; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015458 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015458
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:13484698..13485419
RNA-Seq ExpressionLag0015458
SyntenyLag0015458
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033299.1 uncharacterized protein E6C27_scaffold845G001100 [Cucumis melo var. makuwa]9.6e-3548.31Show/hide
Query:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYR
        +TTN+SES+N+ LK++RELP+I  LESIR L+Q+WFYER+T  +FQRT L  +AE+M+R SL +SR+M+                 RNL    Y+ +FY 
Subjt:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYR

Query:  LFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI
        + NL+ LY K  R IG V+Q  N     +D +LP   KR  G+PKKKR  S +EK+A   C  CGK GHN RSCK PI
Subjt:  LFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI

KAA0037179.1 uncharacterized protein E6C27_scaffold379G00920 [Cucumis melo var. makuwa]1.4e-3347.65Show/hide
Query:  INAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYRLFNLVQLY
        +N+ LK++RELP+I LLESIR L+Q+WFYER+T  +FQRT L  +AE+M+R SL +SR+M+                 RNL    Y+ +FY + NL+ LY
Subjt:  INAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYRLFNLVQLY

Query:  NKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI
         K  RPIG+V+Q  N     +D +L    KR AG+PKKKR  S +EK+   +C  CGK GHN RSCK PI
Subjt:  NKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]2.3e-3648.88Show/hide
Query:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYR
        +TTN+SES+N+ LK++RELP+I LLES   L+Q+WFYER+T  +FQRT L  +AE+M+R SL +SR+M+                 RNL    Y+ +FY 
Subjt:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYR

Query:  LFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI
        + NL+ LY K  RPIG V+Q  N     +D +LP   KR AG+PKKKR  S +EK+A   C  CGK GHN RSCK PI
Subjt:  LFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]6.2e-3442.11Show/hide
Query:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-------------------------------
        +TTN+SES+N+ LK++RELP+I LLESIR L+Q+WFYER+T  +FQRT L  +AE+M+R SL +SR+M+                               
Subjt:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-------------------------------

Query:  -----------------RNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGH
                         RNL    Y+ +FY + NL+ LY K  RPIG V+Q  N     +D +LP   KR AG+ +KKR  S +EK+AF +C  CGK GH
Subjt:  -----------------RNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGH

Query:  NRRSCKNPI
        N RSCK PI
Subjt:  NRRSCKNPI

XP_022157216.1 uncharacterized protein LOC111023978 [Momordica charantia]3.6e-3440.87Show/hide
Query:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-------------------------------
        MTTN+SESIN+   + RELP+I LL++IRDLMQRWFYER++F ++Q+ D+ PW  N LRSSL ESRTMD                               
Subjt:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-------------------------------

Query:  -----------------RNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGH
                         R LE  S+ H+FY +  L  LY+ +V PIG ++         D  +LP   KR AG+P+KKR++S +E     +CG C K+GH
Subjt:  -----------------RNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGH

Query:  NRRSCKNP
        NRR CKNP
Subjt:  NRRSCKNP

TrEMBL top hitse value%identityAlignment
A0A5A7SVT9 CCHC-type domain-containing protein4.6e-3548.31Show/hide
Query:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYR
        +TTN+SES+N+ LK++RELP+I  LESIR L+Q+WFYER+T  +FQRT L  +AE+M+R SL +SR+M+                 RNL    Y+ +FY 
Subjt:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYR

Query:  LFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI
        + NL+ LY K  R IG V+Q  N     +D +LP   KR  G+PKKKR  S +EK+A   C  CGK GHN RSCK PI
Subjt:  LFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI

A0A5A7T731 CCHC-type domain-containing protein6.7e-3447.65Show/hide
Query:  INAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYRLFNLVQLY
        +N+ LK++RELP+I LLESIR L+Q+WFYER+T  +FQRT L  +AE+M+R SL +SR+M+                 RNL    Y+ +FY + NL+ LY
Subjt:  INAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYRLFNLVQLY

Query:  NKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI
         K  RPIG+V+Q  N     +D +L    KR AG+PKKKR  S +EK+   +C  CGK GHN RSCK PI
Subjt:  NKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI

A0A5A7V1Z6 CCHC-type domain-containing protein1.1e-3648.88Show/hide
Query:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYR
        +TTN+SES+N+ LK++RELP+I LLES   L+Q+WFYER+T  +FQRT L  +AE+M+R SL +SR+M+                 RNL    Y+ +FY 
Subjt:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-----------------RNLEFQSYSHEFYR

Query:  LFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI
        + NL+ LY K  RPIG V+Q  N     +D +LP   KR AG+PKKKR  S +EK+A   C  CGK GHN RSCK PI
Subjt:  LFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPI

A0A5D3E198 MuDRA-like transposase3.0e-3442.11Show/hide
Query:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-------------------------------
        +TTN+SES+N+ LK++RELP+I LLESIR L+Q+WFYER+T  +FQRT L  +AE+M+R SL +SR+M+                               
Subjt:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-------------------------------

Query:  -----------------RNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGH
                         RNL    Y+ +FY + NL+ LY K  RPIG V+Q  N     +D +LP   KR AG+ +KKR  S +EK+AF +C  CGK GH
Subjt:  -----------------RNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGH

Query:  NRRSCKNPI
        N RSCK PI
Subjt:  NRRSCKNPI

A0A6J1DXB4 uncharacterized protein LOC1110239781.8e-3440.87Show/hide
Query:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-------------------------------
        MTTN+SESIN+   + RELP+I LL++IRDLMQRWFYER++F ++Q+ D+ PW  N LRSSL ESRTMD                               
Subjt:  MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMD-------------------------------

Query:  -----------------RNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGH
                         R LE  S+ H+FY +  L  LY+ +V PIG ++         D  +LP   KR AG+P+KKR++S +E     +CG C K+GH
Subjt:  -----------------RNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVVSDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGH

Query:  NRRSCKNP
        NRR CKNP
Subjt:  NRRSCKNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACCAACGTATCCGAGAGCATAAATGCAATCTTGAAGGATGAACGCGAACTTCCTATTATTCCTCTTCTTGAATCTATACGAGATTTGATGCAAAGATGGTTTTA
TGAACGTCAGACTTTTTCAAATTTTCAACGTACAGATTTATGTCCATGGGCAGAGAATATGCTTCGATCTTCATTAAATGAAAGTCGGACAATGGATAGAAATCTGGAAT
TTCAATCATATTCACATGAGTTCTATCGACTTTTCAATTTAGTTCAGTTATACAATAAAGACGTTCGTCCGATTGGCAATGTTGACCAATTCGCCAATTACACTGTTGTT
AGTGATGATCCTGTTCTCCCACTCACAACAAAACGATTAGCTGGTCAACCTAAAAAGAAGAGGATTTTGTCCTGCATTGAAAAGAGGGCATTTAAAAAGTGTGGGCATTG
TGGAAAAGTTGGACACAACCGCAGGTCCTGCAAAAACCCCATACCTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACCAACGTATCCGAGAGCATAAATGCAATCTTGAAGGATGAACGCGAACTTCCTATTATTCCTCTTCTTGAATCTATACGAGATTTGATGCAAAGATGGTTTTA
TGAACGTCAGACTTTTTCAAATTTTCAACGTACAGATTTATGTCCATGGGCAGAGAATATGCTTCGATCTTCATTAAATGAAAGTCGGACAATGGATAGAAATCTGGAAT
TTCAATCATATTCACATGAGTTCTATCGACTTTTCAATTTAGTTCAGTTATACAATAAAGACGTTCGTCCGATTGGCAATGTTGACCAATTCGCCAATTACACTGTTGTT
AGTGATGATCCTGTTCTCCCACTCACAACAAAACGATTAGCTGGTCAACCTAAAAAGAAGAGGATTTTGTCCTGCATTGAAAAGAGGGCATTTAAAAAGTGTGGGCATTG
TGGAAAAGTTGGACACAACCGCAGGTCCTGCAAAAACCCCATACCTAATTGA
Protein sequenceShow/hide protein sequence
MTTNVSESINAILKDERELPIIPLLESIRDLMQRWFYERQTFSNFQRTDLCPWAENMLRSSLNESRTMDRNLEFQSYSHEFYRLFNLVQLYNKDVRPIGNVDQFANYTVV
SDDPVLPLTTKRLAGQPKKKRILSCIEKRAFKKCGHCGKVGHNRRSCKNPIPN