; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015469 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015469
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:13703229..13705600
RNA-Seq ExpressionLag0015469
SyntenyLag0015469
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]1.1e-2525.17Show/hide
Query:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------
        WG+ELL +G RWR+G+G    +Y   WLP     +I S P L L++ + +LF+ SG WN  +L+ IF                  ++ LI +        
Subjt:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------

Query:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF
                                                                   L  R ++ + +C  C    E  LH  W C   K +W  S +
Subjt:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF

Query:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS--------RDLCAYSSDYLSAFHV-------------GGRRCPAGDC
          + + +    F E   A++   +G +  L     W +WN RN+  + G+S++          L    SD  +  H              G R  PA   
Subjt:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS--------RDLCAYSSDYLSAFHV-------------GGRRCPAGDC

Query:  YRLNRGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLR-LVKILHGELHD------VSEVGLLMDVIRGIL
         +     RG G V+   +GE FMAAC+  + + +     E  A  +G++ A  +GF + ++E D+   L  I   E ++      + EV  L++  R ++
Subjt:  YRLNRGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLR-LVKILHGELHD------VSEVGLLMDVIRGIL

Query:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS
          W       TPR GNKVAH LA  AF   + V W+EE PS +  VL  DV+S
Subjt:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]3.4e-2724.28Show/hide
Query:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------
        WG+ELL +G RWR+GNG    +Y   WLP     +I S P L L++ + +LF+ SG WN  +L+ IF                  ++ LI +        
Subjt:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------

Query:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF
                                                                   L  R ++ + +C  C    E  LH  W C   K +W  S +
Subjt:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF

Query:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS-----RDLCAYSSDYLSAFHVG---------------GRRCPAGDCY
          + + +    F E   A++   +G +  L     W +WN RN+  + G+S++       +   + ++ +A ++                G R P    Y
Subjt:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS-----RDLCAYSSDYLSAFHVG---------------GRRCPAGDCY

Query:  RLN--------RGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGIL
        ++N           RG G V+   +GE FMAAC+  +Q+ +     E  A  +G++ A  +GF   V+E D+   +  +          GLL++ +  +L
Subjt:  RLN--------RGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGIL

Query:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS
          +      +TPR GNKVAH LA  AF   + V W+EE P  +  VL  DV+S
Subjt:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS

XP_022149385.1 uncharacterized protein LOC111017816 [Momordica charantia]1.8e-2330.9Show/hide
Query:  LWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIFNE---SLIVNL---------------------
        L GR +L  G RWR+G+G   PIYGSNW+P + +L + S P L L+S +S L S SGGWNE ++R  F+E   SLI+ +                     
Subjt:  LWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIFNE---SLIVNL---------------------

Query:  -LKRGLSVSSLCVLC--------DDDVEDCLHLFWNCPVVKSMWLGSKFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQS
         +K    V    +LC        D   ED LH  W C VV  +W  S+               F+   K+ L   D   + +  W++W+LRN+  W    
Subjt:  -LKRGLSVSSLCVLC--------DDDVEDCLHLFWNCPVVKSMWLGSKFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQS

Query:  DSRDLCAYSSDYLSAFHVGGRRCPAGDCYRLN-RGKRGGGCVLH---GDD--GEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLG
         SR +      + +AF    RR  A     ++        C+L    G D  G+V ++A   +    +VDLAE  A   G+ LAR +G
Subjt:  DSRDLCAYSSDYLSAFHVGGRRCPAGDCYRLN-RGKRGGGCVLH---GDD--GEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLG

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.0e-3125.22Show/hide
Query:  LWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFS-MSGGWNEAMLR----------------------------------
        LWGR+LL +G RWRIGNG    IYG NW+PN+ +L+I S+P L L S +S L     GGW   ++R                                  
Subjt:  LWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFS-MSGGWNEAMLR----------------------------------

Query:  ---------AIFNESLI------------------------------------------VNLLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGS
                 A+ N   +                                           NL KRG+ +++ C  C  + ED +HLFW C   +++W+ S
Subjt:  ---------AIFNESLI------------------------------------------VNLLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGS

Query:  KFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS-----RDLCAYSSDYLSAFH------VGGR---------RCPAGD
        KF  L            +    + L+  DFE + +  W +WN RN  ++   + +      +L  +++ Y   F       + GR         + P   
Subjt:  KFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS-----RDLCAYSSDYLSAFH------VGGR---------RCPAGD

Query:  CYRLNRG--------KRGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGI
         Y++N            G G ++H D G+V  AA   L++  SVD+AE  A  +G+QLA ++G                +H  L D+SE G ++   +  
Subjt:  CYRLNRG--------KRGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGI

Query:  LRPWDNGKVLFTPRQGNKVAHVLASLAFSYVD-RVWLEEWPSKISDVL
             +    F  R+GNK AH+LA  A    +  +W+E+WP ++   L
Subjt:  LRPWDNGKVLFTPRQGNKVAHVLASLAFSYVD-RVWLEEWPSKISDVL

XP_023919081.1 uncharacterized protein LOC112030645 [Quercus suber]1.8e-2324.31Show/hide
Query:  VELKKQEITSGLW-----GRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELF--SMSGGWNEAMLRAIF--NESLIV------
        +E K+    S  W     GR +L+RGCRWR+GNGR   I+ S WLP +   ++ S  + S+     E+     + GWN +++  IF   E+ ++      
Subjt:  VELKKQEITSGLW-----GRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELF--SMSGGWNEAMLRAIF--NESLIV------

Query:  -------------------------------------------------------------NLLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLG
                                                                     NL++R +  + LC  C    E  LH  W+C  +  +W  
Subjt:  -------------------------------------------------------------NLLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLG

Query:  SKFALLHQSFSHFRFEEFIG-AMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQS-DSRDLCAYSSDYLSAF-------HVGGRRCPAGDCYR--LNRGK
                S + F F+E +   +K++      EL  +  W++WN RN +     S  S  +   + + L  F       H      P    ++       
Subjt:  SKFALLHQSFSHFRFEEFIG-AMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQS-DSRDLCAYSSDYLSAF-------HVGGRRCPAGDCYR--LNRGK

Query:  RGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGILRPWDNGKVLFTPRQG
         G G V+   +G V  +    +   +S    E  A+   ++ A  LGF   ++ETDSL LVK L  +   +S VGL++D IR  +  ++        R+G
Subjt:  RGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGILRPWDNGKVLFTPRQG

Query:  NKVAHVLASLAFSYVD-RVWLEEWPSKISDVLRGDV
        N VAH LA  A S  D  VW+E+ P  +  V+  D+
Subjt:  NKVAHVLASLAFSYVD-RVWLEEWPSKISDVLRGDV

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein5.3e-2625.17Show/hide
Query:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------
        WG+ELL +G RWR+G+G    +Y   WLP     +I S P L L++ + +LF+ SG WN  +L+ IF                  ++ LI +        
Subjt:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------

Query:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF
                                                                   L  R ++ + +C  C    E  LH  W C   K +W  S +
Subjt:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF

Query:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS--------RDLCAYSSDYLSAFHV-------------GGRRCPAGDC
          + + +    F E   A++   +G +  L     W +WN RN+  + G+S++          L    SD  +  H              G R  PA   
Subjt:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS--------RDLCAYSSDYLSAFHV-------------GGRRCPAGDC

Query:  YRLNRGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLR-LVKILHGELHD------VSEVGLLMDVIRGIL
         +     RG G V+   +GE FMAAC+  + + +     E  A  +G++ A  +GF + ++E D+   L  I   E ++      + EV  L++  R ++
Subjt:  YRLNRGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLR-LVKILHGELHD------VSEVGLLMDVIRGIL

Query:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS
          W       TPR GNKVAH LA  AF   + V W+EE PS +  VL  DV+S
Subjt:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS

A0A5E4FZN9 PREDICTED: retrotransposon1.7e-2724.28Show/hide
Query:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------
        WG+ELL +G RWR+GNG    +Y   WLP     +I S P L L++ + +LF+ SG WN  +L+ IF                  ++ LI +        
Subjt:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------

Query:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF
                                                                   L  R ++ + +C  C    E  LH  W C   K +W  S +
Subjt:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF

Query:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS-----RDLCAYSSDYLSAFHVG---------------GRRCPAGDCY
          + + +    F E   A++   +G +  L     W +WN RN+  + G+S++       +   + ++ +A ++                G R P    Y
Subjt:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS-----RDLCAYSSDYLSAFHVG---------------GRRCPAGDCY

Query:  RLN--------RGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGIL
        ++N           RG G V+   +GE FMAAC+  +Q+ +     E  A  +G++ A  +GF   V+E D+   +  +          GLL++ +  +L
Subjt:  RLN--------RGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGIL

Query:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS
          +      +TPR GNKVAH LA  AF   + V W+EE P  +  VL  DV+S
Subjt:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS

A0A6J1D5K1 uncharacterized protein LOC1110178168.5e-2430.9Show/hide
Query:  LWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIFNE---SLIVNL---------------------
        L GR +L  G RWR+G+G   PIYGSNW+P + +L + S P L L+S +S L S SGGWNE ++R  F+E   SLI+ +                     
Subjt:  LWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIFNE---SLIVNL---------------------

Query:  -LKRGLSVSSLCVLC--------DDDVEDCLHLFWNCPVVKSMWLGSKFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQS
         +K    V    +LC        D   ED LH  W C VV  +W  S+               F+   K+ L   D   + +  W++W+LRN+  W    
Subjt:  -LKRGLSVSSLCVLC--------DDDVEDCLHLFWNCPVVKSMWLGSKFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQS

Query:  DSRDLCAYSSDYLSAFHVGGRRCPAGDCYRLN-RGKRGGGCVLH---GDD--GEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLG
         SR +      + +AF    RR  A     ++        C+L    G D  G+V ++A   +    +VDLAE  A   G+ LAR +G
Subjt:  DSRDLCAYSSDYLSAFHVGGRRCPAGDCYRLN-RGKRGGGCVLH---GDD--GEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLG

A0A6J1DAR4 uncharacterized protein LOC1110189545.0e-3225.22Show/hide
Query:  LWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFS-MSGGWNEAMLR----------------------------------
        LWGR+LL +G RWRIGNG    IYG NW+PN+ +L+I S+P L L S +S L     GGW   ++R                                  
Subjt:  LWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFS-MSGGWNEAMLR----------------------------------

Query:  ---------AIFNESLI------------------------------------------VNLLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGS
                 A+ N   +                                           NL KRG+ +++ C  C  + ED +HLFW C   +++W+ S
Subjt:  ---------AIFNESLI------------------------------------------VNLLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGS

Query:  KFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS-----RDLCAYSSDYLSAFH------VGGR---------RCPAGD
        KF  L            +    + L+  DFE + +  W +WN RN  ++   + +      +L  +++ Y   F       + GR         + P   
Subjt:  KFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS-----RDLCAYSSDYLSAFH------VGGR---------RCPAGD

Query:  CYRLNRG--------KRGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGI
         Y++N            G G ++H D G+V  AA   L++  SVD+AE  A  +G+QLA ++G                +H  L D+SE G ++   +  
Subjt:  CYRLNRG--------KRGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGI

Query:  LRPWDNGKVLFTPRQGNKVAHVLASLAFSYVD-RVWLEEWPSKISDVL
             +    F  R+GNK AH+LA  A    +  +W+E+WP ++   L
Subjt:  LRPWDNGKVLFTPRQGNKVAHVLASLAFSYVD-RVWLEEWPSKISDVL

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)5.3e-2625.17Show/hide
Query:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------
        WG+ELL +G RWR+G+G    +Y   WLP     +I S P L L++ + +LF+ SG WN  +L+ IF                  ++ LI +        
Subjt:  WGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIF------------------NESLIVN--------

Query:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF
                                                                   L  R ++ + +C  C    E  LH  W C   K +W  S +
Subjt:  -----------------------------------------------------------LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF

