDGRGRAFEGSSYPLPIEH