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Lag0015470 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015470
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr12:13713502..13714365
RNA-Seq ExpressionLag0015470
SyntenyLag0015470
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW15416.1 hypothetical protein CK203_082664 [Vitis vinifera]3.2e-1150Show/hide
Query:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLGV---GSATKVPHRLDK
        VY+S S A ++GL SQLQ+ +K+ +++S+YLA+IK++ DK+SA+GEPLSYRD L Y L GL     G  T + +R +K
Subjt:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLGV---GSATKVPHRLDK

RVW99863.1 hypothetical protein CK203_029197 [Vitis vinifera]3.2e-1150Show/hide
Query:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLGV---GSATKVPHRLDK
        VY+S S A ++GL SQLQ+ +K+ +++S+YLA+IK++ DK+SA+GEPLSYRD L Y L GL     G  T + +R +K
Subjt:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLGV---GSATKVPHRLDK

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]1.6e-1569.35Show/hide
Query:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG
        VY+S + ARIMGL+++LQ  RKD  SVSQYLA+IK+I DKF+A+GEPLSYRDHLA++L+GLG
Subjt:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG

XP_038887133.1 uncharacterized protein LOC120077323 [Benincasa hispida]6.6e-1779.03Show/hide
Query:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG
        VYESSS A IMG  SQLQK +KD L+VSQYLAQIKD+ D F+AIGEPLSYRDHL+YILEGLG
Subjt:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG

XP_038891713.1 uncharacterized protein LOC120081111 [Benincasa hispida]7.1e-1167.31Show/hide
Query:  MGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG
        M L+++LQK RKD LS+SQYL+QIKD+ DKFS +GE +SYRDHL +IL+GLG
Subjt:  MGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG

TrEMBL top hitse value%identityAlignment
A0A438BWQ3 Uncharacterized protein1.5e-1150Show/hide
Query:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLGV---GSATKVPHRLDK
        VY+S S A ++GL SQLQ+ +K+ +++S+YLA+IK++ DK+SA+GEPLSYRD L Y L GL     G  T + +R +K
Subjt:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLGV---GSATKVPHRLDK

A0A438FD18 Retrovirus-related Pol polyprotein from transposon RE11.0e-1053.12Show/hide
Query:  VGVVYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGL
        + +VY+S S A ++GL SQLQK +K+ +++S+YLA+IK + DK+SA+GEPLSY+D L + L GL
Subjt:  VGVVYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGL

A0A438IT10 Uncharacterized protein1.5e-1150Show/hide
Query:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLGV---GSATKVPHRLDK
        VY+S S A ++GL SQLQ+ +K+ +++S+YLA+IK++ DK+SA+GEPLSYRD L Y L GL     G  T + +R +K
Subjt:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLGV---GSATKVPHRLDK

A0A5C7I9Y1 Uncharacterized protein4.5e-1159.02Show/hide
Query:  YESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG
        +ES+S ARI+ L+SQL   RK+  +++QYL Q KDI DKF+ +GEPLSYR HL Y  EGLG
Subjt:  YESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG

A0A6J1DQX7 uncharacterized protein LOC1110223157.9e-1669.35Show/hide
Query:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG
        VY+S + ARIMGL+++LQ  RKD  SVSQYLA+IK+I DKF+A+GEPLSYRDHLA++L+GLG
Subjt:  VYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIKDITDKFSAIGEPLSYRDHLAYILEGLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGGTGTGTCTTATCTTCTAGTTCTACGACAGCTACTCCGGTCACTACTCTTGTGACCTCCCAACGTCTAAACCCAAATCCGTCGACCCCTTTTTCTTCAGCTCC
CACCCGACCTCTCAATCCCTATGTTCCCATGTTTGCCTCTGGCCTTCACACTAGGTTTCTTCAAAACCCTAGTCTAACCTCTATTCCTTTGAATCCGTCAACTCCAGTGG
GAGTTGTTTACGAGTCTTCTTCTGCGGCTAGAATCATGGGTCTTCGCTCACAACTTCAAAAGTTTAGGAAGGATGTATTATCTGTGTCTCAATACCTTGCCCAAATCAAA
GACATTACGGATAAGTTCTCAGCCATCGGTGAGCCCCTGTCCTATCGCGATCACTTAGCATACATACTAGAAGGGCTTGGTGTTGGGAGTGCGACCAAAGTCCCACATCG
GCTAGATAAGGGGATGACCATGGGTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGGTGTGTCTTATCTTCTAGTTCTACGACAGCTACTCCGGTCACTACTCTTGTGACCTCCCAACGTCTAAACCCAAATCCGTCGACCCCTTTTTCTTCAGCTCC
CACCCGACCTCTCAATCCCTATGTTCCCATGTTTGCCTCTGGCCTTCACACTAGGTTTCTTCAAAACCCTAGTCTAACCTCTATTCCTTTGAATCCGTCAACTCCAGTGG
GAGTTGTTTACGAGTCTTCTTCTGCGGCTAGAATCATGGGTCTTCGCTCACAACTTCAAAAGTTTAGGAAGGATGTATTATCTGTGTCTCAATACCTTGCCCAAATCAAA
GACATTACGGATAAGTTCTCAGCCATCGGTGAGCCCCTGTCCTATCGCGATCACTTAGCATACATACTAGAAGGGCTTGGTGTTGGGAGTGCGACCAAAGTCCCACATCG
GCTAGATAAGGGGATGACCATGGGTTTATAA
Protein sequenceShow/hide protein sequence
MIRCVLSSSSTTATPVTTLVTSQRLNPNPSTPFSSAPTRPLNPYVPMFASGLHTRFLQNPSLTSIPLNPSTPVGVVYESSSAARIMGLRSQLQKFRKDVLSVSQYLAQIK
DITDKFSAIGEPLSYRDHLAYILEGLGVGSATKVPHRLDKGMTMGL