Query:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS--------RDLCAYSSDYLSAFHV-------------GGRRCPAGDC
          + + +    F E   A++   +G +  L     W +WN RN+  + G+S++          L    SD  +  H              G R  PA   
Subjt:  ALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDS--------RDLCAYSSDYLSAFHV-------------GGRRCPAGDC

Query:  YRLNRGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLR-LVKILHGELHD------VSEVGLLMDVIRGIL
         +     RG G V+   +GE FMAAC+  + + +     E  A  +G++ A  +GF + ++E D+   L  I   E ++      + EV  L++  R ++
Subjt:  YRLNRGKRGGGCVLHGDDGEVFMAACL-SLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLR-LVKILHGELHD------VSEVGLLMDVIRGIL

Query:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS
          W       TPR GNKVAH LA  AF   + V W+EE PS +  VL  DV+S
Subjt:  RPWDNGKVLFTPRQGNKVAHVLASLAFSYVDRV-WLEEWPSKISDVLRGDVVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.2e-0722.99Show/hide
Query:  RGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF-ALLHQSFSHFRFEEFIGAMKDKLTGPDF----ELVVIFWWSVWNLRNNLSWGGQ-------
        R L   + CV C D  E   HL + C   + +W  S   A     ++   +      +  ++  P       LV    W +W  RN L + G+       
Subjt:  RGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKF-ALLHQSFSHFRFEEFIGAMKDKLTGPDF----ELVVIFWWSVWNLRNNLSWGGQ-------

Query:  -----------SDSRDLCAYSSDYLSAFHVGGR---------RCPAGDCYRLNRGKRGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLAR
                   S  R+L   +S      ++  +         +C     ++L   + G G +L  + G V      +L    +V  AE  A+   V    
Subjt:  -----------SDSRDLCAYSSDYLSAFHVGGR---------RCPAGDCYRLNRGKRGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLAR

Query:  QLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGILRPWDNGKVLFTPRQGNKVAHVLA--SLAFSYVD
        +  +   + E+D+  LV +L+ +    +    L D I+ +L  ++  K  FTPR GNKVA  +A  S++FS  D
Subjt:  QLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGILRPWDNGKVLFTPRQGNKVAHVLA--SLAFSYVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGGGCCTTAGGTGCCGAAGTCGAATTCCGAATCCTGGGCCTAGGGCATTACATCATTAGAGGATCAGTGGAACTTAAGAAACAAGAAATAACTTCAGGGTTATG
GGGGCGTGAGCTCTTAGTTCGTGGATGTCGCTGGAGGATTGGTAATGGGCGTGTTACGCCCATCTATGGCTCGAATTGGCTGCCAAATGAGTTCTCACTTCAAATACAGT
CGGCTCCAGTACTTTCCCTTGCTAGTACGATGAGTGAGTTGTTCTCTATGTCTGGTGGATGGAATGAGGCTATGCTCAGAGCCATTTTCAATGAGAGTCTGATTGTAAAC
CTTCTCAAACGTGGACTCAGTGTATCTAGTCTGTGTGTTTTGTGCGATGATGATGTAGAGGATTGTCTCCATCTGTTCTGGAACTGCCCTGTGGTCAAAAGTATGTGGTT
AGGCTCCAAATTTGCTCTCCTCCACCAATCCTTTTCCCATTTCAGGTTTGAGGAATTCATTGGGGCGATGAAGGACAAACTTACAGGGCCAGATTTTGAGCTTGTGGTCA
TTTTTTGGTGGTCCGTGTGGAATCTTCGAAATAACCTGAGTTGGGGTGGCCAGTCAGACAGTCGAGATCTTTGTGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTT
GGTGGGAGGCGTTGTCCAGCAGGGGACTGTTACAGACTCAATCGAGGGAAGCGAGGGGGTGGTTGTGTGCTGCATGGGGATGATGGTGAGGTCTTTATGGCAGCCTGTTT
GAGCTTACAGAGTTGTTGGAGTGTGGATTTGGCTGAGGGTTGGGCTGTGTATAAAGGGGTCCAACTTGCTCGACAGTTGGGGTTTGCAGAATTTGTGGTGGAGACTGACT
CCCTGAGGCTGGTCAAAATCCTACATGGTGAGCTGCATGATGTGTCGGAAGTGGGGTTGCTGATGGATGTCATCCGAGGAATCCTCCGTCCTTGGGACAACGGTAAGGTT
TTGTTTACACCACGTCAGGGAAACAAGGTGGCGCATGTTCTGGCTAGCTTGGCCTTTTCATATGTTGACCGTGTTTGGCTAGAAGAGTGGCCTAGCAAAATCTCGGACGT
CCTGAGGGGTGATGTTGTTTCAGCTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGGGCCTTAGGTGCCGAAGTCGAATTCCGAATCCTGGGCCTAGGGCATTACATCATTAGAGGATCAGTGGAACTTAAGAAACAAGAAATAACTTCAGGGTTATG
GGGGCGTGAGCTCTTAGTTCGTGGATGTCGCTGGAGGATTGGTAATGGGCGTGTTACGCCCATCTATGGCTCGAATTGGCTGCCAAATGAGTTCTCACTTCAAATACAGT
CGGCTCCAGTACTTTCCCTTGCTAGTACGATGAGTGAGTTGTTCTCTATGTCTGGTGGATGGAATGAGGCTATGCTCAGAGCCATTTTCAATGAGAGTCTGATTGTAAAC
CTTCTCAAACGTGGACTCAGTGTATCTAGTCTGTGTGTTTTGTGCGATGATGATGTAGAGGATTGTCTCCATCTGTTCTGGAACTGCCCTGTGGTCAAAAGTATGTGGTT
AGGCTCCAAATTTGCTCTCCTCCACCAATCCTTTTCCCATTTCAGGTTTGAGGAATTCATTGGGGCGATGAAGGACAAACTTACAGGGCCAGATTTTGAGCTTGTGGTCA
TTTTTTGGTGGTCCGTGTGGAATCTTCGAAATAACCTGAGTTGGGGTGGCCAGTCAGACAGTCGAGATCTTTGTGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTT
GGTGGGAGGCGTTGTCCAGCAGGGGACTGTTACAGACTCAATCGAGGGAAGCGAGGGGGTGGTTGTGTGCTGCATGGGGATGATGGTGAGGTCTTTATGGCAGCCTGTTT
GAGCTTACAGAGTTGTTGGAGTGTGGATTTGGCTGAGGGTTGGGCTGTGTATAAAGGGGTCCAACTTGCTCGACAGTTGGGGTTTGCAGAATTTGTGGTGGAGACTGACT
CCCTGAGGCTGGTCAAAATCCTACATGGTGAGCTGCATGATGTGTCGGAAGTGGGGTTGCTGATGGATGTCATCCGAGGAATCCTCCGTCCTTGGGACAACGGTAAGGTT
TTGTTTACACCACGTCAGGGAAACAAGGTGGCGCATGTTCTGGCTAGCTTGGCCTTTTCATATGTTGACCGTGTTTGGCTAGAAGAGTGGCCTAGCAAAATCTCGGACGT
CCTGAGGGGTGATGTTGTTTCAGCTGTGTGA
Protein sequenceShow/hide protein sequence
MLGALGAEVEFRILGLGHYIIRGSVELKKQEITSGLWGRELLVRGCRWRIGNGRVTPIYGSNWLPNEFSLQIQSAPVLSLASTMSELFSMSGGWNEAMLRAIFNESLIVN
LLKRGLSVSSLCVLCDDDVEDCLHLFWNCPVVKSMWLGSKFALLHQSFSHFRFEEFIGAMKDKLTGPDFELVVIFWWSVWNLRNNLSWGGQSDSRDLCAYSSDYLSAFHV
GGRRCPAGDCYRLNRGKRGGGCVLHGDDGEVFMAACLSLQSCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHDVSEVGLLMDVIRGILRPWDNGKV
LFTPRQGNKVAHVLASLAFSYVDRVWLEEWPSKISDVLRGDVVSAV